Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 2.0e-67 259.6 207 100.0
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 5.1e-18 95.5 194 57.7
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 1.9e-12 77.0 204 41.2
Hma1.2p1_0111F.1_g053570 Hydrangea macrophylla HOM05D007476 ORTHO05D006998 5.4e-12 75.5 208 55.3
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 1.6e-11 73.9 191 47.6
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 4.6e-11 72.4 208 46.6
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 7.8e-11 71.6 195 48.2
Actinidia13115 Actinidia chinensis HOM05D007476 ORTHO05D006998 1.0e-10 71.2 201 55.2
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 2.3e-10 70.1 188 50.0
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 2.3e-10 70.1 186 51.1
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 3.0e-10 69.7 202 48.5
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 3.0e-10 69.7 122 63.9
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 5.1e-10 68.9 186 49.5
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 6.6e-10 68.6 222 47.7
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 3.3e-09 66.2 134 60.4
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 1.6e-08 63.9 155 50.3
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 2.8e-08 63.2 221 49.8
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 3.6e-08 62.8 141 55.3
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 6.2e-08 62.0 181 48.1
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 1.1e-07 61.2 207 39.6
Actinidia11227 Actinidia chinensis HOM05D007476 ORTHO05D006998 1.8e-07 60.5 194 53.1
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 2.4e-07 60.1 195 46.2
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 3.1e-07 59.7 76 48.7
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 4.0e-07 59.3 188 50.0
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 5.3e-07 58.9 185 42.2
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 5.3e-07 58.9 192 50.5
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 6.9e-07 58.5 185 42.2
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 1.2e-06 57.8 205 49.8
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 1.2e-06 57.8 197 49.7
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 1.2e-06 57.8 201 50.2
Actinidia19729 Actinidia chinensis HOM05D007476 ORTHO05D006998 3.4e-06 56.2 62 72.6
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.4e-06 56.2 98 40.8
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.4e-06 56.2 186 47.8
Lalb_Chr25g0289331 Lupinus albus HOM05D007476 ORTHO05D006998 3.4e-06 56.2 161 52.8
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 5.8e-06 55.5 175 43.4
Aqoxy4G03119 Aquilegia oxysepala HOM05D007476 ORTHO05D006998 9.9e-06 54.7 50 68.0


User provided reference genes

Program Settings