Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.3e-109 397.9 229 100.0
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.9e-106 389.4 229 98.3
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 6.5e-59 231.5 244 60.7
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 3.3e-50 202.6 282 51.1
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 7.0e-45 184.9 239 57.3
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 4.5e-44 182.2 237 52.3
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 7.8e-44 181.4 243 53.5
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.6e-42 175.3 233 54.5
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 5.6e-42 175.3 250 53.6
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 9.5e-42 174.5 242 52.9
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 9.5e-42 174.5 253 51.4
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 9.5e-42 174.5 256 48.8
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.4e-40 170.6 259 49.0
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 4.0e-40 169.1 239 51.9
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 5.2e-40 168.7 253 48.2
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 2.6e-39 166.4 255 47.8
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 5.8e-39 165.2 251 45.8
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 7.5e-39 164.9 237 52.3
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 9.8e-39 164.5 253 47.0
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 2.9e-38 162.9 216 51.9
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 3.7e-38 162.5 171 63.7
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 4.9e-38 162.2 249 46.6
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.9e-38 162.2 240 50.0
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 8.3e-38 161.4 243 49.4
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 4.6e-36 155.6 274 43.8
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 4.6e-36 155.6 258 48.1
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 6.0e-36 155.2 181 57.5
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 7.8e-36 154.8 240 48.3
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.0e-35 154.5 245 45.7
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.0e-35 154.5 264 45.1
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.3e-35 154.1 249 45.0
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 3.0e-35 152.9 266 44.7
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.1e-34 151.0 234 51.7
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.9e-34 150.2 240 47.9
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 9.5e-34 147.9 251 46.2
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 8.0e-33 144.8 232 45.7
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.1e-32 144.4 260 48.8
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 2.3e-32 143.3 223 47.1
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 4.0e-32 142.5 221 45.7
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 5.2e-32 142.1 210 51.0
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.4e-31 139.4 251 43.8
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 1.3e-30 137.5 244 46.3
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 2.9e-30 136.3 216 47.2
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 3.5e-28 129.4 252 43.7
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.6e-28 129.0 252 42.9
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 6.0e-28 128.6 248 41.9
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 7.8e-28 128.3 252 42.9
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.0e-27 127.9 248 41.9
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.3e-27 126.7 150 54.0
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.0e-27 126.3 248 41.5
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 1.5e-26 124.0 260 37.3
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 4.7e-25 119.0 204 45.1
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 1.1e-24 117.9 222 42.3
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 5.2e-24 115.5 231 41.1
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 1.7e-22 110.5 239 39.7
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 2.9e-22 109.8 264 41.3
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 8.3e-22 108.2 220 41.4
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.1e-21 107.8 216 47.2
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.9e-21 107.1 286 36.4
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.2e-21 106.3 215 47.0
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 3.2e-21 106.3 226 40.7
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.2e-20 104.4 278 39.2
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 1.2e-20 104.4 259 39.0
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.1e-20 103.6 217 47.0
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 3.5e-20 102.8 179 42.5
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 1.0e-19 101.3 241 41.5
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 1.1e-18 97.8 236 39.8
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.1e-18 97.8 229 38.0
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 1.2e-17 94.4 121 52.9
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 2.1e-17 93.6 226 38.1
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 2.8e-17 93.2 123 52.8
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 4.7e-17 92.4 207 38.6
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 4.7e-17 92.4 219 37.4
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 1.1e-16 91.3 218 37.6
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 8.9e-16 88.2 211 37.4
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 8.9e-16 88.2 268 36.9
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 1.3e-14 84.3 181 41.4
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 7.8e-12 75.1 237 33.8
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 8.7e-11 71.6 230 31.3
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 2.5e-10 70.1 52 61.5
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.5e-10 70.1 75 58.7
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 2.5e-10 70.1 235 27.7
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 3.3e-10 69.7 211 32.2
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 3.3e-10 69.7 211 32.2
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 3.3e-10 69.7 211 32.2
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 3.3e-10 69.7 52 63.5
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 5.6e-10 68.9 67 55.2
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 7.3e-10 68.6 52 61.5
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.3e-09 67.8 234 31.2
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 1.3e-09 67.8 211 33.6
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 2.8e-09 66.6 94 47.9
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 2.8e-09 66.6 229 35.4
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 4.8e-09 65.9 125 38.4
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 4.8e-09 65.9 232 32.3
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 4.8e-09 65.9 229 35.8
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 1.4e-08 64.3 234 29.9
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 1.4e-08 64.3 230 31.3
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 1.4e-08 64.3 209 38.3
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 3.1e-08 63.2 232 31.5
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 5.3e-08 62.4 53 58.5
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 1.2e-07 61.2 197 32.5
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 1.5e-07 60.8 223 30.0
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 1.5e-07 60.8 53 56.6
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 2.0e-07 60.5 220 32.7
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.6e-07 60.1 97 43.3
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.4e-07 59.7 85 43.5
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.4e-07 59.7 85 43.5
BcaC07g39017 Brassica carinata HOM05D009961 ORTHO05D008483 4.4e-07 59.3 53 54.7
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 4.4e-07 59.3 53 54.7
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 4.4e-07 59.3 53 54.7
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.4e-07 59.3 85 43.5
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 5.8e-07 58.9 96 42.7
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 5.8e-07 58.9 88 46.6
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 9.9e-07 58.2 85 45.9
Ah.11g039950 Amaranthus hybridus HOM05D047386 ORTHO05D008483 1.3e-06 57.8 92 46.7
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 1.7e-06 57.4 85 42.4
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 1.7e-06 57.4 137 35.0
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 1.7e-06 57.4 185 29.2
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.2e-06 57.0 95 40.0
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 2.9e-06 56.6 137 35.8
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.8e-06 56.2 85 43.5
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 4.9e-06 55.8 87 41.4
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 8.4e-06 55.1 89 43.8
Manes.03G188600 Manihot esculenta HOM05D001921 ORTHO05D001784 8.4e-06 55.1 94 37.2


User provided reference genes

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