Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046147 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 1.6e-42 175.6 86 100.0
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 3.7e-15 84.7 67 64.2
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 6.3e-15 84.0 67 62.7
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 5.4e-14 80.9 73 60.3
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 1.5e-11 72.8 68 60.3
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 1.9e-11 72.4 56 67.9
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 2.5e-11 72.0 68 60.3
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 4.2e-11 71.2 67 62.7
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 4.2e-11 71.2 67 59.7
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 5.5e-11 70.9 68 61.8
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 5.5e-11 70.9 67 59.7
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 1.6e-10 69.3 63 60.3
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.8e-10 68.6 67 61.2
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 2.8e-10 68.6 68 57.4
MELO3C012630.2 Cucumis melo HOM05D002385 ORTHO05D002245 2.8e-10 68.6 80 55.0
CsaV3_7G022690 Cucumis sativus L. HOM05D002385 ORTHO05D002245 1.0e-09 66.6 78 55.1
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 1.4e-09 66.2 68 60.3
vmacro09249 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 1.4e-09 66.2 67 56.7
CSS0047514 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 1.8e-09 65.9 67 59.7
Rhsim06G0138300 Rhododendron simsii HOM05D002385 ORTHO05D002245 1.8e-09 65.9 66 59.1
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.8e-09 65.9 58 55.2
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.8e-09 65.9 58 55.2
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 2.3e-09 65.5 69 62.3
CSS0045060 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 3.0e-09 65.1 67 59.7
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 4.0e-09 64.7 52 65.4
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 4.0e-09 64.7 71 50.7
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 5.2e-09 64.3 67 56.7
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 1.5e-08 62.8 65 53.8
Peaxi162Scf00322g00010 Petunia axillaris HOM05D002385 ORTHO05D002245 2.0e-08 62.4 67 49.3
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 2.0e-08 62.4 68 52.9
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 2.6e-08 62.0 74 54.1
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 4.4e-08 61.2 67 53.7
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 5.7e-08 60.8 63 55.6
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 9.8e-08 60.1 67 52.2
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.3e-07 59.7 65 50.8
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.3e-07 59.7 65 50.8
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 1.7e-07 59.3 68 57.4
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.7e-07 59.3 67 52.2
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 2.2e-07 58.9 62 51.6
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 2.2e-07 58.9 63 52.4
Actinidia11007 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.8e-07 58.5 63 54.0
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 3.7e-07 58.2 70 50.0
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 4.9e-07 57.8 45 60.0
GSVIVG01015788001 Vitis vinifera HOM05D002385 ORTHO05D002245 4.9e-07 57.8 67 53.7
Cfa023570 Carpinus fangiana HOM05D002385 ORTHO05D002245 6.3e-07 57.4 47 57.4
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 6.3e-07 57.4 67 55.2
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 8.3e-07 57.0 69 50.7
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 8.3e-07 57.0 69 50.7
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 8.3e-07 57.0 69 50.7
Glyma.08G171300 Glycine max HOM05D002385 ORTHO05D002245 8.3e-07 57.0 71 40.8
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 1.1e-06 56.6 68 51.5
Phvul.005G057200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 1.1e-06 56.6 65 46.2
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 1.1e-06 56.6 63 50.8
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.1e-06 56.6 67 53.7
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 1.4e-06 56.2 61 49.2
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 1.4e-06 56.2 63 50.8
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 1.4e-06 56.2 54 55.6
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 1.8e-06 55.8 63 50.8
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 1.8e-06 55.8 63 50.8
Cfa021234 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.4e-06 55.5 46 58.7
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 2.4e-06 55.5 60 51.7
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 2.4e-06 55.5 68 47.1
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 2.4e-06 55.5 69 49.3
AT2G32190 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 3.1e-06 55.1 75 46.7
Migut.M00099 Erythranthe guttata HOM05D002385 ORTHO05D002245 3.1e-06 55.1 55 54.5
BcaB04g20534 Brassica carinata HOM05D002385 ORTHO05D002245 4.1e-06 54.7 72 40.3
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.1e-06 54.7 55 56.4
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 4.1e-06 54.7 45 60.0
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 4.1e-06 54.7 60 51.7
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 4.1e-06 54.7 71 46.5
A04p24750 Brassica napus HOM05D002385 ORTHO05D002245 5.4e-06 54.3 76 43.4
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 5.4e-06 54.3 45 60.0
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 5.4e-06 54.3 45 60.0
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 7.0e-06 53.9 68 45.6
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 7.0e-06 53.9 68 45.6
Sed0001434 Sechium edule HOM05D002385 ORTHO05D002245 7.0e-06 53.9 60 51.7
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 9.2e-06 53.5 53 52.8
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 9.2e-06 53.5 79 46.8


User provided reference genes

Program Settings