Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046240 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.4e-88 328.9 181 100.0
CSS0034215 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.4e-69 266.5 156 96.8
CSS0036244 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.4e-69 266.5 156 96.8
CSS0020638 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 7.2e-69 264.2 153 98.0
CSS0042890 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.2e-65 252.7 147 98.0
CSS0045726 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.5e-29 132.9 211 48.3
CSS0030810 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.8e-28 129.4 70 91.4
CSS0045950 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D109108 1.1e-19 100.9 53 98.1
CSS0047773 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.1e-19 100.9 67 76.1
CSS0016327 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110561 3.1e-19 99.4 54 98.1
CSS0016697 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110042 6.8e-19 98.2 59 89.8
CSS0020006 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D112963 1.2e-18 97.4 74 78.4
CSS0005762 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 5.8e-18 95.1 116 47.4
CSS0016483 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 1.3e-17 94.0 118 50.8
Rhsim06G0155100 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.3e-17 94.0 73 63.0
Rhsim02G0039500 Rhododendron simsii HOM05D010774 ORTHO05D013539 4.9e-17 92.0 198 39.9
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 3.2e-16 89.4 79 57.0
CSS0021417 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D111477 8.6e-14 81.3 42 97.6
Rhsim09G0158800 Rhododendron simsii HOM05D010774 ORTHO05D013539 9.6e-13 77.8 138 42.0
CSS0047842 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110128 1.2e-12 77.4 58 70.7
CSS0049523 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D110048 2.4e-11 73.2 59 67.8
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 5.4e-08 62.0 54 51.9
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-06 57.0 46 58.7
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.3e-06 56.6 46 58.7
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 5.1e-06 55.5 59 44.1
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 8.7e-06 54.7 46 58.7


User provided reference genes

Program Settings