Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.0e-132 476.9 266 100.0
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.2e-130 469.2 266 95.5
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.9e-86 323.2 271 64.6
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.3e-84 316.2 269 64.7
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 6.8e-84 314.7 280 65.0
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 2.0e-83 313.2 271 63.5
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 3.4e-83 312.4 269 69.1
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.3e-82 310.5 267 63.3
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.7e-82 310.1 270 65.2
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.6e-80 303.5 275 68.7
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 2.1e-80 303.1 272 64.7
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 1.0e-79 300.8 273 66.3
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 6.6e-79 298.1 273 64.1
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 1.1e-78 297.4 268 64.6
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 2.5e-78 296.2 187 78.6
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 3.3e-78 295.8 267 58.8
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 3.3e-78 295.8 244 70.1
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 4.3e-78 295.4 273 65.2
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 1.2e-77 293.9 200 74.5
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 2.8e-77 292.7 200 72.5
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.8e-76 290.0 270 57.8
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 2.4e-76 289.7 271 66.4
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 8.9e-76 287.7 272 61.0
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.2e-75 287.3 269 64.7
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 2.0e-75 286.6 268 67.2
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 2.0e-75 286.6 266 62.0
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 2.6e-75 286.2 273 58.6
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 4.4e-75 285.4 270 64.1
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 4.4e-75 285.4 270 64.1
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 7.6e-75 284.6 281 56.2
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 7.6e-75 284.6 272 60.7
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 9.9e-75 284.3 275 61.1
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.9e-74 282.7 269 66.2
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 6.4e-74 281.6 271 66.4
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 2.4e-73 279.6 200 72.0
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 2.4e-73 279.6 266 64.7
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 4.1e-73 278.9 275 57.5
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 1.2e-72 277.3 272 60.3
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.5e-72 275.8 198 69.7
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 3.5e-72 275.8 198 69.7
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.5e-72 275.8 198 69.7
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 3.5e-72 275.8 273 57.5
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 7.8e-72 274.6 229 67.2
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.3e-71 273.9 270 57.0
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 1.7e-71 273.5 277 54.2
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 2.3e-71 273.1 258 64.0
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 3.9e-71 272.3 277 54.2
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 3.9e-71 272.3 187 72.2
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 3.9e-71 272.3 226 64.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 6.6e-71 271.6 246 61.8
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 6.6e-71 271.6 201 68.7
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 1.9e-70 270.0 268 60.4
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 2.5e-70 269.6 269 59.1
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 7.3e-70 268.1 288 61.5
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 4.7e-69 265.4 309 57.3
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.8e-68 263.5 182 72.5
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 6.9e-68 261.5 270 60.4
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 9.0e-68 261.2 202 67.3
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 1.2e-67 260.8 271 60.9
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.2e-67 260.8 270 58.1
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.5e-67 260.4 242 62.8
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 1.5e-67 260.4 196 71.4
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 1.5e-67 260.4 269 60.6
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.5e-67 260.4 279 58.1
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 2.0e-67 260.0 227 69.2
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 2.6e-67 259.6 210 67.6
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 4.4e-67 258.8 194 67.5
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 7.6e-67 258.1 209 67.5
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.9e-66 256.1 278 60.8
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 3.8e-66 255.8 266 59.0
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 3.8e-66 255.8 272 60.3
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 4.9e-66 255.4 270 61.9
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 6.4e-66 255.0 200 65.0
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 6.4e-66 255.0 256 55.9
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 1.4e-65 253.8 265 57.0
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 4.2e-65 252.3 282 53.2
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 6.0e-64 248.4 283 55.8
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.0e-63 247.7 156 76.9
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 1.0e-63 247.7 162 73.5
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 3.0e-63 246.1 269 56.5
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 3.9e-63 245.7 261 56.7
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.1e-62 244.2 198 64.1
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 1.9e-62 243.4 266 54.9
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 7.3e-62 241.5 194 60.8
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.3e-61 240.7 268 51.1
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 1.6e-61 240.4 276 57.2
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 2.1e-61 240.0 205 60.5
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.4e-60 237.3 225 58.7
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 1.8e-60 236.9 265 50.6
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 2.4e-60 236.5 289 49.8
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-59 234.2 271 53.9
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-59 234.2 267 52.8
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 1.2e-59 234.2 267 52.8
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 1.2e-59 234.2 267 52.8
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 3.8e-58 229.2 204 59.3
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 3.8e-58 229.2 235 54.5
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 6.4e-58 228.4 267 50.9
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 6.4e-58 228.4 200 62.5
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 8.4e-58 228.0 267 50.6
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 1.1e-57 227.6 267 51.7
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 1.4e-57 227.3 256 55.1
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 1.9e-57 226.9 267 50.6
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.4e-57 226.5 216 57.4
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 3.2e-57 226.1 196 60.2
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 1.6e-56 223.8 268 52.2
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 2.1e-56 223.4 200 57.0
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 7.9e-56 221.5 274 52.9
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 1.8e-52 210.3 152 63.8
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 6.7e-47 191.8 267 46.1
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.1e-44 184.5 157 56.7
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 3.1e-44 183.0 157 56.7
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 4.0e-44 182.6 157 54.8
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 6.9e-44 181.8 157 54.8
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 6.9e-44 181.8 170 52.9
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 5.8e-43 178.7 275 48.7
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 2.5e-38 163.3 144 56.9
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.3e-37 161.0 211 42.7
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 1.4e-36 157.5 153 51.0
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 6.1e-32 142.1 155 44.5
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.5e-30 137.5 189 41.3
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 5.3e-28 129.0 121 58.7
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 1.7e-26 124.0 109 59.6


User provided reference genes

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