Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.0e-167 595.1 761 100.0
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-94 352.4 217 84.8
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.4e-89 334.7 792 75.0
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.7e-74 285.4 185 82.7
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-73 282.7 740 84.2
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-73 282.7 740 84.2
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.7e-69 267.7 203 74.4
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.5e-67 262.3 180 77.2
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 5.8e-67 260.4 204 68.1
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 5.5e-65 253.8 204 66.7
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 5.7e-62 243.8 205 63.9
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.3e-61 242.7 229 58.1
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 6.3e-61 240.4 205 62.9
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 6.3e-61 240.4 205 63.9
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 5.3e-60 237.3 205 62.4
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 1.7e-58 232.3 202 62.9
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 1.1e-57 229.6 204 60.3
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 1.9e-57 228.8 200 63.0
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 1.9e-57 228.8 220 59.5
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 5.5e-57 227.3 206 60.2
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 9.4e-57 226.5 203 59.6
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 2.1e-56 225.3 202 62.4
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 1.8e-55 222.2 205 59.0
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 2.0e-54 218.8 208 58.2
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 2.5e-54 218.4 185 63.8
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 3.3e-54 218.0 199 62.8
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 2.8e-53 214.9 211 56.4
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 1.4e-52 212.6 204 57.4
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 5.3e-52 210.7 205 55.6
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.2e-51 209.5 197 58.4
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.2e-51 209.5 197 58.4
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 1.2e-51 209.5 206 55.8
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.5e-51 209.1 202 55.4
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.4e-51 208.0 195 57.4
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 5.9e-51 207.2 196 57.7
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.7e-51 206.8 185 66.5
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.7e-50 205.7 195 57.9
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 2.2e-50 205.3 199 59.3
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 3.8e-50 204.5 202 55.4
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 6.5e-50 203.8 200 54.5
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 6.5e-50 203.8 179 63.1
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 8.5e-50 203.4 202 55.0
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.4e-49 202.6 130 79.2
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 1.4e-49 202.6 199 56.8
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 1.9e-49 202.2 198 53.0
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 2.5e-49 201.8 204 54.4
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 4.2e-49 201.1 205 54.6
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 5.5e-49 200.7 206 55.3
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 7.2e-49 200.3 185 57.8
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 1.6e-48 199.1 203 57.1
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 1.6e-48 199.1 204 55.9
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 3.6e-48 198.0 205 55.6
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 4.7e-48 197.6 200 54.5
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 2.3e-47 195.3 206 55.3
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 3.0e-47 194.9 200 52.5
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 3.0e-47 194.9 176 59.1
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 3.0e-47 194.9 176 59.1
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 1.5e-46 192.6 200 56.0
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 7.4e-46 190.3 247 46.6
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 1.3e-45 189.5 198 55.6
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 1.3e-45 189.5 177 58.2
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 1.7e-45 189.1 195 54.4
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 2.2e-45 188.7 202 55.0
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 2.8e-45 188.3 199 52.8
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 3.7e-45 188.0 204 53.9
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.8e-45 187.6 123 82.1
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 1.4e-44 186.0 205 51.7
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 5.3e-44 184.1 181 56.4
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 5.3e-44 184.1 203 49.3
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 2.6e-43 181.8 213 51.2
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 5.9e-43 180.6 206 51.9
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 5.9e-43 180.6 209 50.7
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 7.7e-43 180.3 196 51.0
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 1.0e-42 179.9 180 58.9
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 2.9e-42 178.3 180 55.0
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 2.9e-42 178.3 207 51.7
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 2.5e-41 175.3 210 49.0
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 9.4e-41 173.3 212 49.1
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 2.1e-40 172.2 206 49.5
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 6.1e-40 170.6 208 49.5
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 1.4e-39 169.5 117 72.6
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 6.7e-39 167.2 122 68.9
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 1.1e-38 166.4 153 58.2
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 2.0e-38 165.6 123 69.1
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 2.6e-38 165.2 160 57.5
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 7.5e-38 163.7 164 53.7
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.3e-37 162.9 200 49.0
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 1.3e-37 162.9 204 48.5
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 3.1e-36 158.3 113 70.8
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 1.7e-34 152.5 195 49.7
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 2.2e-34 152.1 107 69.2
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 4.7e-32 144.4 174 50.0
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 4.0e-31 141.4 160 48.8
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 2.2e-29 135.6 180 46.1
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 3.7e-29 134.8 180 47.2
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 1.1e-28 133.3 176 48.3
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 1.1e-28 133.3 212 42.0
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 9.1e-28 130.2 179 45.3
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 3.8e-26 124.8 169 47.3
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 8.5e-26 123.6 171 46.2
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 8.5e-26 123.6 171 46.2
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 8.5e-26 123.6 165 49.7
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 1.5e-25 122.9 175 43.4
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.9e-25 122.5 139 51.8
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 2.5e-25 122.1 157 48.4
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 1.0e-23 116.7 128 53.1
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 2.3e-23 115.5 174 40.8
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 8.8e-23 113.6 174 38.5
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 5.7e-22 110.9 171 43.3
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 7.5e-22 110.5 157 49.0
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 7.5e-22 110.5 168 42.3
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 1.7e-21 109.4 169 40.8
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 2.2e-21 109.0 126 47.6
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 5.4e-20 104.4 131 45.0
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 1.6e-19 102.8 111 52.3
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 2.0e-19 102.4 143 48.3
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 2.7e-19 102.1 179 33.5
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.1e-17 96.7 169 40.2
CsaV3_4G036480 Cucumis sativus L. HOM05D006008 ORTHO05D007334 1.9e-17 95.9 150 34.0
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 3.3e-17 95.1 141 39.0
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 2.1e-16 92.4 136 37.5
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 1.4e-15 89.7 159 32.7
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 2.3e-15 89.0 178 34.8
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 2.3e-15 89.0 157 33.1
Lalb_Chr23g0268191 Lupinus albus HOM05D006008 ORTHO05D007334 4.0e-15 88.2 159 33.3
Nn7g36096 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.2e-14 86.7 118 39.0
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.5e-09 69.7 130 35.4
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 9.5e-09 67.0 100 43.0
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 4.0e-07 61.6 108 31.5
HPP92_017173 Vanilla planifolia HOM05D006008 ORTHO05D007334 1.2e-06 60.1 96 34.4


User provided reference genes

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