Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 4.4e-121 438.0 220 100.0
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 2.0e-73 279.6 209 74.2
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 3.7e-67 258.8 214 68.7
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.1e-66 257.3 226 64.6
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 2.4e-66 256.1 231 65.4
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 9.0e-66 254.2 192 70.8
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 9.0e-66 254.2 214 66.8
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.2e-65 253.8 181 72.9
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.9e-65 251.5 228 65.4
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.3e-64 250.4 189 69.3
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 2.9e-64 249.2 211 66.4
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 5.0e-64 248.4 210 65.2
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.5e-63 246.1 201 68.7
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.5e-63 246.1 208 68.3
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 4.2e-63 245.4 210 66.7
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 7.2e-63 244.6 208 64.4
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.2e-62 243.8 166 76.5
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.2e-62 243.8 211 64.9
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 2.1e-62 243.0 186 69.9
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 2.1e-62 243.0 182 70.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 2.1e-62 243.0 209 63.6
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.1e-62 243.0 203 68.0
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 2.7e-62 242.7 187 71.7
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 4.6e-62 241.9 195 68.7
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 6.1e-62 241.5 210 64.3
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 7.9e-62 241.1 221 61.1
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 7.9e-62 241.1 208 65.4
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.0e-61 240.7 213 63.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.4e-61 240.4 195 66.2
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.3e-61 239.6 189 69.3
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 3.0e-61 239.2 228 61.4
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 3.0e-61 239.2 210 63.8
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 3.0e-61 239.2 150 81.3
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 3.9e-61 238.8 209 62.7
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 6.7e-61 238.0 158 78.5
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 6.7e-61 238.0 158 78.5
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.5e-60 236.9 148 81.1
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.0e-60 236.5 217 63.1
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 4.4e-60 235.3 180 70.0
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 5.7e-60 235.0 199 64.8
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 7.4e-60 234.6 239 58.6
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 9.7e-60 234.2 166 74.7
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 1.7e-59 233.4 165 74.5
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 6.3e-59 231.5 218 61.5
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.1e-58 230.7 188 67.6
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.4e-58 230.3 221 61.5
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.4e-58 229.6 207 60.9
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 2.4e-58 229.6 204 64.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.4e-58 229.6 211 63.0
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 1.2e-57 227.3 220 59.1
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.5e-57 226.9 215 60.0
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.5e-57 226.9 205 61.5
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.4e-57 225.7 211 63.5
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 4.5e-57 225.3 186 64.5
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 5.9e-57 224.9 205 61.5
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 5.9e-57 224.9 188 63.8
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 7.7e-57 224.6 215 58.6
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 7.7e-57 224.6 199 60.8
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.0e-56 224.2 215 59.1
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.0e-56 224.2 229 59.0
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.3e-56 223.8 200 62.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.2e-56 223.0 202 60.4
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.2e-56 223.0 169 68.6
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.9e-56 222.6 226 58.8
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 5.0e-56 221.9 222 59.9
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.9e-55 219.9 212 60.8
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 2.5e-55 219.5 149 75.2
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 5.5e-55 218.4 157 70.7
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 2.1e-54 216.5 213 59.6
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 3.6e-54 215.7 149 74.5
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 4.7e-54 215.3 186 61.8
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 6.1e-54 214.9 159 71.1
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 7.9e-54 214.5 159 70.4
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.4e-53 213.8 216 57.4
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.4e-53 213.8 149 74.5
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 3.0e-53 212.6 199 61.3
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 5.2e-53 211.8 194 61.3
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 8.8e-53 211.1 147 72.8
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 8.8e-53 211.1 153 70.6
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.3e-51 207.2 216 56.5
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.0e-49 199.9 136 77.2
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 7.7e-49 198.0 203 61.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.9e-48 196.1 164 63.4
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.9e-47 193.4 161 65.2
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 3.6e-46 189.1 189 56.1
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.4e-45 187.2 208 53.8
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 8.8e-45 184.5 207 50.7
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.2e-44 184.1 214 56.1
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 9.7e-44 181.0 155 60.0
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 4.8e-43 178.7 171 60.8
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.1e-42 177.6 205 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 1.6e-41 173.7 175 56.0
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.0e-33 146.7 152 55.3
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.0e-33 146.7 94 79.8
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.0e-28 130.2 88 76.1
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 2.6e-28 129.8 140 50.7
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.1e-23 114.4 79 77.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.9e-19 99.0 56 85.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.1e-18 97.8 69 73.9
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.1e-14 83.6 100 54.0
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-09 67.8 101 45.5


User provided reference genes

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