Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046262 Camellia sinensis var. sinensis HOM05D002206 ORTHO05D002219 8.8e-60 233.4 117 100.0
Actinidia39083 Actinidia chinensis HOM05D002206 ORTHO05D002219 1.5e-30 136.3 101 72.3
QL05p008151 Quercus lobata HOM05D002206 ORTHO05D002219 8.0e-29 130.6 101 66.3
Rhsim12G0209300 Rhododendron simsii HOM05D002206 ORTHO05D002219 1.0e-28 130.2 103 70.9
Dinv04034 Davidia involucrata HOM05D002206 ORTHO05D002219 4.0e-28 128.3 99 70.7
vmacro17055 Vaccinium macrocarpon HOM05D002206 ORTHO05D002219 3.4e-27 125.2 104 69.2
Cfa003540 Carpinus fangiana HOM05D002206 ORTHO05D002219 9.8e-27 123.6 100 67.0
Potri.001G170200 Populus trichocarpa HOM05D002206 ORTHO05D002219 3.9e-23 111.7 89 66.3
GSVIVG01016777001 Vitis vinifera HOM05D002206 ORTHO05D002219 5.0e-23 111.3 106 60.4
Nn8g38715 Nelumbo nucifera HOM05D002206 ORTHO05D002219 1.5e-22 109.8 101 61.4
Potri.003G063700 Populus trichocarpa HOM05D002206 ORTHO05D002219 2.5e-22 109.0 107 56.1
Manes.11G021500 Manihot esculenta HOM05D002206 ORTHO05D002219 3.3e-22 108.6 107 57.9
Thecc.06G118700 Theobroma cacao HOM05D002206 ORTHO05D002219 1.2e-21 106.7 88 63.6
MD09G1184800 Malus domestica HOM05D002206 ORTHO05D002219 1.6e-21 106.3 106 60.4
CiPaw.01G219900 Carya illinoinensis HOM05D002206 ORTHO05D002219 2.1e-21 105.9 107 57.0
MD17G1168700 Malus domestica HOM05D002206 ORTHO05D002219 2.1e-21 105.9 106 59.4
Prupe.3G042900 Prunus persica HOM05D002206 ORTHO05D002219 2.1e-21 105.9 88 67.0
TAR624G0441 Trochodendron aralioides HOM05D002206 ORTHO05D002219 2.8e-21 105.5 106 57.5
TWI75G1747 Tripterygium wilfordii HOM05D002206 ORTHO05D002219 3.6e-21 105.1 99 60.6
CANSAT56G1008 Cannabis sativa HOM05D002206 ORTHO05D002219 4.7e-21 104.8 102 59.8
Gohir.A10G053000 Gossypium hirsutum HOM05D002206 ORTHO05D002219 8.0e-21 104.0 106 53.8
Glyma.07G037100 Glycine max HOM05D002206 ORTHO05D002219 1.1e-20 103.6 82 64.6
TAR626G1279 Trochodendron aralioides HOM05D002206 ORTHO05D002219 1.4e-20 103.2 106 57.5
Gohir.D10G054800 Gossypium hirsutum HOM05D002206 ORTHO05D002219 1.8e-20 102.8 106 52.8
Gorai.011G058300 Gossypium raimondii HOM05D002206 ORTHO05D002219 1.8e-20 102.8 106 52.8
Duzib192G0904 Durio zibethinus HOM05D002206 ORTHO05D002219 2.3e-20 102.4 106 53.8
COL.COLO4_30770 Corchorus olitorius HOM05D002206 ORTHO05D002219 5.2e-20 101.3 106 51.9
Atru.chr1.3913_Atru.chr1.3914 Acer truncatum HOM05D002206 ORTHO05D002219 6.8e-20 100.9 88 62.5
Phvul.010G131400 Phaseolus vulgaris HOM05D002206 ORTHO05D002219 6.8e-20 100.9 82 62.2
Psat4g183000 Pisum sativum HOM05D002206 ORTHO05D002219 6.8e-20 100.9 103 54.4
Lj5A38T41 Lonicera japonica HOM05D002206 ORTHO05D002219 8.9e-20 100.5 102 56.9
VMungo0331G1548 Vigna mungo HOM05D002206 ORTHO05D002219 8.9e-20 100.5 82 61.0
Glyma.16G006500 Glycine max HOM05D002206 ORTHO05D002219 1.2e-19 100.1 107 49.5
Oeu007565.1 Olea europaea HOM05D002206 ORTHO05D002219 1.5e-19 99.8 101 56.4
RcHm_v2.0_Chr2g0145091 Rosa chinensis HOM05D002206 ORTHO05D002219 3.4e-19 98.6 88 62.5
TPR.G32506 Trifolium pratense HOM05D002206 ORTHO05D002219 9.8e-19 97.1 103 51.5
Ca_05006_v3 Cicer arietinum L. HOM05D002206 ORTHO05D002219 1.3e-18 96.7 105 54.3
FAN09G1436 Fragaria x ananassa HOM05D002206 ORTHO05D002219 1.7e-18 96.3 94 59.6
Sed0013927 Sechium edule HOM05D002206 ORTHO05D002219 3.7e-18 95.1 116 54.3
FvH4_6g34560 Fragaria vesca HOM05D002206 ORTHO05D002219 4.9e-18 94.7 94 58.5
FAN02G0106 Fragaria x ananassa HOM05D002206 ORTHO05D002219 4.9e-18 94.7 94 58.5
FAN14G4975 Fragaria x ananassa HOM05D002206 ORTHO05D002219 4.9e-18 94.7 94 58.5
Ciclev10025094m.g Citrus clementina HOM05D002206 ORTHO05D002219 1.1e-17 93.6 79 64.6
Lj3g0019571 Lotus japonicus HOM05D002206 ORTHO05D002219 1.1e-17 93.6 82 58.5
Medtr8g020330 Medicago truncatula HOM05D002206 ORTHO05D002219 1.1e-17 93.6 103 52.4
Oeu058722.2 Olea europaea HOM05D002206 ORTHO05D002219 1.1e-17 93.6 103 53.4
Cpa.g.sc25.108 Carica papaya HOM05D002206 ORTHO05D002219 7.0e-17 90.9 88 55.7
AUR62009879 Chenopodium quinoa HOM05D002206 ORTHO05D002219 7.0e-17 90.9 87 54.0
EL10Ac7g16404 Beta vulgaris HOM05D002206 ORTHO05D002219 1.2e-16 90.1 87 55.2
CsaV3_7G034530 Cucumis sativus L. HOM05D001583 ORTHO05D001900 1.6e-16 89.7 115 53.9
FAN05G1508 Fragaria x ananassa HOM05D002206 ORTHO05D002219 4.6e-16 88.2 92 56.5
Sc10g0007860 Simmondsia chinensis HOM05D002206 ORTHO05D002219 4.6e-16 88.2 107 47.7
Eucgr.J02823 Eucalyptus grandis HOM05D002206 ORTHO05D002219 7.8e-16 87.4 88 54.5
AUR62001491 Chenopodium quinoa HOM05D002206 ORTHO05D002219 2.3e-15 85.9 87 51.7
DCAR_007643 Daucus carota HOM05D002206 ORTHO05D002219 2.3e-15 85.9 101 54.5
Aqoxy7G01087 Aquilegia oxysepala HOM05D002206 ORTHO05D002219 3.9e-15 85.1 101 46.5
Lalb_Chr04g0263411 Lupinus albus HOM05D002206 ORTHO05D002219 6.6e-15 84.3 82 58.5
Cc00_g25540 Coffea canephora HOM05D002206 ORTHO05D002219 4.3e-14 81.6 111 46.8
PSO421G0732 Papaver somniferum HOM05D002206 ORTHO05D002219 4.3e-14 81.6 105 45.7
PSO063G5513 Papaver somniferum HOM05D002206 ORTHO05D002219 7.3e-14 80.9 99 50.5
MSTRG.4788 Avicennia marina HOM05D002206 ORTHO05D002219 9.5e-14 80.5 107 47.7
Nitab4.5_0012253g0010 Nicotiana tabacum HOM05D002206 ORTHO05D002219 9.5e-14 80.5 93 52.7
PGR102G2864 Punica granatum HOM05D002206 ORTHO05D002219 1.6e-13 79.7 65 60.0
Lsat_1_v5_gn_5_135921 Lactuca sativa HOM05D002206 ORTHO05D002219 2.8e-13 79.0 70 58.6
MBI19_g11854_MAGBIO Magnolia biondii HOM05D002206 ORTHO05D002219 2.8e-13 79.0 88 55.7
Aa31LG7G2240 Aethionema arabicum HOM05D002206 ORTHO05D002219 3.6e-13 78.6 101 43.6
Hund05742 Selenicereus undatus HOM05D002206 ORTHO05D002219 6.2e-13 77.8 100 46.0
SalBow7G3112 Salvia bowleyana HOM05D002206 ORTHO05D002219 1.1e-12 77.0 92 48.9
CDE07G0096 Ceratophyllum demersum HOM05D002206 ORTHO05D002219 2.3e-12 75.9 62 64.5
Nitab4.5_0002072g0040 Nicotiana tabacum HOM05D002206 ORTHO05D002219 3.1e-12 75.5 83 51.8
Sopen03g040810 Solanum pennellii HOM05D002206 ORTHO05D002219 6.8e-12 74.3 60 65.0
CDE06G2062 Ceratophyllum demersum HOM05D002206 ORTHO05D002219 1.2e-11 73.6 94 47.9
Migut.D00942 Erythranthe guttata HOM05D002206 ORTHO05D002219 2.0e-11 72.8 101 48.5
PGSC0003DMG400002481 Solanum tuberosum HOM05D002206 ORTHO05D002219 2.6e-11 72.4 60 63.3
Sp1g15600 Schrenkiella parvula HOM05D002206 ORTHO05D002219 3.4e-11 72.0 87 44.8
BraA06t24491Z Brassica rapa HOM05D002206 ORTHO05D002219 7.5e-11 70.9 123 37.4
C05p15870 Brassica napus HOM05D002206 ORTHO05D002219 9.9e-11 70.5 87 44.8
BolC5t30291H Brassica oleracea HOM05D002206 ORTHO05D002219 9.9e-11 70.5 87 44.8
CAN.G862.28 Capsicum annuum HOM05D002206 ORTHO05D002219 1.3e-10 70.1 54 68.5
A06p13390 Brassica napus HOM05D002206 ORTHO05D002219 2.2e-10 69.3 101 41.6
THA.LOC104808052 Tarenaya hassleriana HOM05D002206 ORTHO05D002219 2.9e-10 68.9 99 39.4
HanXRQChr10g0312061 Helianthus annuus HOM05D002206 ORTHO05D002219 6.4e-10 67.8 88 51.1
Solyc03g121990.4 Solanum lycopersicum HOM05D002206 ORTHO05D002219 6.4e-10 67.8 91 47.3
Haze_16020 Corylus avellana HOM05D002206 ORTHO05D002219 1.1e-09 67.0 59 61.0
Ah.08g216740 Amaranthus hybridus HOM05D002206 ORTHO05D002219 1.4e-09 66.6 108 34.3
BcaC08g46708 Brassica carinata HOM05D002206 ORTHO05D002219 5.4e-09 64.7 103 40.8
A07p38810 Brassica napus HOM05D002206 ORTHO05D002219 5.4e-09 64.7 102 40.2
BraA07t31435Z Brassica rapa HOM05D002206 ORTHO05D002219 5.4e-09 64.7 102 40.2
Haze_16021 Corylus avellana HOM05D002206 ORTHO05D002219 1.2e-08 63.5 51 66.7
BolC6t39738H Brassica oleracea HOM05D002118 ORTHO05D002219 2.1e-08 62.8 102 38.2
ATR0598G183 Amborella trichopoda HOM05D002206 ORTHO05D002219 2.7e-08 62.4 63 57.1
Actinidia37364 Actinidia chinensis HOM05D002206 ORTHO05D002219 3.5e-08 62.0 43 72.1
C06p46970 Brassica napus HOM05D002206 ORTHO05D002219 6.0e-08 61.2 103 38.8
Sabra01G0141200 Salix brachista HOM05D002206 ORTHO05D002219 7.8e-08 60.8 43 69.8
Duzib160G0193 Durio zibethinus HOM05D002206 ORTHO05D002219 2.3e-07 59.3 63 52.4
AT1G17460 Arabidopsis thaliana HOM05D002206 ORTHO05D002219 3.0e-07 58.9 100 39.0
Duzib235G0587 Durio zibethinus HOM05D002206 ORTHO05D002219 3.0e-07 58.9 69 47.8
Thhalv10018282m.g Eutrema salsugineum HOM05D002206 ORTHO05D002219 3.0e-07 58.9 103 39.8
CARHR018060 Cardamine hirsuta HOM05D002206 ORTHO05D002219 3.9e-07 58.5 87 36.8
BraA07t30651Z Brassica rapa HOM05D002206 ORTHO05D002219 6.6e-07 57.8 91 40.7
A07p30130 Brassica napus HOM05D002206 ORTHO05D002219 8.6e-07 57.4 91 40.7
Aa31LG4G3020 Aethionema arabicum HOM05D002206 ORTHO05D002219 1.9e-06 56.2 89 40.4
Sp5g27710 Schrenkiella parvula HOM05D002206 ORTHO05D002219 1.9e-06 56.2 102 36.3
Carub.0001s1723 Capsella rubella HOM05D002206 ORTHO05D002219 2.5e-06 55.8 64 48.4
Carub.0002s1950 Capsella rubella HOM05D002206 ORTHO05D002219 2.5e-06 55.8 63 49.2


User provided reference genes

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