Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046213 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 5.1e-84 314.3 153 100.0
CSS0010565 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 2.5e-70 268.9 153 88.2
CSS0024463 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 3.7e-66 255.0 153 83.7
CSS0027113 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 8.2e-66 253.8 154 85.1
CSS0027443 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 1.4e-60 236.5 149 79.9
CSS0018501 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 3.0e-60 235.3 150 78.7
CSS0037593 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-57 225.3 187 66.3
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.1e-57 224.9 191 65.4
RhsimUnG0018200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.1e-33 147.1 190 48.4
Rhsim04G0054300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.3e-31 140.2 189 47.1
Rhsim04G0055200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-31 139.8 191 45.0
Rhsim04G0053600 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.3e-31 139.4 191 45.0
Rhsim04G0054600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.0e-31 139.0 191 45.0
Rhsim04G0055600 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.2e-29 131.3 189 46.6
Rhsim04G0053900 Rhododendron simsii HOM05D000092 ORTHO05D000042 8.0e-29 131.0 190 46.8
Rhsim04G0054000 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.0e-27 126.3 167 47.9
vmacro09349 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.6e-24 116.7 180 43.9
Dinv01598 Davidia involucrata HOM05D000092 ORTHO05D000042 5.0e-23 111.7 169 38.5
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-20 104.0 189 37.0
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 2.3e-20 102.8 187 35.3
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 6.8e-20 101.3 158 37.3
Dinv40988 Davidia involucrata HOM05D000092 ORTHO05D000042 6.8e-20 101.3 169 37.3
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-19 99.4 182 34.6
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-19 99.0 189 34.9
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 7.5e-19 97.8 182 35.7
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-18 96.3 182 35.2
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-17 92.8 162 35.2
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-15 84.3 133 36.1
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 4.7e-13 78.6 171 32.7
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 4.7e-13 78.6 171 32.7
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 5.2e-12 75.1 121 39.7
Dinv12837 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-10 69.3 125 36.8
Dinv03246 Davidia involucrata HOM05D000092 ORTHO05D000042 4.9e-10 68.6 162 34.0
Thecc.05G202500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.4e-09 67.0 149 32.2
Thecc.05G211400 Theobroma cacao HOM05D000092 ORTHO05D000042 4.1e-09 65.5 73 45.2
Dinv20558 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-08 63.9 169 29.0
Dinv20738 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-08 63.9 169 29.0
Manes.02G215000 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 38.4
Manes.02G215120 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 37.4
Manes.02G215445 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 37.4
Manes.02G215615 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 37.4
Manes.07G062324 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 38.4
COL.COLO4_32833 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.6e-08 63.5 76 44.7
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-08 63.5 172 27.9
Dinv07579 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-08 63.5 121 36.4
Manes.02G215325 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-08 63.5 99 37.4
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-08 63.5 99 36.4
Manes.02G215700 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-08 63.5 99 37.4
Potri.005G061860 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.6e-08 63.5 73 45.2
Thecc.05G202900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.6e-08 63.5 144 31.9
Thecc.05G202700 Theobroma cacao HOM05D000092 ORTHO05D000042 2.1e-08 63.2 144 31.9
Dinv10941 Davidia involucrata HOM05D000092 ORTHO05D000042 2.7e-08 62.8 162 30.2
Manes.02G215400 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-08 62.8 99 37.4
Manes.02G215420 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-08 62.8 99 37.4
Manes.02G215430 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-08 62.8 99 37.4
VMungo0331G0423 Vigna mungo HOM05D000092 ORTHO05D000042 2.7e-08 62.8 157 30.6
Eucgr.L00094 Eucalyptus grandis HOM05D000092 ORTHO05D000042 3.5e-08 62.4 112 33.9
Manes.02G215425 Manihot esculenta HOM05D000092 ORTHO05D000042 3.5e-08 62.4 99 36.4
PGR042G3726 Punica granatum HOM05D000092 ORTHO05D000042 3.5e-08 62.4 72 41.7
QL01p042119 Quercus lobata HOM05D000092 ORTHO05D000042 4.6e-08 62.0 143 28.7
Dinv07584 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 106 34.0
Dinv12839 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 64 50.0
Dinv40446 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 83 41.0
Manes.07G060700 Manihot esculenta HOM05D000092 ORTHO05D000042 6.0e-08 61.6 80 38.8
Eucgr.L00073 Eucalyptus grandis HOM05D000092 ORTHO05D000042 1.0e-07 60.8 122 30.3
Glyma.07G065000 Glycine max HOM05D000092 ORTHO05D000042 1.0e-07 60.8 77 39.0
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-07 60.8 76 44.7
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-07 60.8 76 44.7
Potri.005G062130 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.0e-07 60.8 73 43.8
Dinv12835 Davidia involucrata HOM05D000092 ORTHO05D000042 1.3e-07 60.5 77 45.5
QL01p042065 Quercus lobata HOM05D000092 ORTHO05D000042 1.3e-07 60.5 143 28.0
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 1.3e-07 60.5 101 37.6
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.3e-07 60.5 96 33.3
VMungo0331G0195 Vigna mungo HOM05D000092 ORTHO05D000042 1.3e-07 60.5 82 35.4
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 1.7e-07 60.1 75 41.3
Cfa006504 Carpinus fangiana HOM05D000092 ORTHO05D000042 2.3e-07 59.7 111 29.7
CiPaw.08G175500 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.3e-07 59.7 163 25.8
Manes.07G063100 Manihot esculenta HOM05D000092 ORTHO05D000042 2.3e-07 59.7 76 44.7
PGR042G0832 Punica granatum HOM05D000092 ORTHO05D000042 2.3e-07 59.7 67 43.3
QL03p002957 Quercus lobata HOM05D000092 ORTHO05D000042 2.3e-07 59.7 94 38.3
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 3.0e-07 59.3 98 37.8
Glyma.07G065500 Glycine max HOM05D000092 ORTHO05D000042 3.0e-07 59.3 153 28.1
Manes.07G060300 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-07 59.3 71 43.7
Manes.07G061500 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-07 59.3 71 43.7
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.0e-07 59.3 94 40.4
Manes.07G062348 Manihot esculenta HOM05D000092 ORTHO05D000042 3.9e-07 58.9 76 43.4
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 3.9e-07 58.9 155 27.7
arahy.Tifrunner.gnm1.ann1.TXZ93S Arachis hypogaea HOM05D000092 ORTHO05D000042 5.1e-07 58.5 145 30.3
Lj1g0024619 Lotus japonicus HOM05D000092 ORTHO05D000042 5.1e-07 58.5 98 33.7
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 5.1e-07 58.5 67 44.8
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 5.1e-07 58.5 71 43.7
COL.COLO4_20151 Corchorus olitorius HOM05D000092 ORTHO05D000042 6.6e-07 58.2 81 38.3
Dinv36125 Davidia involucrata HOM05D000092 ORTHO05D000042 6.6e-07 58.2 100 34.0
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 6.6e-07 58.2 76 43.4
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 77 46.8
Dinv07585 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 77 46.8
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 100 35.0
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 100 35.0
Duzib177G0159 Durio zibethinus HOM05D000092 ORTHO05D000042 8.6e-07 57.8 89 42.7
Glyma.U031414 Glycine max HOM05D000092 ORTHO05D000042 8.6e-07 57.8 152 30.3
Gohir.D10G253550 Gossypium hirsutum HOM05D000092 ORTHO05D000042 8.6e-07 57.8 98 33.7
Phvul.008G070800 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 8.6e-07 57.8 78 37.2
Thecc.05G295000 Theobroma cacao HOM05D000092 ORTHO05D000042 8.6e-07 57.8 102 32.4
Gohir.D11G270500 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.1e-06 57.4 105 31.4
Manes.07G062700 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-06 57.4 111 32.4
VMungo0331G0510 Vigna mungo HOM05D000092 ORTHO05D000042 1.1e-06 57.4 77 39.0
Gorai.011G294500 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.5e-06 57.0 98 33.7
Lalb_Chr01g0006961 Lupinus albus HOM05D000092 ORTHO05D000042 1.5e-06 57.0 116 33.6
Duzib177G0490 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-06 56.6 89 40.4
Duzib177G0893 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-06 56.6 76 44.7
Glyma.07G065600 Glycine max HOM05D000092 ORTHO05D000042 1.9e-06 56.6 77 36.4
QL03p002457 Quercus lobata HOM05D000092 ORTHO05D000042 1.9e-06 56.6 66 42.4
VMungo0166G0001 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-06 56.6 66 39.4
VMungo0331G1299 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-06 56.6 74 40.5
GSVIVG01036191001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.9e-06 56.6 140 29.3
arahy.Tifrunner.gnm1.ann1.Y9RN7U Arachis hypogaea HOM05D000092 ORTHO05D000042 2.5e-06 56.2 137 29.9
Duzib177G0387 Durio zibethinus HOM05D000092 ORTHO05D000042 2.5e-06 56.2 89 40.4
Duzib192G0564 Durio zibethinus HOM05D000092 ORTHO05D000042 2.5e-06 56.2 94 37.2
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.5e-06 56.2 71 45.1
FAN11G3620 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.3e-06 55.8 118 30.5
Manes.10G028600 Manihot esculenta HOM05D000092 ORTHO05D000042 3.3e-06 55.8 78 37.2
PGR042G3045 Punica granatum HOM05D000092 ORTHO05D000042 3.3e-06 55.8 72 40.3
QL03p001771 Quercus lobata HOM05D000092 ORTHO05D000042 3.3e-06 55.8 71 40.8
Thecc.05G296200 Theobroma cacao HOM05D000092 ORTHO05D000042 3.3e-06 55.8 81 37.0
Eucgr.G00878 Eucalyptus grandis HOM05D000092 ORTHO05D000042 4.3e-06 55.5 69 44.9
Glyma.07G062900 Glycine max HOM05D000092 ORTHO05D000042 4.3e-06 55.5 153 29.4
Glyma.U031914 Glycine max HOM05D000092 ORTHO05D000042 4.3e-06 55.5 77 41.6
Manes.03G060801 Manihot esculenta HOM05D000092 ORTHO05D000042 4.3e-06 55.5 179 26.8
Manes.07G060750 Manihot esculenta HOM05D000092 ORTHO05D000042 4.3e-06 55.5 99 34.3
Manes.10G028501 Manihot esculenta HOM05D000092 ORTHO05D000042 4.3e-06 55.5 78 35.9
QL03p001787 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-06 55.5 69 42.0
QL03p002023 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-06 55.5 75 41.3
QL10p064757 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-06 55.5 66 43.9
Thecc.05G296500 Theobroma cacao HOM05D000092 ORTHO05D000042 4.3e-06 55.5 100 32.0
VMungo0331G0485 Vigna mungo HOM05D000092 ORTHO05D000042 4.3e-06 55.5 66 39.4
arahy.Tifrunner.gnm1.ann1.BPD95K Arachis hypogaea HOM05D000092 ORTHO05D000042 5.6e-06 55.1 104 34.6
Ca_27735_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 5.6e-06 55.1 75 37.3
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 5.6e-06 55.1 72 38.9
Duzib177G0994 Durio zibethinus HOM05D000092 ORTHO05D000042 5.6e-06 55.1 89 41.6
Glyma.07G063300 Glycine max HOM05D000092 ORTHO05D000042 5.6e-06 55.1 77 37.7
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 5.6e-06 55.1 76 42.1
VMungo0331G0577 Vigna mungo HOM05D000092 ORTHO05D000042 5.6e-06 55.1 80 36.2
Cfa019909 Carpinus fangiana HOM05D000092 ORTHO05D000042 7.3e-06 54.7 111 29.7
COL.COLO4_37555 Corchorus olitorius HOM05D000092 ORTHO05D000042 7.3e-06 54.7 124 29.8
Psat5g221880 Pisum sativum HOM05D000092 ORTHO05D000042 7.3e-06 54.7 80 42.5
Psat5g221920 Pisum sativum HOM05D000092 ORTHO05D000042 7.3e-06 54.7 128 33.6
QL10p064739 Quercus lobata HOM05D000092 ORTHO05D000042 7.3e-06 54.7 75 41.3
RcHm_v2.0_Chr5g0080281 Rosa chinensis HOM05D000092 ORTHO05D000042 7.3e-06 54.7 108 32.4
VMungo0331G2064 Vigna mungo HOM05D000092 ORTHO05D000042 7.3e-06 54.7 135 28.1
arahy.Tifrunner.gnm1.ann1.IBP7G5 Arachis hypogaea HOM05D000092 ORTHO05D000042 9.6e-06 54.3 89 36.0
Eucgr.G01355 Eucalyptus grandis HOM05D000092 ORTHO05D000042 9.6e-06 54.3 67 46.3
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 9.6e-06 54.3 71 39.4
Manes.07G062356 Manihot esculenta HOM05D000092 ORTHO05D000042 9.6e-06 54.3 76 42.1
Phvul.010G104500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 9.6e-06 54.3 114 30.7
PGR031G3667 Punica granatum HOM05D000092 ORTHO05D000042 9.6e-06 54.3 74 41.9


User provided reference genes

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