Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046301 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.9e-90 335.1 159 100.0
CSS0015985 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.6e-54 215.7 162 72.2
CSS0029311 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.6e-54 215.7 162 72.2
Actinidia35339 Actinidia chinensis HOM05D005753 ORTHO05D007034 4.6e-51 204.9 146 69.9
Dinv22267 Davidia involucrata HOM05D005753 ORTHO05D007034 5.0e-50 201.4 147 72.8
Actinidia10731 Actinidia chinensis HOM05D005753 ORTHO05D007034 7.3e-49 197.6 153 66.7
RhsimUnG0251100 Rhododendron simsii HOM05D005753 ORTHO05D007034 2.1e-48 196.1 145 71.0
TAR629G3535 Trochodendron aralioides HOM05D005753 ORTHO05D007034 4.0e-47 191.8 157 68.2
vmacro09719 Vaccinium macrocarpon HOM05D005753 ORTHO05D007034 2.0e-46 189.5 145 69.0
GSVIVG01037637001 Vitis vinifera HOM05D005753 ORTHO05D007034 6.0e-43 177.9 147 65.3
Nn1g03551 Nelumbo nucifera HOM05D005753 ORTHO05D007034 1.3e-42 176.8 149 63.1
QL08p010535 Quercus lobata HOM05D005753 ORTHO05D007034 1.5e-41 173.3 148 61.5
Potri.011G138600 Populus trichocarpa HOM05D005753 ORTHO05D007034 4.7e-40 168.3 146 60.3
Dinv40749 Davidia involucrata HOM05D005753 ORTHO05D007034 6.2e-40 167.9 147 65.3
Potri.001G423200 Populus trichocarpa HOM05D005753 ORTHO05D007034 6.8e-39 164.5 149 59.1
Duzib213G1063 Durio zibethinus HOM05D005753 ORTHO05D007034 2.9e-37 159.1 155 58.7
Peaxi162Scf00964g00029 Petunia axillaris HOM05D005753 ORTHO05D007034 3.7e-37 158.7 138 62.3
Thecc.07G038900 Theobroma cacao HOM05D005753 ORTHO05D007034 8.3e-37 157.5 152 57.9
Haze_09667 Corylus avellana HOM05D005753 ORTHO05D007034 1.1e-36 157.1 152 57.9
Gorai.009G437800 Gossypium raimondii HOM05D005753 ORTHO05D007034 3.2e-36 155.6 155 56.8
Gohir.D05G369100 Gossypium hirsutum HOM05D005753 ORTHO05D007034 9.2e-36 154.1 146 58.2
Nitab4.5_0001913g0030 Nicotiana tabacum HOM05D005753 ORTHO05D007034 9.2e-36 154.1 144 57.6
Ciclev10007877m.g Citrus clementina HOM05D005753 ORTHO05D007034 2.1e-35 152.9 157 58.0
Gohir.A04G017100 Gossypium hirsutum HOM05D005753 ORTHO05D007034 2.7e-35 152.5 149 57.7
Atru.chr2.3344 Acer truncatum HOM05D005753 ORTHO05D007034 3.5e-35 152.1 148 55.4
Manes.15G072600 Manihot esculenta HOM05D005753 ORTHO05D007034 7.8e-35 151.0 157 54.8
Lsat_1_v5_gn_7_108641 Lactuca sativa HOM05D005753 ORTHO05D007034 1.0e-34 150.6 151 50.3
PGSC0003DMG400022322 Solanum tuberosum HOM05D005753 ORTHO05D007034 1.0e-34 150.6 144 56.9
DCAR_022557 Daucus carota HOM05D005753 ORTHO05D007034 1.3e-34 150.2 146 57.5
Cfa020355 Carpinus fangiana HOM05D005753 ORTHO05D007034 2.3e-34 149.4 152 56.6
TWI38G0917 Tripterygium wilfordii HOM05D005753 ORTHO05D007034 5.1e-34 148.3 156 52.6
COL.COLO4_09655 Corchorus olitorius HOM05D005753 ORTHO05D007034 1.1e-33 147.1 143 57.3
ECA236G0832 Erigeron canadensis HOM05D005753 ORTHO05D007034 1.1e-33 147.1 147 53.1
TWI38G1056 Tripterygium wilfordii HOM05D005753 ORTHO05D007034 1.9e-33 146.4 156 52.6
Migut.M01771 Erythranthe guttata HOM05D005753 ORTHO05D007034 3.3e-33 145.6 144 52.1
ClCG10G005460 Citrullus lanatus HOM05D005753 ORTHO05D007034 7.3e-33 144.4 156 50.6
Sabra16G0289400 Salix brachista HOM05D005753 ORTHO05D007034 2.1e-32 142.9 151 52.3
Sopen07g032730 Solanum pennellii HOM05D005753 ORTHO05D007034 2.8e-32 142.5 145 55.2
CsaV3_3G005190 Cucumis sativus L. HOM05D005753 ORTHO05D007034 4.7e-32 141.7 156 50.0
Manes.03G128700 Manihot esculenta HOM05D005753 ORTHO05D007034 6.2e-32 141.4 142 54.9
Solyc07g064550.3 Solanum lycopersicum HOM05D005753 ORTHO05D007034 6.2e-32 141.4 145 54.5
Aqoxy4G01822 Aquilegia oxysepala HOM05D005753 ORTHO05D007034 5.2e-31 138.3 150 54.0
Cc05_g13740 Coffea canephora HOM05D005753 ORTHO05D007034 1.2e-30 137.1 144 52.1
Oeu007583.4 Olea europaea HOM05D005753 ORTHO05D007034 7.6e-30 134.4 151 54.3
CiPaw.11G188600 Carya illinoinensis HOM05D005753 ORTHO05D007034 2.2e-29 132.9 153 51.0
Duzib170G0684 Durio zibethinus HOM05D005753 ORTHO05D007034 3.7e-29 132.1 155 51.0
MD03G1202100 Malus domestica HOM05D005753 ORTHO05D007034 3.7e-29 132.1 127 55.1
CAN.G337.126 Capsicum annuum HOM05D005753 ORTHO05D007034 4.9e-29 131.7 143 51.7
RcHm_v2.0_Chr5g0039281 Rosa chinensis HOM05D005753 ORTHO05D007034 6.4e-29 131.3 127 55.1
HanXRQChr16g0515041 Helianthus annuus HOM05D005753 ORTHO05D007034 8.4e-29 131.0 144 49.3
Prupe.4G211900 Prunus persica HOM05D005753 ORTHO05D007034 1.1e-28 130.6 127 54.3
PSO832G3698 Papaver somniferum HOM05D005753 ORTHO05D007034 1.4e-28 130.2 146 50.0
Sed0020363 Sechium edule HOM05D005753 ORTHO05D007034 2.4e-28 129.4 160 47.5
MBI02_g22112_MAGBIO Magnolia biondii HOM05D005753 ORTHO05D007034 1.6e-27 126.7 122 53.3
CANSAT78G0206 Cannabis sativa HOM05D005753 ORTHO05D007034 2.1e-27 126.3 145 50.3
MSTRG.15152 Avicennia marina HOM05D005753 ORTHO05D007034 3.5e-27 125.6 143 49.0
FAN16G1141 Fragaria x ananassa HOM05D005753 ORTHO05D007034 6.0e-27 124.8 127 54.3
Lj1A871G90 Lonicera japonica HOM05D005753 ORTHO05D007034 6.0e-27 124.8 87 66.7
Sabra11G0124200 Salix brachista HOM05D005753 ORTHO05D007034 3.0e-26 122.5 135 49.6
FAN21G2493 Fragaria x ananassa HOM05D005753 ORTHO05D007034 3.9e-26 122.1 127 53.5
FAN25G0533 Fragaria x ananassa HOM05D005753 ORTHO05D007034 5.1e-26 121.7 127 52.8
FvH4_3g22540 Fragaria vesca HOM05D005753 ORTHO05D007034 1.5e-25 120.2 127 52.8
FAN11G3996 Fragaria x ananassa HOM05D005753 ORTHO05D007034 1.5e-25 120.2 127 52.8
Glyma.18G099000 Glycine max HOM05D005753 ORTHO05D007034 4.3e-25 118.6 154 46.8
MELO3C025386.2 Cucumis melo HOM05D005753 ORTHO05D007034 2.1e-24 116.3 202 38.6
HanXRQChr15g0494351 Helianthus annuus HOM05D005753 ORTHO05D007034 3.6e-24 115.5 145 46.2
Sc07g0002780 Simmondsia chinensis HOM05D005753 ORTHO05D007034 6.8e-23 111.3 147 49.0
Nitab4.5_0003812g0080 Nicotiana tabacum HOM05D005753 ORTHO05D004173 8.9e-23 110.9 87 60.9
arahy.Tifrunner.gnm1.ann1.2B36BL Arachis hypogaea HOM05D005753 ORTHO05D007034 1.2e-22 110.5 155 43.9
arahy.Tifrunner.gnm1.ann1.F03U7D Arachis hypogaea HOM05D005753 ORTHO05D007034 1.2e-22 110.5 155 43.9
Lalb_Chr15g0081011 Lupinus albus HOM05D005753 ORTHO05D007034 7.6e-22 107.8 146 42.5
AL8G30390 Arabidopsis lyrata HOM05D005753 ORTHO05D007034 1.7e-21 106.7 145 44.1
THA.LOC104818102 Tarenaya hassleriana HOM05D005753 ORTHO05D007034 1.7e-21 106.7 147 41.5
Ca_14723_v3 Cicer arietinum L. HOM05D005753 ORTHO05D007034 3.8e-21 105.5 155 45.8
AT5G54920 Arabidopsis thaliana HOM05D005753 ORTHO05D007034 4.9e-21 105.1 145 42.8
Eucgr.F00770 Eucalyptus grandis HOM05D005753 ORTHO05D007034 1.1e-20 104.0 144 47.2
Aa31LG5G10420 Aethionema arabicum HOM05D005753 ORTHO05D007034 1.9e-20 103.2 147 42.9
Carub.0008s1522 Capsella rubella HOM05D005753 ORTHO05D007034 2.1e-19 99.8 139 42.4
Cpa.g.sc97.11 Carica papaya HOM05D005753 ORTHO05D007034 4.6e-19 98.6 166 39.2
CARHR234600 Cardamine hirsuta HOM05D005753 ORTHO05D007034 7.8e-19 97.8 147 43.5
AUR62015759 Chenopodium quinoa HOM05D005753 ORTHO05D007034 1.0e-18 97.4 151 40.4
PGR083G0792 Punica granatum HOM05D005753 ORTHO05D007034 2.3e-18 96.3 137 43.1
ATR0752G139 Amborella trichopoda HOM05D005753 ORTHO05D007034 3.9e-18 95.5 148 43.9
Thhalv10025144m.g Eutrema salsugineum HOM05D005753 ORTHO05D007034 6.6e-18 94.7 146 40.4
EL10Ac4g07817 Beta vulgaris HOM05D005753 ORTHO05D007034 1.9e-17 93.2 151 41.1
PSO210G3457 Papaver somniferum HOM05D005753 ORTHO05D007034 2.5e-17 92.8 102 50.0
CDE02G1816 Ceratophyllum demersum HOM05D005753 ORTHO05D007034 3.3e-17 92.4 146 38.4
Lj6g0004879 Lotus japonicus HOM05D005753 ORTHO05D007034 9.6e-17 90.9 141 44.0
CARHR268260 Cardamine hirsuta HOM05D005753 ORTHO05D007034 3.6e-16 89.0 142 43.0
Sp7g24940 Schrenkiella parvula HOM05D005753 ORTHO05D007034 3.1e-15 85.9 144 38.9
AT4G26990 Arabidopsis thaliana HOM05D005753 ORTHO05D007034 5.3e-15 85.1 147 40.8
BcaNung03572 Brassica carinata HOM05D005753 ORTHO05D007034 5.3e-15 85.1 148 37.2
A01p18150 Brassica napus HOM05D005753 ORTHO05D007034 9.0e-15 84.3 150 38.0
BraA01t01770Z Brassica rapa HOM05D005753 ORTHO05D007034 9.0e-15 84.3 150 38.0
A03p57000 Brassica napus HOM05D005753 ORTHO05D007034 1.2e-14 84.0 147 38.1
C07p55070 Brassica napus HOM05D005753 ORTHO05D007034 1.2e-14 84.0 149 38.3
AL7G25840 Arabidopsis lyrata HOM05D005753 ORTHO05D007034 3.4e-14 82.4 147 38.8
C01p23110 Brassica napus HOM05D005753 ORTHO05D007034 3.4e-14 82.4 150 37.3
Carub.0007s1385 Capsella rubella HOM05D005753 ORTHO05D007034 5.8e-14 81.6 152 38.8
Thhalv10015348m.g Eutrema salsugineum HOM05D005753 ORTHO05D007034 2.9e-13 79.3 129 38.0
BolC1t02245H Brassica oleracea HOM05D005753 ORTHO05D007034 1.1e-12 77.4 154 36.4
Ah.06g186160 Amaranthus hybridus HOM05D005753 ORTHO05D007034 4.2e-12 75.5 147 38.1
Medtr3g051270 Medicago truncatula HOM05D005753 ORTHO05D007034 4.2e-12 75.5 147 38.8
SEGI_12050 Sequoiadendron giganteum HOM05D003244 ORTHO05D003645 2.1e-11 73.2 143 36.4
Oeu062590.1 Olea europaea HOM05D005753 ORTHO05D007034 4.6e-11 72.0 90 44.4
Os04g0625900 Oryza sativa ssp. japonica HOM05D005753 ORTHO05D007034 6.6e-10 68.2 155 32.3
BcaC06g32718 Brassica carinata HOM05D005753 ORTHO05D007034 9.6e-09 64.3 150 34.7
SGA_v2.0_scaffold74G24678 Striga asiatica HOM05D005753 ORTHO05D007034 9.6e-09 64.3 115 36.5
AUR62020456 Chenopodium quinoa HOM05D005753 ORTHO05D007034 1.6e-08 63.5 151 34.4
Psat5g180520 Pisum sativum HOM05D005753 ORTHO05D007034 2.8e-08 62.8 154 33.8
Psat0s6641g0040 Pisum sativum HOM05D005753 ORTHO05D007034 2.4e-07 59.7 127 35.4
Psat1g183360 Pisum sativum HOM05D005753 ORTHO05D007034 5.3e-07 58.5 127 35.4


User provided reference genes

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