Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 3.8e-150 535.0 312 100.0
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 2.6e-111 406.0 297 78.1
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.9e-110 402.5 298 78.5
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 3.8e-110 402.1 298 78.9
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 3.3e-106 389.0 297 77.1
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 3.3e-98 362.5 304 70.4
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 2.2e-97 359.8 307 68.4
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 5.0e-94 348.6 305 66.9
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 2.3e-91 339.7 294 69.0
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.3e-91 339.7 306 66.0
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.6e-90 336.3 306 66.0
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 1.7e-89 333.6 306 65.7
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.7e-89 333.6 305 65.6
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 4.8e-89 332.0 294 66.7
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 6.3e-89 331.6 307 66.4
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.4e-88 330.5 307 64.8
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 2.4e-88 329.7 290 64.8
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 4.1e-88 328.9 294 68.4
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 5.4e-88 328.6 313 66.5
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.6e-87 327.0 321 62.9
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 2.9e-86 322.8 257 71.2
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 3.8e-86 322.4 299 62.2
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 8.5e-86 321.2 306 63.7
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.1e-85 320.9 292 63.4
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.5e-85 320.5 292 63.7
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.2e-85 318.9 292 63.4
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.2e-84 317.4 305 63.0
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.6e-84 317.0 292 62.3
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.6e-84 317.0 295 64.1
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.6e-84 317.0 292 64.7
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.0e-83 314.3 294 62.9
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.8e-83 313.5 290 65.5
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 2.0e-82 310.1 291 62.9
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.6e-82 309.7 295 62.7
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 5.7e-82 308.5 291 65.6
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 2.2e-81 306.6 301 63.8
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.1e-80 304.3 299 61.9
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 1.6e-79 300.4 299 61.5
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 2.7e-79 299.7 306 58.8
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.3e-78 297.4 305 62.3
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.7e-78 297.0 293 61.1
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 2.5e-77 293.1 304 59.2
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 7.3e-77 291.6 301 61.8
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.6e-76 290.4 304 58.6
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.6e-76 290.4 336 59.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 6.1e-76 288.5 297 62.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 6.1e-76 288.5 282 64.5
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.8e-75 287.0 295 61.4
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.5e-74 283.9 318 59.4
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 3.4e-74 282.7 305 58.4
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 7.5e-74 281.6 298 62.1
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 9.8e-74 281.2 294 57.8
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 9.8e-74 281.2 288 61.5
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.7e-73 280.4 289 60.9
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.7e-73 280.4 293 61.1
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.4e-72 276.6 291 56.7
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 1.9e-69 266.9 256 64.1
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 2.1e-68 263.5 289 58.5
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 6.8e-67 258.5 320 55.9
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 6.8e-67 258.5 320 55.9
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 3.7e-65 252.7 289 59.2
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 3.9e-62 242.7 286 54.9
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.9e-61 240.4 222 64.4
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 3.3e-61 239.6 270 54.4
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 3.3e-61 239.6 288 53.5
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.8e-60 236.5 289 51.9
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 3.6e-60 236.1 254 57.5
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.2e-58 231.1 263 57.8
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 5.8e-58 228.8 291 51.2
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.4e-56 223.4 259 50.6
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 3.2e-56 223.0 216 63.9
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 5.4e-56 222.2 227 58.6
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.5e-53 213.4 289 49.1
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 3.3e-53 213.0 293 48.8
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 4.3e-53 212.6 288 49.0
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.2e-52 211.1 259 45.6
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 2.1e-52 210.3 293 49.8
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 2.8e-52 209.9 289 48.8
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 6.2e-52 208.8 287 48.4
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 1.1e-51 208.0 230 51.7
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.8e-51 207.2 259 48.6
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 2.6e-50 203.4 291 47.1
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 3.4e-50 203.0 288 48.3
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 4.4e-50 202.6 288 47.9
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 7.6e-50 201.8 291 46.7
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 7.6e-50 201.8 296 47.6
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 9.9e-50 201.4 289 47.1
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 9.9e-50 201.4 303 45.9
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.1e-48 198.0 287 49.1
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 3.2e-48 196.4 286 47.9
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 5.4e-48 195.7 209 61.7
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.7e-47 193.4 265 53.2
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 6.0e-47 192.2 213 54.5
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 1.3e-46 191.0 202 55.4
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 3.6e-44 183.0 267 44.6
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 1.8e-43 180.6 239 56.1
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.8e-41 172.9 219 51.1
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 7.8e-39 165.2 240 46.7
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 1.3e-36 157.9 189 46.6
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 4.8e-36 156.0 251 42.6
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 6.9e-35 152.1 255 43.1
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 1.3e-33 147.9 194 44.3
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 2.7e-31 140.2 79 93.7
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 2.1e-28 130.6 264 39.4
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 1.5e-21 107.8 275 34.2
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 2.5e-21 107.1 296 33.4
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 6.9e-19 99.0 125 45.6
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.5e-18 97.8 272 36.8
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 1.7e-17 94.4 154 40.3
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 6.5e-17 92.4 72 70.8
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 1.1e-16 91.7 239 33.5
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 3.5e-15 86.7 245 33.9
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.3e-14 84.0 102 56.9
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 3.0e-14 83.6 230 35.7
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 5.1e-14 82.8 111 55.9
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 5.1e-14 82.8 288 34.7
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.2e-12 77.4 73 53.4
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 3.7e-12 76.6 321 34.9
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 3.8e-09 66.6 301 29.9


User provided reference genes

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