Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.0e-185 651.0 329 100.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.8e-164 582.0 329 92.1
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.4e-141 505.0 328 79.6
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.6e-127 459.9 329 71.1
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 8.1e-127 457.6 331 71.3
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.8e-126 456.4 329 70.8
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 3.4e-125 452.2 329 69.6
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 9.9e-125 450.7 329 68.4
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.7e-124 448.7 331 69.5
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.9e-123 446.4 332 68.7
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.4e-123 446.0 331 69.5
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 3.5e-122 442.2 333 68.8
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 4.6e-122 441.8 330 69.4
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 6.0e-122 441.4 329 68.4
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.0e-121 440.7 332 67.2
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 3.9e-121 438.7 335 69.3
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 5.1e-121 438.3 330 69.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 8.6e-121 437.6 330 67.9
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.6e-119 432.2 330 67.3
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 2.0e-117 426.4 325 68.0
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.4e-117 425.2 330 65.5
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.3e-116 423.7 329 66.9
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 4.9e-116 421.8 330 67.9
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 6.4e-116 421.4 329 65.3
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 8.4e-116 421.0 330 65.2
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.5e-114 415.6 329 65.7
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 3.5e-114 415.6 325 64.9
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.6e-114 415.2 330 65.2
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 2.3e-113 412.9 326 66.3
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.3e-113 412.9 334 64.7
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 8.7e-113 411.0 307 68.7
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 8.7e-113 411.0 335 66.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 8.7e-113 411.0 329 65.7
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.5e-112 410.2 330 63.3
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.9e-112 409.8 325 64.3
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-112 409.5 244 79.9
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.3e-112 408.7 329 65.3
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.3e-112 408.7 328 63.7
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 9.6e-112 407.5 324 63.9
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.1e-110 404.1 244 78.3
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.8e-110 403.3 330 63.3
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 2.4e-110 402.9 395 58.7
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 5.2e-110 401.7 330 62.7
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.0e-109 399.8 288 68.4
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.0e-109 399.8 330 63.0
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 4.4e-109 398.7 331 63.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 4.4e-109 398.7 333 61.0
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.4e-109 398.7 330 62.4
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.7e-108 396.7 338 62.1
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 4.9e-108 395.2 330 61.8
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-107 392.9 332 62.0
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.2e-107 392.1 244 75.8
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 9.3e-107 391.0 331 61.9
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 2.7e-106 389.4 325 62.2
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 3.5e-106 389.0 330 62.7
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 4.6e-106 388.7 330 62.7
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.1e-105 385.2 333 61.0
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.9e-104 383.3 244 72.5
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.9e-104 383.3 245 76.3
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-104 382.9 283 67.8
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.6e-104 381.7 342 59.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.6e-103 380.2 324 61.7
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.8e-103 379.4 324 60.8
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.1e-103 377.9 329 62.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 8.1e-103 377.9 324 59.6
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.4e-102 376.3 329 59.6
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 4.0e-102 375.6 333 57.7
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 4.0e-102 375.6 327 60.2
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.3e-102 375.2 330 60.0
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 9.0e-102 374.4 342 58.5
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.4e-101 372.5 327 59.3
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.4e-101 372.5 331 60.4
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 4.5e-101 372.1 335 58.8
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-100 370.2 331 59.8
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.9e-100 369.4 331 58.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 4.9e-100 368.6 331 60.1
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.1e-99 367.5 291 64.6
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 7.1e-99 364.8 333 57.4
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 2.7e-98 362.8 287 64.1
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 3.5e-98 362.5 230 73.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 2.3e-97 359.8 333 56.8
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.3e-97 359.8 244 72.5
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 3.9e-97 359.0 332 56.6
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 5.6e-96 355.1 336 57.1
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.1e-94 349.4 268 64.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 5.3e-94 348.6 324 57.4
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.6e-93 346.3 331 57.1
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.9e-92 342.8 323 56.3
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 4.2e-91 339.0 289 60.6
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.3e-89 334.0 262 66.0
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 3.3e-88 329.3 306 55.2
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 4.0e-86 322.4 252 61.5
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-85 320.1 332 54.2
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 4.9e-84 315.5 198 78.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.5e-84 315.1 198 78.3
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.5e-80 303.9 348 48.3
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 2.9e-76 289.7 197 70.6
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 5.7e-72 275.4 210 64.8
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-64 251.1 289 48.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.4e-62 244.2 251 53.8
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.3e-60 237.7 155 74.2
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.0e-60 235.7 243 55.1
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.2e-58 231.1 230 53.5
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.0e-57 228.0 248 45.2
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 2.3e-57 226.9 328 44.5
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.4e-54 217.6 192 55.2
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 2.1e-50 203.8 218 52.8
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.0e-48 197.2 178 53.9
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.6e-45 187.6 234 44.9
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 2.7e-42 176.8 194 51.0
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 8.8e-41 171.8 200 45.5
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.1e-38 161.8 101 74.3
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.3e-36 157.9 179 46.9
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 6.6e-36 155.6 146 56.2
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.9e-35 154.1 108 65.7
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 1.2e-34 151.4 178 48.3
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 3.6e-34 149.8 111 63.1
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 5.4e-30 136.0 215 42.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 7.0e-30 135.6 299 35.1
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.5e-27 127.1 256 38.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.5e-24 117.9 71 70.4
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 5.8e-24 115.9 170 42.4
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.2e-22 110.2 77 72.7
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.7e-21 107.1 198 37.9
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.0e-20 105.1 60 86.7
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.3e-20 104.8 306 28.4
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.5e-19 101.3 133 42.9
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 3.3e-19 100.1 66 72.7
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 7.3e-19 99.0 63 73.0
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 9.5e-19 98.6 130 45.4
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 2.1e-18 97.4 115 52.2
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 3.6e-18 96.7 165 36.4
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.8e-17 94.4 101 50.5
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 5.2e-17 92.8 133 42.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.0e-12 78.6 246 27.2
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.1e-11 75.1 57 64.9
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.2e-10 71.6 235 25.5
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.8e-10 70.5 254 24.8
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 4.7e-10 69.7 42 71.4
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 2.3e-09 67.4 270 24.1
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 6.8e-09 65.9 62 50.0
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 2.6e-08 63.9 192 25.5
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 3.4e-08 63.5 33 81.8


User provided reference genes

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