Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046174 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D014129 5.2e-105 384.4 199 100.0
CSS0010723 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D014129 1.5e-51 206.8 107 94.4
CSS0036734 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D014129 1.5e-51 206.8 107 94.4
CSS0017920 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D014129 3.7e-50 202.2 107 93.5
CSS0024369 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D014129 4.5e-48 195.3 107 88.8
Dinv41384 Davidia involucrata HOM05D000344 ORTHO05D005296 8.3e-26 121.3 110 60.0
Rhsim01G0034200 Rhododendron simsii HOM05D000344 ORTHO05D005296 1.8e-25 120.2 116 62.1
Actinidia04295 Actinidia chinensis HOM05D000344 ORTHO05D005296 2.4e-25 119.8 108 59.3
CiPaw.16G113400 Carya illinoinensis HOM05D000344 ORTHO05D005296 9.5e-22 107.8 96 62.5
GSVIVG01001912001 Vitis vinifera HOM05D000344 ORTHO05D005296 1.2e-21 107.5 110 54.5
GSVIVG01014079001 Vitis vinifera HOM05D000344 ORTHO05D005296 3.6e-21 105.9 111 54.1
Prupe.7G262200 Prunus persica HOM05D000344 ORTHO05D005296 8.0e-21 104.8 112 57.1
Hma1.2p1_0222F.1_g093480 Hydrangea macrophylla HOM05D000344 ORTHO05D005296 2.3e-20 103.2 110 54.5
QL02p093136 Quercus lobata HOM05D000344 ORTHO05D005296 4.4e-19 99.0 114 53.5
Atru.chr7.119 Acer truncatum HOM05D000344 ORTHO05D005296 2.9e-18 96.3 85 63.5
Haze_19214 Corylus avellana HOM05D000344 ORTHO05D014129 3.7e-18 95.9 102 54.9
Cfa020829 Carpinus fangiana HOM05D000344 ORTHO05D014129 6.4e-18 95.1 101 56.4
MD15G1152500 Malus domestica HOM05D000344 ORTHO05D005296 1.8e-17 93.6 78 60.3
MD02G1008300 Malus domestica HOM05D000344 ORTHO05D005296 2.0e-16 90.1 78 57.7
TAR636G0133 Trochodendron aralioides HOM05D000344 ORTHO05D005296 2.0e-16 90.1 110 50.9
Nn2g12347 Nelumbo nucifera HOM05D000344 ORTHO05D005296 3.5e-16 89.4 110 49.1
Lj9A682T45 Lonicera japonica HOM05D000344 ORTHO05D014129 7.8e-16 88.2 100 51.0
Hma1.2p1_0028F.1_g017520 Hydrangea macrophylla HOM05D000344 ORTHO05D014129 2.3e-15 86.7 102 50.0
TWI34G1136 Tripterygium wilfordii HOM05D000344 ORTHO05D005296 2.3e-15 86.7 95 53.7
CANSAT11G2628 Cannabis sativa HOM05D000344 ORTHO05D005296 3.9e-15 85.9 114 48.2
FvH4_1g01010 Fragaria vesca HOM05D000344 ORTHO05D005296 5.0e-15 85.5 98 51.0
FAN28G1751 Fragaria x ananassa HOM05D000344 ORTHO05D005296 5.0e-15 85.5 98 51.0
Duzib168G1790 Durio zibethinus HOM05D000344 ORTHO05D005296 6.6e-15 85.1 85 55.3
Thecc.09G031500 Theobroma cacao HOM05D000344 ORTHO05D005296 8.6e-15 84.7 82 53.7
CiPaw.15G176800 Carya illinoinensis HOM05D000344 ORTHO05D005296 1.1e-14 84.3 93 53.8
Ciclev10007375m.g Citrus clementina HOM05D000344 ORTHO05D005296 2.5e-14 83.2 82 56.1
Aa31LG3G13780 Aethionema arabicum HOM05D000344 ORTHO05D005296 4.3e-14 82.4 106 44.3
RcHm_v2.0_Chr2g0085751 Rosa chinensis HOM05D000344 ORTHO05D005296 7.3e-14 81.6 110 47.3
Cpa.g.sc46.148 Carica papaya HOM05D000344 ORTHO05D005296 9.5e-14 81.3 107 47.7
Manes.06G036300 Manihot esculenta HOM05D000344 ORTHO05D005296 2.1e-13 80.1 111 45.9
ClCG02G014550 Citrullus lanatus HOM05D000344 ORTHO05D005296 2.8e-13 79.7 109 42.2
Glyma.02G203500 Glycine max HOM05D000344 ORTHO05D005296 2.8e-13 79.7 108 47.2
ECA234G2365 Erigeron canadensis HOM05D000344 ORTHO05D004969 3.6e-13 79.3 112 44.6
COL.COLO4_18799 Corchorus olitorius HOM05D000344 ORTHO05D005296 4.7e-13 79.0 79 51.9
AL8G34070 Arabidopsis lyrata HOM05D000344 ORTHO05D005296 1.4e-12 77.4 85 47.1
Glyma.17G074200 Glycine max HOM05D000344 ORTHO05D005296 1.4e-12 77.4 109 45.0
Carub.0008s1852 Capsella rubella HOM05D000344 ORTHO05D005296 2.3e-12 76.6 85 45.9
Ca_21122_v3 Cicer arietinum L. HOM05D000344 ORTHO05D005296 2.3e-12 76.6 107 45.8
Duzib187G1763 Durio zibethinus HOM05D000344 ORTHO05D005296 2.3e-12 76.6 110 45.5
FAN26G2818 Fragaria x ananassa HOM05D000344 ORTHO05D005296 2.3e-12 76.6 80 55.0
CsaV3_2G007460 Cucumis sativus L. HOM05D000344 ORTHO05D005296 4.0e-12 75.9 96 44.8
PGR142G4209 Punica granatum HOM05D000344 ORTHO05D005296 4.0e-12 75.9 107 44.9
TAR625G0471 Trochodendron aralioides HOM05D000344 ORTHO05D005296 4.0e-12 75.9 113 46.9
CAN.G160.72 Capsicum annuum HOM05D000344 ORTHO05D005296 5.2e-12 75.5 88 47.7
THA.LOC104817823 Tarenaya hassleriana HOM05D000344 ORTHO05D005296 6.8e-12 75.1 97 45.4
Lj4g0019888 Lotus japonicus HOM05D000344 ORTHO05D005296 8.9e-12 74.7 91 49.5
Sed0023248 Sechium edule HOM05D000344 ORTHO05D005296 8.9e-12 74.7 109 40.4
PGSC0003DMG400011136 Solanum tuberosum HOM05D000344 ORTHO05D005296 8.9e-12 74.7 96 47.9
Thhalv10012558m.g Eutrema salsugineum HOM05D000344 ORTHO05D005296 1.2e-11 74.3 101 43.6
MELO3C004139.2 Cucumis melo HOM05D000344 ORTHO05D005296 1.5e-11 73.9 96 43.8
Duzib150G1122 Durio zibethinus HOM05D000344 ORTHO05D005296 1.5e-11 73.9 82 52.4
Lsat_1_v5_gn_5_91020 Lactuca sativa HOM05D000344 ORTHO05D005296 1.5e-11 73.9 124 46.8
AT5G57990 Arabidopsis thaliana HOM05D000344 ORTHO05D005296 2.6e-11 73.2 110 40.9
Lalb_Chr12g0198671 Lupinus albus HOM05D000344 ORTHO05D005296 2.6e-11 73.2 107 40.2
Oeu027650.1 Olea europaea HOM05D000344 ORTHO05D005296 2.6e-11 73.2 99 45.5
THA.LOC104811836 Tarenaya hassleriana HOM05D000344 ORTHO05D005296 2.6e-11 73.2 78 46.2
Psat4g109520 Pisum sativum HOM05D000344 ORTHO05D005296 3.4e-11 72.8 107 46.7
C03p14670 Brassica napus HOM05D000344 ORTHO05D005296 4.4e-11 72.4 85 44.7
CARHR271780 Cardamine hirsuta HOM05D000344 ORTHO05D005296 4.4e-11 72.4 101 40.6
Medtr4g130940 Medicago truncatula HOM05D000344 ORTHO05D005296 4.4e-11 72.4 107 44.9
BolC3t13908H Brassica oleracea HOM05D000344 ORTHO05D005296 7.5e-11 71.6 85 43.5
Sp6g19650 Schrenkiella parvula HOM05D000344 ORTHO05D005296 7.5e-11 71.6 101 42.6
HanXRQChr10g0313751 Helianthus annuus HOM05D000344 ORTHO05D005296 9.8e-11 71.2 82 54.9
DCAR_019390 Daucus carota HOM05D000344 ORTHO05D005296 1.3e-10 70.9 81 45.7
TPR.G24857 Trifolium pratense HOM05D000344 ORTHO05D005296 1.7e-10 70.5 83 50.6
Sopen07g001630 Solanum pennellii HOM05D000344 ORTHO05D005296 2.9e-10 69.7 95 45.3
Sabra18G0091500 Salix brachista HOM05D000344 ORTHO05D005296 3.7e-10 69.3 83 44.6
Nitab4.5_0006879g0010 Nicotiana tabacum HOM05D000344 ORTHO05D005296 4.9e-10 68.9 83 45.8
VMungo1215G2428 Vigna mungo HOM05D000344 ORTHO05D005296 4.9e-10 68.9 102 44.1
A03p12460 Brassica napus HOM05D000344 ORTHO05D005296 6.4e-10 68.6 85 43.5
BraA03t10561Z Brassica rapa HOM05D000344 ORTHO05D005296 6.4e-10 68.6 85 43.5
Phvul.003G156400 Phaseolus vulgaris HOM05D000344 ORTHO05D005296 6.4e-10 68.6 95 48.4
Solyc07g005530.4 Solanum lycopersicum HOM05D000344 ORTHO05D005296 8.3e-10 68.2 96 45.8
arahy.Tifrunner.gnm1.ann1.704TPP Arachis hypogaea HOM05D000344 ORTHO05D005296 1.1e-09 67.8 89 44.9
MSTRG.10689 Avicennia marina HOM05D000344 ORTHO05D005296 1.1e-09 67.8 95 45.3
Potri.006G185200 Populus trichocarpa HOM05D000344 ORTHO05D005296 1.1e-09 67.8 84 42.9
arahy.Tifrunner.gnm1.ann1.ALG29P Arachis hypogaea HOM05D000344 ORTHO05D005296 3.2e-09 66.2 105 41.9
Nitab4.5_0009049g0030 Nicotiana tabacum HOM05D000344 ORTHO05D005296 4.1e-09 65.9 93 44.1
Cc11_g03310 Coffea canephora HOM05D000344 ORTHO05D005296 5.4e-09 65.5 121 41.3
Lj4g0022650 Lotus japonicus HOM05D000344 ORTHO05D005296 5.4e-09 65.5 95 42.1
Sabra06G0140700 Salix brachista HOM05D000344 ORTHO05D005296 5.4e-09 65.5 84 44.0
Gohir.A05G052400 Gossypium hirsutum HOM05D000344 ORTHO05D005296 9.2e-09 64.7 82 45.1
Sed0018237 Sechium edule HOM05D000344 ORTHO05D005296 9.2e-09 64.7 89 44.9
Hund12031 Selenicereus undatus HOM05D000344 ORTHO05D005296 9.2e-09 64.7 78 48.7
Migut.K00330 Erythranthe guttata HOM05D000344 ORTHO05D005296 1.2e-08 64.3 88 40.9
Potri.018G107500 Populus trichocarpa HOM05D000344 ORTHO05D005296 1.6e-08 63.9 83 42.2
SGA_v2.0_scaffold12G05989 Striga asiatica HOM05D000344 ORTHO05D005296 2.0e-08 63.5 123 38.2
Ah.08g212460 Amaranthus hybridus HOM05D000344 ORTHO05D005296 4.6e-08 62.4 90 43.3
Oeu052192.1 Olea europaea HOM05D000344 ORTHO05D005296 4.6e-08 62.4 101 40.6
Sc17g0006710 Simmondsia chinensis HOM05D000344 ORTHO05D005296 6.0e-08 62.0 81 43.2
Gohir.D05G053900 Gossypium hirsutum HOM05D000344 ORTHO05D005296 1.0e-07 61.2 82 43.9
Gorai.009G055700 Gossypium raimondii HOM05D000344 ORTHO05D005296 1.0e-07 61.2 82 43.9
Eucgr.C00353 Eucalyptus grandis HOM05D000344 ORTHO05D005296 2.3e-07 60.1 97 38.1
CDE02G1206 Ceratophyllum demersum HOM05D000344 ORTHO05D005296 3.9e-07 59.3 147 35.4
SalBow5G5380 Salvia bowleyana HOM05D000344 ORTHO05D005296 5.0e-07 58.9 108 39.8
SalBow1G0321 Salvia bowleyana HOM05D000344 ORTHO05D005296 1.5e-06 57.4 108 39.8
Aqoxy1G03315 Aquilegia oxysepala HOM05D000344 ORTHO05D005296 5.6e-06 55.5 89 38.2


User provided reference genes

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