Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046137 Camellia sinensis var. sinensis HOM05D000204 ORTHO05D008315 2.6e-27 124.8 68 100.0
Actinidia06602 Actinidia chinensis HOM05D000204 ORTHO05D008315 2.7e-21 104.8 51 96.1
Sabra16G0192400 Salix brachista HOM05D000204 ORTHO05D008315 2.7e-21 104.8 51 96.1
Aqoxy6G00191 Aquilegia oxysepala HOM05D000204 ORTHO05D008315 1.4e-20 102.4 51 94.1
Potri.001G306300 Populus trichocarpa HOM05D000204 ORTHO05D008315 3.0e-20 101.3 51 94.1
QL10p039699 Quercus lobata HOM05D000204 ORTHO05D008315 4.0e-20 100.9 51 92.2
Actinidia20060 Actinidia chinensis HOM05D008700 ORTHO05D010645 1.2e-19 99.4 51 94.1
CiPaw.03G255200 Carya illinoinensis HOM05D000057 ORTHO05D008315 2.0e-19 98.6 51 90.2
Rhsim10G0130800 Rhododendron simsii HOM05D000204 ORTHO05D008315 2.0e-19 98.6 51 90.2
Nn5g28239 Nelumbo nucifera HOM05D000204 ORTHO05D008315 3.4e-19 97.8 51 90.2
Potri.019G002201 Populus trichocarpa HOM05D000204 ORTHO05D008315 5.7e-19 97.1 49 91.8
Dinv06649 Davidia involucrata HOM05D000204 ORTHO05D008315 9.7e-19 96.3 51 86.3
CiPaw.04G179800 Carya illinoinensis HOM05D000204 ORTHO05D008315 3.7e-18 94.4 45 97.8
Nn1g08765 Nelumbo nucifera HOM05D000204 ORTHO05D008315 4.8e-18 94.0 50 90.0
Sabra19G0015200 Salix brachista HOM05D047932 ORTHO05D008315 6.3e-18 93.6 50 88.0
MBI03_g33034_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008315 8.3e-18 93.2 52 86.5
MBI03_g47845_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008315 8.3e-18 93.2 52 86.5
MBI06_g33557_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008315 1.1e-17 92.8 45 95.6
PSO782G3406 Papaver somniferum HOM05D000204 ORTHO05D008315 1.1e-17 92.8 51 88.2
PGR102G2789 Punica granatum HOM05D000204 ORTHO05D008315 1.8e-17 92.0 52 80.8
Duzib264G1140 Durio zibethinus HOM05D000057 ORTHO05D008315 2.4e-17 91.7 51 88.2
COL.COLO4_12117 Corchorus olitorius HOM05D000057 ORTHO05D008315 5.9e-16 87.0 52 82.7
Gohir.D09G005600 Gossypium hirsutum HOM05D000057 ORTHO05D008315 1.0e-15 86.3 52 78.8
Gorai.006G007200 Gossypium raimondii HOM05D000057 ORTHO05D008315 1.0e-15 86.3 52 78.8
ClCG04G001150 Citrullus lanatus HOM05D000204 ORTHO05D008315 1.3e-15 85.9 51 74.5
VMungo1309G1695 Vigna mungo HOM05D000204 ORTHO05D008315 1.3e-15 85.9 54 81.5
Lalb_Chr11g0068771 Lupinus albus HOM05D000204 ORTHO05D008315 1.7e-15 85.5 56 76.8
Phvul.009G151600 Phaseolus vulgaris HOM05D000204 ORTHO05D008315 1.7e-15 85.5 54 79.6
Ca_17008_v3 Cicer arietinum L. HOM05D000204 ORTHO05D008315 2.2e-15 85.1 54 75.9
Ciclev10026768m.g Citrus clementina HOM05D000057 ORTHO05D008315 3.8e-15 84.3 53 77.4
Glyma.04G206800 Glycine max HOM05D000204 ORTHO05D008315 3.8e-15 84.3 54 79.6
Nitab4.5_0000496g0160 Nicotiana tabacum HOM05D000204 ORTHO05D008315 3.8e-15 84.3 45 80.0
Oeu019905.1 Olea europaea HOM05D000204 ORTHO05D008315 3.8e-15 84.3 54 79.6
Thecc.01G142500 Theobroma cacao HOM05D000057 ORTHO05D008315 3.8e-15 84.3 50 82.0
Migut.L00258 Erythranthe guttata HOM05D000204 ORTHO05D008315 5.0e-15 84.0 53 73.6
Hma1.2p1_0451F.1_g155830 Hydrangea macrophylla HOM05D000057 ORTHO05D008315 5.0e-15 84.0 53 83.0
CsaV3_4G031250 Cucumis sativus L. HOM05D000204 ORTHO05D008315 6.5e-15 83.6 51 74.5
Duzib147G0176 Durio zibethinus HOM05D000204 ORTHO05D008315 6.5e-15 83.6 46 89.1
Medtr3g097120 Medicago truncatula HOM05D000204 ORTHO05D008315 6.5e-15 83.6 54 74.1
Oeu042311.1 Olea europaea HOM05D000204 ORTHO05D008315 6.5e-15 83.6 52 76.9
Peaxi162Scf01323g00001 Petunia axillaris HOM05D000204 ORTHO05D008315 8.5e-15 83.2 45 77.8
Sed0025105 Sechium edule HOM05D000057 ORTHO05D008315 8.5e-15 83.2 47 78.7
PGSC0003DMG400023325 Solanum tuberosum HOM05D009740 ORTHO05D008315 8.5e-15 83.2 45 77.8
TPR.G7869 Trifolium pratense HOM05D000204 ORTHO05D008315 8.5e-15 83.2 55 72.7
CAN.G1156.39 Capsicum annuum HOM05D000204 ORTHO05D008315 1.1e-14 82.8 45 77.8
Cpa.g.sc37.57 Carica papaya HOM05D000204 ORTHO05D008315 1.1e-14 82.8 49 75.5
MELO3C009007.2 Cucumis melo HOM05D000204 ORTHO05D008315 1.5e-14 82.4 51 72.5
PSO170G5272 Papaver somniferum HOM05D000057 ORTHO05D008315 1.5e-14 82.4 52 82.7
TWI79G0854 Tripterygium wilfordii HOM05D000204 ORTHO05D008315 1.5e-14 82.4 45 82.2
TWI31G0726 Tripterygium wilfordii HOM05D000204 ORTHO05D008315 1.9e-14 82.0 58 70.7
Lalb_Chr08g0237921 Lupinus albus HOM05D000204 ORTHO05D008315 2.5e-14 81.6 51 78.4
Oeu042310.1 Olea europaea HOM05D000204 ORTHO05D008315 2.5e-14 81.6 52 75.0
Nitab4.5_0015078g0010 Nicotiana tabacum HOM05D000204 ORTHO05D008315 3.2e-14 81.3 45 77.8
SGA_v2.0_scaffold20G09004 Striga asiatica HOM05D000057 ORTHO05D008315 3.2e-14 81.3 51 72.5
Gohir.A05G382600 Gossypium hirsutum HOM05D000204 ORTHO05D008315 4.2e-14 80.9 51 78.4
Gohir.D04G032600 Gossypium hirsutum HOM05D000204 ORTHO05D008315 4.2e-14 80.9 51 78.4
Gorai.012G037000 Gossypium raimondii HOM05D000204 ORTHO05D008315 4.2e-14 80.9 51 78.4
PGSC0003DMG400023538 Solanum tuberosum HOM05D000057 ORTHO05D008315 4.2e-14 80.9 45 75.6
Sed0008813 Sechium edule HOM05D000204 ORTHO05D008315 5.5e-14 80.5 51 70.6
Cpa.g.sc37.56 Carica papaya HOM05D000204 ORTHO05D008315 7.2e-14 80.1 57 68.4
Glyma.06G158700 Glycine max HOM05D000204 ORTHO05D008315 7.2e-14 80.1 54 77.8
Solyc05g056440.3 Solanum lycopersicum HOM05D000204 ORTHO05D008315 9.4e-14 79.7 45 75.6
Cc00_g29740 Coffea canephora HOM05D000204 ORTHO05D008315 1.2e-13 79.3 46 84.8
Sed0019887 Sechium edule HOM05D000057 ORTHO05D008315 1.2e-13 79.3 51 70.6
CAN.G1156.40 Capsicum annuum HOM05D000204 ORTHO05D008315 2.1e-13 78.6 46 76.1
Lj1g0002911 Lotus japonicus HOM05D000204 ORTHO05D008315 2.1e-13 78.6 63 66.7
Zm00001eb193520 Zea mays HOM05D000057 ORTHO05D008315 3.6e-13 77.8 49 73.5
Oeu037840.1 Olea europaea HOM05D000057 ORTHO05D008315 8.0e-13 76.6 52 71.2
Peaxi162Scf00906g00002 Petunia axillaris HOM05D000204 ORTHO05D008315 1.0e-12 76.3 43 76.7
Sc09g0002040 Simmondsia chinensis HOM05D000057 ORTHO05D008315 1.0e-12 76.3 52 67.3
Migut.H00862 Erythranthe guttata HOM05D000204 ORTHO05D008315 1.4e-12 75.9 45 77.8
Os02g0769100 Oryza sativa ssp. japonica HOM05D000204 ORTHO05D008315 1.4e-12 75.9 54 68.5
Solyc05g056430.3 Solanum lycopersicum HOM05D000057 ORTHO05D008315 1.4e-12 75.9 47 72.3
Zm00001eb256180 Zea mays HOM05D000057 ORTHO05D008315 1.4e-12 75.9 49 73.5
Migut.H00852 Erythranthe guttata HOM05D000204 ORTHO05D008315 1.8e-12 75.5 59 67.8
Sopen05g034820 Solanum pennellii HOM05D000057 ORTHO05D008315 1.8e-12 75.5 48 70.8
Migut.L00259 Erythranthe guttata HOM05D000204 ORTHO05D008315 2.3e-12 75.1 52 69.2
DCAR_019972 Daucus carota HOM05D000204 ORTHO05D008315 4.0e-12 74.3 45 73.3
Sopen05g034830 Solanum pennellii HOM05D000204 ORTHO05D008315 4.0e-12 74.3 45 75.6
DCAR_009605 Daucus carota HOM05D000057 ORTHO05D008315 6.8e-12 73.6 48 68.8
Aqoxy5G02346 Aquilegia oxysepala HOM05D000057 ORTHO05D008315 8.8e-12 73.2 55 65.5
Cc07_g19210 Coffea canephora HOM05D000204 ORTHO05D008315 1.2e-11 72.8 46 78.3
Oeu058304.1 Olea europaea HOM05D000204 ORTHO05D008315 2.0e-11 72.0 50 72.0
Glyma.05G196300 Glycine max HOM05D000204 ORTHO05D008315 3.4e-11 71.2 45 75.6
SalBow7G1467 Salvia bowleyana HOM05D000204 ORTHO05D008315 4.4e-11 70.9 50 66.0
Migut.H00851 Erythranthe guttata HOM05D000057 ORTHO05D008315 5.7e-11 70.5 59 64.4
Migut.H00857 Erythranthe guttata HOM05D000204 ORTHO05D008315 5.7e-11 70.5 58 62.1
Migut.H00854 Erythranthe guttata HOM05D000204 ORTHO05D008315 7.5e-11 70.1 58 62.1
Migut.H01119 Erythranthe guttata HOM05D000057 ORTHO05D008315 7.5e-11 70.1 59 64.4
Sc16g0009710 Simmondsia chinensis HOM05D000204 ORTHO05D008315 7.5e-11 70.1 55 67.3
Migut.H00853 Erythranthe guttata HOM05D000057 ORTHO05D008315 9.8e-11 69.7 61 62.3
VMungo0251G3337 Vigna mungo HOM05D000204 ORTHO05D008315 1.7e-10 68.9 48 70.8
DCAR_019971 Daucus carota HOM05D000057 ORTHO05D008315 2.2e-10 68.6 48 68.8
unitig_699.g19723 Utricularia gibba HOM05D000057 ORTHO05D008315 2.8e-10 68.2 47 68.1
Oeu058308.1 Olea europaea HOM05D000204 ORTHO05D008315 3.7e-10 67.8 50 70.0
Migut.H00858 Erythranthe guttata HOM05D000204 ORTHO05D008315 4.8e-10 67.4 60 55.0
Phvul.002G276800 Phaseolus vulgaris HOM05D000204 ORTHO05D008315 4.8e-10 67.4 48 68.8
Migut.H00860 Erythranthe guttata HOM05D000204 ORTHO05D008315 6.3e-10 67.0 60 55.0
DCAR_009607 Daucus carota HOM05D000057 ORTHO05D008315 1.1e-09 66.2 48 68.8
Glyma.08G004100 Glycine max HOM05D000204 ORTHO05D008315 1.1e-09 66.2 48 70.8
Medtr8g094980 Medicago truncatula HOM05D000204 ORTHO05D008315 1.1e-09 66.2 53 66.0
Migut.H00847 Erythranthe guttata HOM05D000204 ORTHO05D008315 1.8e-09 65.5 65 50.8
Migut.H01120 Erythranthe guttata HOM05D000204 ORTHO05D008315 2.4e-09 65.1 59 55.9
Migut.H00859 Erythranthe guttata HOM05D000204 ORTHO05D008315 4.1e-09 64.3 61 54.1
Migut.H01117 Erythranthe guttata HOM05D000204 ORTHO05D008315 4.1e-09 64.3 60 58.3
Migut.H00855 Erythranthe guttata HOM05D000204 ORTHO05D008315 9.1e-09 63.2 60 55.0
unitig_52.g17241 Utricularia gibba HOM05D000057 ORTHO05D008315 1.2e-08 62.8 46 60.9
Migut.H01118 Erythranthe guttata HOM05D000057 ORTHO05D008315 1.6e-08 62.4 61 59.0
MBI06_g44334_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D008315 2.0e-08 62.0 29 96.6
DCAR_019973 Daucus carota HOM05D000057 ORTHO05D008315 2.7e-08 61.6 45 66.7
EL10Ac4g09650 Beta vulgaris HOM05D000204 ORTHO05D008315 3.5e-08 61.2 66 51.5
HPP92_004121 Vanilla planifolia HOM05D000204 ORTHO05D008315 5.9e-08 60.5 51 58.8
Lj4g0001016 Lotus japonicus HOM05D000204 ORTHO05D008315 1.0e-07 59.7 46 67.4
ATR0684G113 Amborella trichopoda HOM05D000204 ORTHO05D008315 2.3e-07 58.5 57 59.6
Migut.H00856 Erythranthe guttata HOM05D000204 ORTHO05D008315 6.6e-07 57.0 59 47.5
Psat7g042400 Pisum sativum HOM05D000204 ORTHO05D008315 8.6e-07 56.6 52 57.7
Migut.H00861 Erythranthe guttata HOM05D000204 ORTHO05D008315 2.5e-06 55.1 56 51.8
Ah.06g188460 Amaranthus hybridus HOM05D000204 ORTHO05D008315 3.3e-06 54.7 51 56.9
AUR62006917 Chenopodium quinoa HOM05D000204 ORTHO05D008315 3.3e-06 54.7 70 45.7
HPP92_009364 Vanilla planifolia HOM05D000204 ORTHO05D008315 3.3e-06 54.7 52 53.8
HPP92_007407 Vanilla planifolia HOM05D000204 ORTHO05D001897 7.2e-06 53.5 48 47.9
CiPaw.13G034000 Carya illinoinensis HOM05D000057 ORTHO05D000021 9.5e-06 53.1 50 54.0


User provided reference genes

Program Settings