Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046178 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 1.6e-129 466.1 229 100.0
Dinv13353 Davidia involucrata HOM05D000590 ORTHO05D006658 6.3e-62 241.5 212 59.9
Actinidia12609 Actinidia chinensis HOM05D000590 ORTHO05D006658 1.4e-61 240.4 212 59.4
Rhsim06G0212500 Rhododendron simsii HOM05D001914 ORTHO05D001983 2.2e-54 216.5 267 46.8
Lsat_1_v5_gn_7_100300 Lactuca sativa HOM05D000590 ORTHO05D006658 7.0e-53 211.5 216 53.7
CiPaw.11G155300 Carya illinoinensis HOM05D000590 ORTHO05D006658 5.9e-52 208.4 224 51.3
RcHm_v2.0_Chr5g0029281 Rosa chinensis HOM05D000590 ORTHO05D006658 1.7e-51 206.8 219 51.1
Potri.011G103100 Populus trichocarpa HOM05D000590 ORTHO05D006658 3.3e-50 202.6 219 52.5
Dinv26700 Davidia involucrata HOM05D000943 ORTHO05D006658 3.6e-49 199.1 175 55.4
FAN21G3792 Fragaria x ananassa HOM05D000590 ORTHO05D006658 4.7e-49 198.7 217 48.4
TAR627G0624 Trochodendron aralioides HOM05D000590 ORTHO05D006658 4.7e-49 198.7 210 51.9
Sabra16G0251900 Salix brachista HOM05D000590 ORTHO05D006658 6.1e-49 198.4 226 50.9
FvH4_3g17570 Fragaria vesca HOM05D000590 ORTHO05D006658 1.0e-48 197.6 217 49.3
FAN16G1913 Fragaria x ananassa HOM05D000590 ORTHO05D006658 1.0e-48 197.6 217 49.3
Prupe.4G155300 Prunus persica HOM05D000590 ORTHO05D006658 2.3e-48 196.4 228 51.3
Sabra11G0082500 Salix brachista HOM05D000590 ORTHO05D006658 3.0e-48 196.1 218 48.2
MELO3C025676.2 Cucumis melo HOM05D000590 ORTHO05D006658 5.2e-48 195.3 219 48.9
Sabra11G0077600 Salix brachista HOM05D000590 ORTHO05D006658 5.2e-48 195.3 220 48.2
CiPaw.12G109900 Carya illinoinensis HOM05D000590 ORTHO05D006658 6.8e-48 194.9 230 48.7
HanXRQChr11g0330421 Helianthus annuus HOM05D000590 ORTHO05D006658 6.8e-48 194.9 218 52.3
Potri.001G382500 Populus trichocarpa HOM05D000590 ORTHO05D006658 6.8e-48 194.9 231 48.9
FAN25G1530 Fragaria x ananassa HOM05D000590 ORTHO05D006658 1.5e-47 193.7 217 47.5
MD03G1251300 Malus domestica HOM05D000590 ORTHO05D006658 2.6e-47 193.0 229 47.2
Oeu005375.1 Olea europaea HOM05D000590 ORTHO05D006658 7.5e-47 191.4 222 47.3
Haze_08447 Corylus avellana HOM05D000590 ORTHO05D006658 9.8e-47 191.0 213 52.1
FAN11G1469 Fragaria x ananassa HOM05D000590 ORTHO05D006658 1.3e-46 190.7 217 47.9
Nn6g34385 Nelumbo nucifera HOM05D000590 ORTHO05D006658 1.7e-46 190.3 236 47.0
CsaV3_4G032770 Cucumis sativus L. HOM05D000590 ORTHO05D006658 2.2e-46 189.9 216 49.1
QL08p025144 Quercus lobata HOM05D000590 ORTHO05D006658 2.8e-46 189.5 234 45.7
vmacro11976 Vaccinium macrocarpon HOM05D000590 ORTHO05D006658 2.8e-46 189.5 278 43.9
COL.COLO4_17463 Corchorus olitorius HOM05D000590 ORTHO05D006658 6.3e-46 188.3 297 38.0
THA.LOC104815580 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 8.3e-46 188.0 229 50.7
Manes.03G078000 Manihot esculenta HOM05D000590 ORTHO05D006658 1.1e-45 187.6 243 48.6
Gohir.A04G045500 Gossypium hirsutum HOM05D000590 ORTHO05D006658 1.4e-45 187.2 254 42.9
MSTRG.6694 Avicennia marina HOM05D000590 ORTHO05D006658 1.8e-45 186.8 209 47.8
ECA236G0454 Erigeron canadensis HOM05D000590 ORTHO05D006658 1.8e-45 186.8 215 49.8
Sed0014657 Sechium edule HOM05D000590 ORTHO05D006658 4.1e-45 185.7 217 47.5
TWI39G0773 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 9.2e-45 184.5 236 43.6
Cpa.g.sc1162.1 Carica papaya HOM05D000590 ORTHO05D006658 3.5e-44 182.6 238 45.0
ClCG11G017110 Citrullus lanatus HOM05D000590 ORTHO05D006658 4.5e-44 182.2 219 49.3
AL3G27050 Arabidopsis lyrata HOM05D000590 ORTHO05D006658 1.0e-43 181.0 219 44.7
CANSAT56G2009 Cannabis sativa HOM05D000590 ORTHO05D006658 1.0e-43 181.0 230 45.2
A05p34710 Brassica napus HOM05D000590 ORTHO05D006658 3.9e-43 179.1 215 44.2
unitig_699.g19239 Utricularia gibba HOM05D000590 ORTHO05D006658 6.6e-43 178.3 216 45.8
Nitab4.5_0003618g0030 Nicotiana tabacum HOM05D001914 ORTHO05D001983 1.9e-42 176.8 211 48.8
BcaC05g29040 Brassica carinata HOM05D000590 ORTHO05D006658 4.3e-42 175.6 235 43.8
BolC5t33934H Brassica oleracea HOM05D000590 ORTHO05D006658 5.6e-42 175.3 221 44.3
Hund10399 Selenicereus undatus HOM05D000590 ORTHO05D006658 9.5e-42 174.5 238 44.5
PGSC0003DMG400007086 Solanum tuberosum HOM05D000590 ORTHO05D006658 1.2e-41 174.1 212 48.1
BraA05t22287Z Brassica rapa HOM05D000590 ORTHO05D006658 2.8e-41 172.9 216 44.0
Thhalv10021064m.g Eutrema salsugineum HOM05D000590 ORTHO05D006658 3.6e-41 172.6 223 45.3
BcaB06g25360 Brassica carinata HOM05D000590 ORTHO05D006658 4.7e-41 172.2 223 43.0
CARHR089680 Cardamine hirsuta HOM05D000590 ORTHO05D006658 6.1e-41 171.8 227 42.7
Solyc07g062100.4 Solanum lycopersicum HOM05D000590 ORTHO05D006658 8.0e-41 171.4 212 46.7
Sopen07g030360 Solanum pennellii HOM05D000590 ORTHO05D006658 1.0e-40 171.0 211 47.4
THA.LOC104822584 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 1.0e-40 171.0 229 43.7
C05p52510 Brassica napus HOM05D000590 ORTHO05D006658 1.8e-40 170.2 221 43.0
AT3G14740 Arabidopsis thaliana HOM05D000590 ORTHO05D006658 4.0e-40 169.1 226 42.9
PSO541G5312 Papaver somniferum HOM05D000590 ORTHO05D006658 4.0e-40 169.1 217 49.8
Sp3g12970 Schrenkiella parvula HOM05D000590 ORTHO05D006658 4.0e-40 169.1 231 43.3
PSO675G2935 Papaver somniferum HOM05D000590 ORTHO05D006658 1.2e-39 167.5 219 45.7
Carub.0003s1441 Capsella rubella HOM05D000590 ORTHO05D006658 1.5e-39 167.2 227 43.2
TWI38G1174 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 2.0e-39 166.8 262 38.5
Migut.H02030 Erythranthe guttata HOM05D000590 ORTHO05D006658 2.6e-39 166.4 213 42.3
Lalb_Chr01g0006941 Lupinus albus HOM05D000590 ORTHO05D006658 2.6e-39 166.4 209 46.9
Duzib213G0379 Durio zibethinus HOM05D000590 ORTHO05D006658 3.4e-39 166.0 282 35.8
Aa31LG8G1960 Aethionema arabicum HOM05D000590 ORTHO05D006658 4.4e-39 165.6 228 42.1
Cc05_g10610 Coffea canephora HOM05D000590 ORTHO05D006658 4.4e-39 165.6 226 49.6
Peaxi162Scf00111g10126 Petunia axillaris HOM05D001914 ORTHO05D001983 1.4e-37 160.6 205 43.4
Ah.06g187630 Amaranthus hybridus HOM05D000590 ORTHO05D006658 2.4e-37 159.8 238 41.2
Sc07g0002360 Simmondsia chinensis HOM05D000590 ORTHO05D006658 2.4e-37 159.8 259 38.6
BcaC09g48444 Brassica carinata HOM05D000590 ORTHO05D006658 4.1e-37 159.1 213 42.7
C01p49700 Brassica napus HOM05D000590 ORTHO05D006658 4.1e-37 159.1 213 42.7
BolC1t04926H Brassica oleracea HOM05D000590 ORTHO05D006658 4.1e-37 159.1 213 42.7
Atru.chr2.1901 Acer truncatum HOM05D000590 ORTHO05D006658 9.2e-37 157.9 208 44.2
PGR031G2043 Punica granatum HOM05D000590 ORTHO05D006658 9.2e-37 157.9 254 40.2
EL10Ac4g08438 Beta vulgaris HOM05D000590 ORTHO05D006658 1.6e-36 157.1 232 44.4
Aqoxy1G01876 Aquilegia oxysepala HOM05D000590 ORTHO05D006658 3.5e-36 156.0 219 48.4
Nitab4.5_0001140g0100 Nicotiana tabacum HOM05D001914 ORTHO05D001983 4.6e-36 155.6 214 43.0
Thecc.07G135100 Theobroma cacao HOM05D000590 ORTHO05D006658 4.6e-36 155.6 287 35.2
Ciclev10021099m.g Citrus clementina HOM05D000590 ORTHO05D006658 7.8e-36 154.8 236 40.3
CAN.G375.56 Capsicum annuum HOM05D000590 ORTHO05D006658 1.0e-35 154.5 205 47.8
Gohir.D05G337300 Gossypium hirsutum HOM05D000590 ORTHO05D006658 1.1e-34 151.0 252 36.9
Gorai.009G361500 Gossypium raimondii HOM05D000590 ORTHO05D006658 1.1e-34 151.0 252 36.9
SGA_v2.0_scaffold130G34256 Striga asiatica HOM05D000590 ORTHO05D006658 2.5e-34 149.8 209 42.6
DCAR_019620 Daucus carota HOM05D000590 ORTHO05D006658 1.6e-33 147.1 236 41.5
Eucgr.F03226 Eucalyptus grandis HOM05D000590 ORTHO05D006658 2.8e-33 146.4 239 39.7
VMungo1127G1365 Vigna mungo HOM05D000590 ORTHO05D006658 6.2e-33 145.2 216 41.7
Ca_12744_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006658 8.0e-33 144.8 217 40.6
AUR62019672 Chenopodium quinoa HOM05D000590 ORTHO05D006658 2.0e-31 140.2 198 43.4
arahy.Tifrunner.gnm1.ann1.4S3ZRX Arachis hypogaea HOM05D000590 ORTHO05D006658 5.4e-29 132.1 217 38.7
Glyma.15G210600 Glycine max HOM05D000590 ORTHO05D006658 7.1e-29 131.7 206 38.3
Glyma.15G211600 Glycine max HOM05D000590 ORTHO05D006658 7.1e-29 131.7 206 38.3
RcHm_v2.0_Chr5g0029121 Rosa chinensis HOM05D000590 ORTHO05D006658 2.1e-28 130.2 92 63.0
Psat4g138760 Pisum sativum HOM05D000590 ORTHO05D006658 7.8e-28 128.3 220 37.7
Lj3g0026308 Lotus japonicus HOM05D000590 ORTHO05D006658 1.3e-27 127.5 240 39.6
arahy.Tifrunner.gnm1.ann1.14DVUV Arachis hypogaea HOM05D000590 ORTHO05D006658 6.6e-27 125.2 199 40.7
AUR62013940 Chenopodium quinoa HOM05D000590 ORTHO05D006658 1.5e-26 124.0 193 39.4
Phvul.011G170000 Phaseolus vulgaris HOM05D000590 ORTHO05D006658 1.2e-25 120.9 215 40.0
TPR.G16489 Trifolium pratense HOM05D000590 ORTHO05D006658 1.6e-25 120.6 213 40.4
Zm00001eb122030 Zea mays HOM05D000590 ORTHO05D006658 2.0e-23 113.6 72 61.1
CDE06G1605 Ceratophyllum demersum HOM05D000590 ORTHO05D006658 4.4e-23 112.5 122 50.0
MD04G1118000 Malus domestica HOM05D000590 ORTHO05D006658 4.4e-23 112.5 136 41.9
CDE02G4695 Ceratophyllum demersum HOM05D000590 ORTHO05D006658 9.9e-23 111.3 72 66.7
SEGI_07265 Sequoiadendron giganteum HOM05D000590 ORTHO05D006658 1.1e-21 107.8 247 32.4
Medtr8g042510 Medicago truncatula HOM05D000590 ORTHO05D006658 2.4e-21 106.7 166 38.0
AagrBONN_evm.TU.Sc2ySwM_344.1598 Anthoceros agrestis HOM05D000590 ORTHO05D006658 4.1e-21 105.9 208 31.7
Aqoxy6G01959 Aquilegia oxysepala HOM05D000590 ORTHO05D006658 1.1e-18 97.8 130 49.2
Pp3c9_22160 Physcomitrium patens HOM05D000590 ORTHO05D006658 4.3e-18 95.9 69 59.4
RcHm_v2.0_Chr5g0029141 Rosa chinensis HOM05D000590 ORTHO05D006658 9.6e-18 94.7 53 71.7
Pp3c15_18060 Physcomitrium patens HOM05D000590 ORTHO05D006658 1.6e-17 94.0 69 59.4
RcHm_v2.0_Chr5g0029161 Rosa chinensis HOM05D000590 ORTHO05D006658 1.4e-13 80.9 48 66.7
GSVIVG01014083001 Vitis vinifera HOM05D000590 ORTHO05D006658 2.4e-13 80.1 46 69.6
PRCOL_00005644 Prasinoderma coloniale HOM05D000590 ORTHO05D006658 7.1e-13 78.6 60 55.0
Lj8P145T49 Lonicera japonica HOM05D000590 ORTHO05D006658 6.6e-11 72.0 46 63.0
SMO351G0114 Selaginella moellendorffii HOM05D003597 ORTHO05D004420 1.1e-10 71.2 76 40.8
FvH4_3g17540 Fragaria vesca HOM05D000590 ORTHO05D006658 1.5e-10 70.9 48 62.5
Cfa024843 Carpinus fangiana HOM05D003597 ORTHO05D006658 5.6e-10 68.9 70 44.3
AagrBONN_evm.TU.Sc2ySwM_344.1361 Anthoceros agrestis HOM05D003597 ORTHO05D004420 1.8e-08 63.9 56 48.2
Dinv20948 Davidia involucrata HOM05D036270 ORTHO05D020554 2.4e-08 63.5 46 60.9
Dinv20995 Davidia involucrata HOM05D036270 ORTHO05D020554 2.4e-08 63.5 46 60.9
MCO03G190 Micromonas commoda HOM05D000590 ORTHO05D006658 9.0e-08 61.6 72 41.7
CBR_g22311 Chara braunii HOM05D003597 ORTHO05D004420 3.4e-07 59.7 69 39.1
MCO03G406 Micromonas commoda HOM05D000104 ORTHO05D008354 5.8e-07 58.9 122 28.7
Pp3c11_12900 Physcomitrium patens HOM05D003597 ORTHO05D004420 5.8e-07 58.9 82 39.0
ATR0051G042 Amborella trichopoda HOM05D000590 ORTHO05D006658 2.2e-06 57.0 46 47.8
AagrBONN_evm.TU.Sc2ySwM_228.4332 Anthoceros agrestis HOM05D003353 ORTHO05D003751 4.9e-06 55.8 54 50.0
MCO07G030 Micromonas commoda HOM05D003597 ORTHO05D006658 4.9e-06 55.8 96 33.3
RcHm_v2.0_Chr5g0041571 Rosa chinensis HOM05D004295 ORTHO05D004901 6.4e-06 55.5 54 40.7
TPR.G5228 Trifolium pratense HOM05D002798 ORTHO05D003052 8.4e-06 55.1 61 39.3


User provided reference genes

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