Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 3.3e-108 395.2 222 100.0
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.5e-63 246.1 184 73.4
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 4.2e-63 245.4 218 65.1
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.6e-62 243.4 176 72.2
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 2.1e-62 243.0 185 70.8
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 4.7e-62 241.9 227 61.2
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 6.1e-62 241.5 184 71.7
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 1.0e-61 240.7 166 76.5
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 2.3e-61 239.6 175 72.6
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 3.0e-61 239.2 201 66.2
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 4.0e-61 238.8 214 64.5
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 4.0e-61 238.8 186 68.8
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 5.2e-61 238.4 184 71.2
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 6.8e-61 238.0 184 69.6
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 1.2e-60 237.3 170 74.7
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.0e-60 236.5 174 73.0
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.0e-60 236.5 182 69.8
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 2.0e-60 236.5 186 72.0
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 2.6e-60 236.1 184 69.0
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 2.6e-60 236.1 174 74.1
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 3.4e-60 235.7 178 69.7
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 9.8e-60 234.2 182 68.7
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 9.8e-60 234.2 182 67.0
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 9.8e-60 234.2 169 72.8
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.7e-59 233.4 185 65.9
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.7e-59 233.4 166 75.3
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 2.2e-59 233.0 161 77.0
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.2e-59 233.0 174 72.4
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 2.2e-59 233.0 174 72.4
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.8e-59 232.6 197 65.0
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 2.8e-59 232.6 174 73.6
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 2.8e-59 232.6 169 72.8
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 3.7e-59 232.3 178 67.4
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 3.7e-59 232.3 222 59.9
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.7e-59 232.3 184 67.4
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.4e-58 230.3 147 76.2
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.4e-58 230.3 171 70.2
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.8e-58 229.9 177 70.6
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 2.4e-58 229.6 152 74.3
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 2.4e-58 229.6 169 70.4
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 3.1e-58 229.2 152 74.3
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 3.1e-58 229.2 152 74.3
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 3.1e-58 229.2 152 74.3
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 3.1e-58 229.2 152 74.3
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 3.1e-58 229.2 224 60.7
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 4.1e-58 228.8 152 75.0
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 4.1e-58 228.8 152 75.0
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 4.1e-58 228.8 152 75.0
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 4.1e-58 228.8 176 70.5
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 4.1e-58 228.8 203 65.0
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 5.4e-58 228.4 209 63.6
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 5.4e-58 228.4 213 61.0
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 7.0e-58 228.0 165 73.3
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 7.0e-58 228.0 203 64.5
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 7.0e-58 228.0 180 67.8
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 9.2e-58 227.6 152 74.3
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 9.2e-58 227.6 155 75.5
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.6e-57 226.9 166 71.7
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.0e-57 226.5 154 75.3
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 3.5e-57 225.7 154 75.3
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 3.5e-57 225.7 209 62.2
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 4.5e-57 225.3 182 63.2
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 4.5e-57 225.3 245 55.1
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 4.5e-57 225.3 161 70.8
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 4.5e-57 225.3 190 65.8
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.0e-56 224.2 181 62.4
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 1.7e-56 223.4 163 70.6
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.7e-56 223.4 153 72.5
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 3.8e-56 222.2 153 73.2
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 3.8e-56 222.2 165 68.5
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.8e-56 222.2 173 66.5
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 5.0e-56 221.9 173 69.9
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 8.6e-56 221.1 188 62.8
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.5e-55 220.3 153 72.5
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.5e-55 220.3 146 76.7
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 2.5e-55 219.5 152 71.1
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 2.5e-55 219.5 155 74.2
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 4.3e-55 218.8 182 63.2
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 9.5e-55 217.6 182 64.3
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 1.6e-54 216.9 161 71.4
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 3.6e-54 215.7 166 69.9
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 3.6e-54 215.7 219 57.5
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 4.7e-54 215.3 208 61.5
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 6.1e-54 214.9 198 61.6
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.0e-53 214.2 197 61.4
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 3.0e-53 212.6 185 61.6
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 3.0e-53 212.6 185 61.6
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.0e-53 212.2 148 74.3
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 6.8e-53 211.5 167 64.1
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 1.2e-52 210.7 202 60.9
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.3e-51 207.2 188 60.6
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 3.7e-51 205.7 167 62.3
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 4.9e-51 205.3 175 63.4
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 6.4e-51 204.9 181 63.0
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 8.3e-51 204.5 171 66.7
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 1.8e-50 203.4 137 72.3
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 7.0e-50 201.4 173 65.9
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 4.6e-49 198.7 169 68.0
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.3e-48 197.2 182 60.4
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 3.0e-48 196.1 178 60.1
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 8.6e-48 194.5 137 70.1
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 1.9e-47 193.4 156 62.8
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 3.6e-46 189.1 131 72.5
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 1.0e-45 187.6 131 74.0
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.4e-45 187.2 149 69.1
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.8e-45 186.8 130 73.1
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.1e-45 186.0 129 74.4
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 1.2e-44 184.1 161 59.0
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 7.5e-44 181.4 117 79.5
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 1.4e-42 177.2 188 58.0
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 1.4e-42 177.2 130 70.8
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 7.0e-42 174.9 157 58.6
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 3.0e-40 169.5 150 58.7
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 9.5e-39 164.5 176 54.5
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.6e-38 163.7 132 62.9
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 8.1e-38 161.4 166 54.2
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.8e-37 160.2 152 57.9
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 5.2e-37 158.7 129 65.9
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 5.8e-36 155.2 108 74.1
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 5.8e-36 155.2 160 56.2
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.9e-27 126.3 148 52.7
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 3.8e-27 125.9 72 76.4
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.5e-25 119.4 162 47.5
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.5e-25 119.4 65 81.5
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 4.9e-19 99.0 133 47.4
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 2.1e-17 93.6 100 54.0
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 9.9e-12 74.7 104 42.3
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.3e-11 74.3 216 34.7
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 4.9e-11 72.4 83 49.4
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 2.5e-07 60.1 69 49.3


User provided reference genes

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