Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046217 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 3.1e-107 391.7 190 100.0
CSS0022144 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 1.6e-74 283.1 147 94.6
vmacro18518 Vaccinium macrocarpon HOM05D005902 ORTHO05D007182 6.8e-70 267.7 147 88.4
Rhsim08G0020200 Rhododendron simsii HOM05D005902 ORTHO05D007182 9.9e-69 263.8 147 87.8
Hma1.2p1_0158F.1_g069840 Hydrangea macrophylla HOM05D005902 ORTHO05D007182 8.4e-68 260.8 147 85.7
Actinidia35717 Actinidia chinensis HOM05D005902 ORTHO05D007182 1.1e-67 260.4 147 87.8
Dinv28227 Davidia involucrata HOM05D005902 ORTHO05D007182 1.1e-67 260.4 147 86.4
Cc07_g13000 Coffea canephora HOM05D005902 ORTHO05D007182 3.2e-67 258.8 147 83.7
Nn3g18467 Nelumbo nucifera HOM05D005902 ORTHO05D007182 3.2e-67 258.8 147 82.3
Peaxi162Scf00525g00623 Petunia axillaris HOM05D005902 ORTHO05D007182 1.6e-66 256.5 147 85.7
CAN.G1464.8 Capsicum annuum HOM05D005902 ORTHO05D007182 2.7e-66 255.8 147 84.4
Lj2A514T43 Lonicera japonica HOM05D005902 ORTHO05D007182 2.7e-66 255.8 147 86.4
Manes.05G062600 Manihot esculenta HOM05D005902 ORTHO05D007182 2.7e-66 255.8 147 84.4
Nitab4.5_0017196g0010 Nicotiana tabacum HOM05D005902 ORTHO05D007182 3.5e-66 255.4 147 84.4
Haze_14303 Corylus avellana HOM05D005902 ORTHO05D007182 6.0e-66 254.6 147 84.4
Ciclev10005984m.g Citrus clementina HOM05D005902 ORTHO05D007182 1.0e-65 253.8 147 82.3
TAR371G0118 Trochodendron aralioides HOM05D005902 ORTHO05D007182 1.3e-65 253.4 147 80.3
PGSC0003DMG400023318 Solanum tuberosum HOM05D005902 ORTHO05D007182 1.7e-65 253.1 147 84.4
TWI53G1594 Tripterygium wilfordii HOM05D005902 ORTHO05D007182 2.3e-65 252.7 147 83.0
RcHm_v2.0_Chr3g0493321 Rosa chinensis HOM05D005902 ORTHO05D007182 3.0e-65 252.3 147 85.0
CiPaw.03G078000 Carya illinoinensis HOM05D005902 ORTHO05D007182 3.9e-65 251.9 147 83.7
Solyc05g056560.3 Solanum lycopersicum HOM05D005902 ORTHO05D007182 6.6e-65 251.1 147 83.0
Sopen05g034960 Solanum pennellii HOM05D005902 ORTHO05D007182 6.6e-65 251.1 147 83.0
Cfa007771 Carpinus fangiana HOM05D005902 ORTHO05D007182 8.6e-65 250.8 147 83.7
CsaV3_3G020300 Cucumis sativus L. HOM05D005902 ORTHO05D007182 8.6e-65 250.8 147 81.6
MBI13_g21692_MAGBIO Magnolia biondii HOM05D005902 ORTHO05D007182 8.6e-65 250.8 147 81.6
Nitab4.5_0000905g0130 Nicotiana tabacum HOM05D005902 ORTHO05D007182 8.6e-65 250.8 147 83.0
PGR031G2550 Punica granatum HOM05D005902 ORTHO05D007182 8.6e-65 250.8 147 80.3
MELO3C023753.2 Cucumis melo HOM05D005902 ORTHO05D007182 1.5e-64 250.0 147 81.6
FAN26G1601 Fragaria x ananassa HOM05D005902 ORTHO05D007182 1.9e-64 249.6 147 83.7
Lsat_1_v5_gn_8_111480 Lactuca sativa HOM05D005902 ORTHO05D007182 1.9e-64 249.6 150 83.3
PSO063G5475 Papaver somniferum HOM05D005902 ORTHO05D007182 1.9e-64 249.6 147 80.3
ClCG05G012140 Citrullus lanatus HOM05D005902 ORTHO05D007182 5.6e-64 248.1 147 81.0
FAN28G1805 Fragaria x ananassa HOM05D005902 ORTHO05D007182 7.3e-64 247.7 147 83.0
MD17G1258000 Malus domestica HOM05D005902 ORTHO05D007182 7.3e-64 247.7 147 83.0
FAN19G0020 Fragaria x ananassa HOM05D005902 ORTHO05D007182 1.2e-63 246.9 147 83.0
GSVIVG01026316001 Vitis vinifera HOM05D005902 ORTHO05D007182 2.8e-63 245.7 149 81.9
Thecc.01G244600 Theobroma cacao HOM05D005902 ORTHO05D007182 3.6e-63 245.4 147 81.0
MD09G1263000 Malus domestica HOM05D005902 ORTHO05D007182 6.2e-63 244.6 147 81.6
arahy.Tifrunner.gnm1.ann1.YJU2T0 Arachis hypogaea HOM05D005902 ORTHO05D007182 8.1e-63 244.2 149 79.2
MSTRG.15644 Avicennia marina HOM05D005902 ORTHO05D007182 1.1e-62 243.8 149 80.5
TWI74G1040 Tripterygium wilfordii HOM05D005902 ORTHO05D007182 1.1e-62 243.8 147 78.9
HanXRQChr09g0259821 Helianthus annuus HOM05D005902 ORTHO05D007182 1.4e-62 243.4 150 82.0
Potri.004G082100 Populus trichocarpa HOM05D005902 ORTHO05D007182 1.4e-62 243.4 147 78.2
arahy.Tifrunner.gnm1.ann1.00Q11I Arachis hypogaea HOM05D005902 ORTHO05D007182 1.8e-62 243.0 149 78.5
PSO782G1752 Papaver somniferum HOM05D005902 ORTHO05D007182 2.4e-62 242.7 147 78.9
Glyma.02G242000 Glycine max HOM05D005902 ORTHO05D007182 3.1e-62 242.3 149 81.9
Sed0000187 Sechium edule HOM05D005902 ORTHO05D007182 3.1e-62 242.3 147 78.9
Glyma.14G211800 Glycine max HOM05D005902 ORTHO05D007182 4.0e-62 241.9 149 81.2
VMungo0647G1816 Vigna mungo HOM05D005902 ORTHO05D007182 4.0e-62 241.9 149 81.2
QL02p060024 Quercus lobata HOM05D005902 ORTHO05D007182 5.2e-62 241.5 149 79.9
SGA_v2.0_scaffold45G17133 Striga asiatica HOM05D005902 ORTHO05D007182 5.2e-62 241.5 149 80.5
Atru.chr1.1947 Acer truncatum HOM05D005902 ORTHO05D007182 6.8e-62 241.1 147 78.9
MSTRG.3687 Avicennia marina HOM05D005902 ORTHO05D007182 1.2e-61 240.4 149 79.9
Lalb_Chr10g0104081 Lupinus albus HOM05D005902 ORTHO05D007182 1.2e-61 240.4 152 78.9
Oeu048966.1 Olea europaea HOM05D005902 ORTHO05D007182 1.2e-61 240.4 150 80.0
Prupe.3G160700 Prunus persica HOM05D005902 ORTHO05D007182 2.0e-61 239.6 147 79.6
Migut.K01111 Erythranthe guttata HOM05D005902 ORTHO05D007182 2.6e-61 239.2 149 79.9
Sabra04G0054600 Salix brachista HOM05D005902 ORTHO05D007182 2.6e-61 239.2 147 76.9
Oeu009432.1 Olea europaea HOM05D005902 ORTHO05D007182 4.4e-61 238.4 150 78.7
CANSAT80G0886 Cannabis sativa HOM05D005902 ORTHO05D007182 7.6e-61 237.7 151 75.5
Gohir.D12G002400 Gossypium hirsutum HOM05D005902 ORTHO05D007182 9.9e-61 237.3 147 77.6
Gorai.008G001800 Gossypium raimondii HOM05D005902 ORTHO05D007182 9.9e-61 237.3 147 77.6
LjContig00141g0001362 Lotus japonicus HOM05D005902 ORTHO05D007182 2.2e-60 236.1 151 79.5
Phvul.008G239100 Phaseolus vulgaris HOM05D005902 ORTHO05D007182 2.2e-60 236.1 149 79.2
Ca_05775_v3 Cicer arietinum L. HOM05D005902 ORTHO05D007182 3.8e-60 235.3 150 77.3
Duzib264G0381 Durio zibethinus HOM05D005902 ORTHO05D007182 3.8e-60 235.3 147 76.9
Duzib187G0521 Durio zibethinus HOM05D005902 ORTHO05D007182 4.9e-60 235.0 147 77.6
ATR0598G055 Amborella trichopoda HOM05D005902 ORTHO05D007182 6.4e-60 234.6 147 77.6
Aqoxy3G04009 Aquilegia oxysepala HOM05D005902 ORTHO05D007182 6.4e-60 234.6 148 72.3
Gohir.A12G002700 Gossypium hirsutum HOM05D005902 ORTHO05D007182 8.4e-60 234.2 147 76.2
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 8.4e-60 234.2 147 76.9
THA.LOC104822070 Tarenaya hassleriana HOM05D005902 ORTHO05D007182 8.4e-60 234.2 150 76.0
DCAR_010066 Daucus carota HOM05D005902 ORTHO05D007182 1.1e-59 233.8 147 76.9
TPR.G9985 Trifolium pratense HOM05D005902 ORTHO05D007182 1.1e-59 233.8 150 78.7
SalBow5G2060 Salvia bowleyana HOM05D005902 ORTHO05D007182 1.4e-59 233.4 149 77.9
Cpa.g.sc178.4 Carica papaya HOM05D005902 ORTHO05D007182 1.9e-59 233.0 147 74.8
Psat2g044640 Pisum sativum HOM05D005902 ORTHO05D007182 1.9e-59 233.0 150 77.3
Lalb_Chr17g0345911 Lupinus albus HOM05D005902 ORTHO05D007182 5.4e-59 231.5 152 75.0
Medtr5g077260 Medicago truncatula HOM05D005902 ORTHO05D007182 7.1e-59 231.1 150 76.0
BraA07t30938Z Brassica rapa HOM05D005902 ORTHO05D007182 1.2e-58 230.3 149 75.8
AUR62039116 Chenopodium quinoa HOM05D005902 ORTHO05D007182 2.7e-58 229.2 147 73.5
Aa31LG2G2820 Aethionema arabicum HOM05D005902 ORTHO05D007182 7.8e-58 227.6 149 75.2
AUR62009143 Chenopodium quinoa HOM05D005902 ORTHO05D007182 7.8e-58 227.6 147 74.1
A07p33100 Brassica napus HOM05D005902 ORTHO05D007182 1.0e-57 227.3 149 75.2
Hund03335 Selenicereus undatus HOM05D005902 ORTHO05D007182 1.0e-57 227.3 149 75.2
EL10Ac2g03874 Beta vulgaris HOM05D005902 ORTHO05D007182 1.3e-57 226.9 149 74.5
ECA240G4510 Erigeron canadensis HOM05D005902 ORTHO05D007182 1.3e-57 226.9 152 75.0
Sc09g0004530 Simmondsia chinensis HOM05D005902 ORTHO05D007182 1.3e-57 226.9 150 74.0
unitig_748.g7250 Utricularia gibba HOM05D005902 ORTHO05D007182 1.3e-57 226.9 149 75.2
BcaC08g46080 Brassica carinata HOM05D005902 ORTHO05D007182 1.7e-57 226.5 149 75.2
BolC6t39030H Brassica oleracea HOM05D005902 ORTHO05D007182 1.7e-57 226.5 149 75.2
C06p39370 Brassica napus HOM05D005902 ORTHO05D007182 2.3e-57 226.1 149 75.2
BcaB05g24153 Brassica carinata HOM05D005902 ORTHO05D007182 5.1e-57 224.9 149 74.5
C02p21750 Brassica napus HOM05D005902 ORTHO05D007182 5.1e-57 224.9 149 74.5
A02p13450 Brassica napus HOM05D005902 ORTHO05D007182 8.7e-57 224.2 149 74.5
BraA02t06403Z Brassica rapa HOM05D005902 ORTHO05D007182 8.7e-57 224.2 149 74.5
Thhalv10019182m.g Eutrema salsugineum HOM05D005902 ORTHO05D007182 1.9e-56 223.0 149 74.5
BcaB03g15295 Brassica carinata HOM05D005902 ORTHO05D007182 2.5e-56 222.6 147 74.1
CDE05G1035 Ceratophyllum demersum HOM05D005902 ORTHO05D007182 2.5e-56 222.6 147 72.8
AL2G23690 Arabidopsis lyrata HOM05D005902 ORTHO05D007182 3.3e-56 222.2 149 73.8
AT1G66080 Arabidopsis thaliana HOM05D005902 ORTHO05D007182 4.3e-56 221.9 149 73.8
Sp5g21150 Schrenkiella parvula HOM05D005902 ORTHO05D007182 4.3e-56 221.9 149 73.2
CDE05G2622 Ceratophyllum demersum HOM05D005902 ORTHO05D007182 5.6e-56 221.5 147 72.8
Carub.0002s1207 Capsella rubella HOM05D005902 ORTHO05D007182 7.3e-56 221.1 149 73.2
COL.COLO4_08161 Corchorus olitorius HOM05D005902 ORTHO05D007182 1.3e-55 220.3 136 80.1
CARHR058040 Cardamine hirsuta HOM05D005902 ORTHO05D007182 8.1e-55 217.6 149 71.8
Sed0027099 Sechium edule HOM05D005902 ORTHO05D007182 1.8e-54 216.5 147 75.5
CSS0023311 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 1.7e-52 209.9 176 64.8
SMO278G0026 Selaginella moellendorffii HOM05D005902 ORTHO05D007182 4.2e-51 205.3 147 65.3
Mapoly0006s0187 Marchantia polymorpha HOM05D005902 ORTHO05D007182 2.5e-48 196.1 156 62.8
AagrBONN_evm.TU.Sc2ySwM_344.787 Anthoceros agrestis HOM05D005902 ORTHO05D007182 3.6e-47 192.2 149 63.8
Pp3c27_3020 Physcomitrium patens HOM05D005902 ORTHO05D007182 1.8e-46 189.9 157 61.8
TAR629G3091 Trochodendron aralioides HOM05D005902 ORTHO05D007182 3.1e-46 189.1 134 69.4
Pp3c16_2230 Physcomitrium patens HOM05D005902 ORTHO05D007182 1.7e-44 183.3 148 61.5
SMO367G0342 Selaginella moellendorffii HOM05D005902 ORTHO05D007182 7.1e-43 177.9 157 53.5
Pp3c10_12120 Physcomitrium patens HOM05D005902 ORTHO05D007182 5.1e-41 171.8 147 53.7
Ah.10g034300 Amaranthus hybridus HOM05D005902 ORTHO05D007182 2.5e-40 169.5 127 68.5
Pp3c3_23430 Physcomitrium patens HOM05D005902 ORTHO05D007182 3.3e-40 169.1 147 53.1
FvH4_1g28840 Fragaria vesca HOM05D005902 ORTHO05D007182 6.2e-39 164.9 104 81.7
CBR_g54208 Chara braunii HOM05D005902 ORTHO05D007182 5.8e-37 158.3 149 54.4
CBR_g54207 Chara braunii HOM05D005902 ORTHO05D007182 1.3e-36 157.1 148 53.4
Mapoly0001s0397 Marchantia polymorpha HOM05D005902 ORTHO05D007182 4.6e-34 148.7 147 50.3
MD03G1052600 Malus domestica HOM05D005902 ORTHO05D007182 3.3e-32 142.5 91 74.7
HPP92_002287 Vanilla planifolia HOM05D005902 ORTHO05D007182 3.2e-27 125.9 107 59.8
MD01G1041600 Malus domestica HOM05D005902 ORTHO05D007182 8.7e-25 117.9 79 70.9
Zm00001eb010060 Zea mays HOM05D005902 ORTHO05D007182 2.0e-21 106.7 150 43.3
Os03g0237500 Oryza sativa ssp. japonica HOM05D005902 ORTHO05D007182 4.5e-21 105.5 151 45.0
MCO11G231 Micromonas commoda HOM05D005902 ORTHO05D007182 5.5e-19 98.6 148 37.2
Cre16.g691215 Chlamydomonas reinhardtii HOM05D005902 ORTHO05D007182 3.4e-13 79.3 146 31.5
BcaC03g14730 Brassica carinata HOM05D005902 ORTHO05D007182 2.9e-12 76.3 52 73.1
BolC2t08309H Brassica oleracea HOM05D005902 ORTHO05D007182 2.4e-06 56.6 28 85.7


User provided reference genes

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