Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 6.5e-191 670.6 353 100.0
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.4e-187 657.9 353 98.0
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 1.3e-119 433.7 352 67.9
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.4e-108 396.4 393 58.0
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 8.7e-95 351.3 497 45.5
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.9e-89 333.6 355 53.8
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 6.7e-87 325.1 358 55.0
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.7e-82 310.5 355 53.2
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.1e-81 307.8 357 52.7
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 4.2e-81 305.8 357 53.2
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 4.2e-81 305.8 363 50.4
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 6.1e-80 302.0 363 52.6
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 6.7e-79 298.5 364 50.8
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 6.7e-79 298.5 357 51.8
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.0e-78 297.0 364 51.1
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 7.4e-78 295.0 549 39.0
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.3e-77 294.3 357 50.7
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 2.2e-77 293.5 359 51.0
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 2.2e-77 293.5 364 50.8
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.4e-76 290.8 357 50.7
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.4e-76 290.0 399 46.1
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 5.3e-76 288.9 347 51.3
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 2.6e-75 286.6 351 51.3
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 2.6e-75 286.6 356 48.6
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.0e-74 284.6 359 50.4
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 5.0e-74 282.3 376 45.5
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 6.5e-74 282.0 354 48.9
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 9.4e-73 278.1 378 48.1
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 2.7e-72 276.6 390 44.9
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 2.6e-70 270.0 281 59.1
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.6e-67 260.0 362 46.4
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.5e-66 255.4 383 45.7
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 6.5e-66 255.4 362 43.6
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 6.5e-66 255.4 224 59.8
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.5e-65 254.2 358 48.0
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.5e-65 254.2 178 72.5
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.9e-65 253.8 372 48.4
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 2.5e-65 253.4 357 49.6
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.7e-64 249.2 265 57.4
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 2.3e-63 246.9 341 46.0
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.2e-62 244.6 365 45.5
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 4.4e-62 242.7 356 44.9
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 7.5e-62 241.9 354 42.4
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 9.7e-62 241.5 356 42.7
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 9.7e-62 241.5 351 42.5
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.3e-61 241.1 391 41.7
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 1.3e-61 241.1 363 45.7
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.7e-61 240.7 358 42.7
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.7e-61 240.7 352 42.3
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.4e-60 237.7 352 43.8
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 9.1e-60 235.0 263 52.9
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.2e-59 234.6 330 45.8
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.6e-59 234.2 358 45.0
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.7e-59 233.4 376 41.8
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 1.0e-58 231.5 358 42.2
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 1.3e-58 231.1 350 41.1
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 1.3e-58 231.1 359 44.0
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 2.9e-58 229.9 349 42.7
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 6.5e-58 228.8 353 42.8
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.1e-57 228.0 374 41.2
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 1.1e-57 228.0 360 43.6
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 1.1e-57 228.0 204 58.3
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 7.2e-57 225.3 354 43.8
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.6e-56 224.2 401 38.7
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 2.1e-56 223.8 375 39.7
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 6.1e-56 222.2 367 41.4
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 1.8e-55 220.7 261 47.9
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.3e-55 220.3 374 38.2
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 5.2e-55 219.2 323 39.9
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 5.2e-55 219.2 270 48.5
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 5.2e-55 219.2 354 43.5
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.0e-54 217.2 229 54.1
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 4.4e-54 216.1 345 40.6
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 9.8e-54 214.9 410 37.3
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.3e-53 214.5 374 37.7
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 1.8e-52 210.7 229 52.4
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 2.4e-52 210.3 202 53.5
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 2.4e-52 210.3 379 40.4
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.4e-52 210.3 164 64.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 4.1e-52 209.5 384 37.5
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 4.1e-52 209.5 215 50.2
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 1.2e-51 208.0 364 38.2
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.2e-51 208.0 337 41.8
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.6e-51 207.6 382 37.7
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 1.6e-51 207.6 361 41.0
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 1.6e-51 207.6 166 59.0
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.5e-51 206.5 333 42.6
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.3e-50 204.5 368 37.8
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.7e-50 204.1 398 37.9
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 6.5e-50 202.2 202 54.0
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 6.5e-50 202.2 193 58.5
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.1e-49 201.4 383 40.2
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 2.5e-49 200.3 169 55.6
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 3.2e-49 199.9 413 38.5
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 7.5e-46 188.7 215 51.2
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 4.1e-44 183.0 121 76.0
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.6e-43 181.0 387 36.4
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.2e-40 171.4 236 48.7
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 1.2e-40 171.4 163 58.3
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.1e-36 158.3 263 41.4
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.6e-32 144.4 175 41.7
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 4.4e-30 136.3 135 49.6
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 3.7e-29 133.3 258 39.9
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 1.9e-28 131.0 128 46.9
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 2.3e-23 114.0 96 57.3
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 5.2e-23 112.8 245 31.0
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 3.4e-22 110.2 169 34.9
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 8.9e-15 85.5 85 44.7
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 4.9e-13 79.7 188 28.2
MSTRG.15811 Avicennia marina HOM05D006765 ORTHO05D008554 3.5e-11 73.6 209 32.5
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 4.7e-08 63.2 64 54.7
Cc00_g31880 Coffea canephora HOM05D006765 ORTHO05D008554 2.0e-06 57.8 133 34.6
MD03G1037100 Malus domestica HOM05D006765 ORTHO05D008554 2.0e-06 57.8 276 28.3


User provided reference genes

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