Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046122 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D006528 7.8e-74 280.4 145 100.0
QL02p013914 Quercus lobata HOM05D000192 ORTHO05D006528 4.2e-35 151.8 147 62.6
Actinidia37969 Actinidia chinensis HOM05D000192 ORTHO05D006528 1.2e-34 150.2 143 58.7
Sabra05G0193000 Salix brachista HOM05D000192 ORTHO05D006528 4.6e-34 148.3 150 58.0
Cfa014058 Carpinus fangiana HOM05D000192 ORTHO05D006528 3.9e-33 145.2 148 59.5
Cfa014060 Carpinus fangiana HOM05D000192 ORTHO05D006528 3.9e-33 145.2 148 58.1
Haze_22755 Corylus avellana HOM05D000192 ORTHO05D006528 6.7e-33 144.4 148 58.8
Rhsim07G0254600 Rhododendron simsii HOM05D000192 ORTHO05D006528 1.1e-32 143.7 146 58.9
Potri.005G249500 Populus trichocarpa HOM05D000192 ORTHO05D006528 4.3e-32 141.7 150 56.7
CiPaw.07G139700 Carya illinoinensis HOM05D000192 ORTHO05D006528 7.4e-32 141.0 148 59.5
Thecc.08G057400 Theobroma cacao HOM05D000192 ORTHO05D006528 9.6e-32 140.6 149 55.7
Ciclev10003381m.g Citrus clementina HOM05D000192 ORTHO05D006528 1.3e-31 140.2 149 56.4
vmacro04400 Vaccinium macrocarpon HOM05D000192 ORTHO05D006528 1.3e-31 140.2 146 58.9
COL.COLO4_03996 Corchorus olitorius HOM05D000192 ORTHO05D006528 2.8e-31 139.0 149 55.0
Duzib093G0457 Durio zibethinus HOM05D000192 ORTHO05D006528 6.2e-31 137.9 148 56.1
Peaxi162Scf01481g00033 Petunia axillaris HOM05D000192 ORTHO05D006528 1.4e-30 136.7 152 56.6
Potri.002G011600 Populus trichocarpa HOM05D000192 ORTHO05D006528 1.4e-30 136.7 150 58.7
Rhsim07G0254500 Rhododendron simsii HOM05D000192 ORTHO05D006528 1.4e-30 136.7 148 57.4
Manes.18G006100 Manihot esculenta HOM05D000192 ORTHO05D006528 2.4e-30 136.0 151 59.6
Manes.05G135200 Manihot esculenta HOM05D000192 ORTHO05D006528 3.1e-30 135.6 152 57.9
Gohir.D01G093300 Gossypium hirsutum HOM05D000192 ORTHO05D006528 4.0e-30 135.2 149 56.4
Gorai.002G118700 Gossypium raimondii HOM05D000192 ORTHO05D006528 5.3e-30 134.8 149 55.7
Atru.chr13.154 Acer truncatum HOM05D000192 ORTHO05D006528 6.9e-30 134.4 152 53.3
Duzib041G0263 Durio zibethinus HOM05D000192 ORTHO05D006528 2.0e-29 132.9 149 53.7
TWI56G1025 Tripterygium wilfordii HOM05D000192 ORTHO05D006528 5.8e-29 131.3 144 58.3
TAR628G1559 Trochodendron aralioides HOM05D000192 ORTHO05D006528 7.6e-29 131.0 149 56.4
Gohir.A01G106900 Gossypium hirsutum HOM05D000192 ORTHO05D006528 9.9e-29 130.6 149 55.0
Oeu011326.1 Olea europaea HOM05D000192 ORTHO05D006528 9.9e-29 130.6 146 54.8
Rhsim07G0254400 Rhododendron simsii HOM05D000192 ORTHO05D006528 6.4e-28 127.9 146 56.2
Gohir.A05G180100 Gossypium hirsutum HOM05D000192 ORTHO05D006528 1.9e-27 126.3 147 51.7
Oeu004529.1 Olea europaea HOM05D000192 ORTHO05D006528 2.4e-27 125.9 145 53.1
Sabra02G0009100 Salix brachista HOM05D000192 ORTHO05D006528 2.4e-27 125.9 141 56.0
Nn5g30919 Nelumbo nucifera HOM05D000192 ORTHO05D006528 3.2e-27 125.6 155 52.9
Gohir.D05G183100 Gossypium hirsutum HOM05D000192 ORTHO05D006528 4.2e-27 125.2 147 51.0
Sabra02G0009200 Salix brachista HOM05D000192 ORTHO05D006528 1.2e-26 123.6 141 56.0
TAR376G0017 Trochodendron aralioides HOM05D000192 ORTHO05D006528 1.2e-26 123.6 149 53.0
FvH4_2g37580 Fragaria vesca HOM05D000192 ORTHO05D006528 1.6e-26 123.2 151 54.3
FAN15G0671 Fragaria x ananassa HOM05D000192 ORTHO05D006528 2.7e-26 122.5 151 54.3
FAN27G2646 Fragaria x ananassa HOM05D000192 ORTHO05D006528 2.7e-26 122.5 151 53.6
Nitab4.5_0000337g0210 Nicotiana tabacum HOM05D000192 ORTHO05D006528 6.0e-26 121.3 151 55.0
RcHm_v2.0_Chr6g0304151 Rosa chinensis HOM05D000192 ORTHO05D006528 6.0e-26 121.3 151 52.3
DCAR_009526 Daucus carota HOM05D000192 ORTHO05D006528 1.3e-25 120.2 152 44.7
PGSC0003DMG400009973 Solanum tuberosum HOM05D000192 ORTHO05D006528 1.3e-25 120.2 152 50.0
Solyc04g082270.3 Solanum lycopersicum HOM05D000192 ORTHO05D006528 1.8e-25 119.8 152 50.0
Sopen04g035890 Solanum pennellii HOM05D000192 ORTHO05D006528 1.8e-25 119.8 152 50.0
Cpa.g.sc26.210 Carica papaya HOM05D000192 ORTHO05D006528 2.3e-25 119.4 154 55.2
CAN.G311.110 Capsicum annuum HOM05D000192 ORTHO05D006528 3.0e-25 119.0 152 50.7
Peaxi162Scf00400g00022 Petunia axillaris HOM05D000192 ORTHO05D006528 5.1e-25 118.2 149 54.4
Nn6g31750 Nelumbo nucifera HOM05D000192 ORTHO05D006528 1.5e-24 116.7 153 51.0
Migut.C00947 Erythranthe guttata HOM05D000192 ORTHO05D006528 4.3e-24 115.2 148 48.6
CANSAT25G1315 Cannabis sativa HOM05D000192 ORTHO05D006528 9.6e-24 114.0 151 48.3
THA.LOC104807040 Tarenaya hassleriana HOM05D000192 ORTHO05D006528 6.2e-23 111.3 144 47.9
Nitab4.5_0002710g0070 Nicotiana tabacum HOM05D000192 ORTHO05D006528 1.1e-22 110.5 152 49.3
Glyma.04G018800 Glycine max HOM05D000192 ORTHO05D006528 1.5e-21 106.7 156 46.8
Lj1g0016081 Lotus japonicus HOM05D000192 ORTHO05D006528 1.5e-21 106.7 124 50.0
Glyma.06G019100 Glycine max HOM05D000192 ORTHO05D006528 4.5e-21 105.1 158 44.9
PSO675G4094 Papaver somniferum HOM05D000192 ORTHO05D006528 1.0e-20 104.0 162 46.9
PGR083G2156 Punica granatum HOM05D000192 ORTHO05D006528 1.7e-20 103.2 152 46.7
arahy.Tifrunner.gnm1.ann1.D59EVQ Arachis hypogaea HOM05D000192 ORTHO05D006528 2.2e-20 102.8 132 48.5
Sp5g31380 Schrenkiella parvula HOM05D000192 ORTHO05D006528 2.9e-20 102.4 122 53.3
PSO541G6369 Papaver somniferum HOM05D000192 ORTHO05D006528 3.8e-20 102.1 162 46.9
THA.LOC104809754 Tarenaya hassleriana HOM05D000192 ORTHO05D006528 3.8e-20 102.1 122 52.5
Thhalv10019441m.g Eutrema salsugineum HOM05D000192 ORTHO05D006528 4.9e-20 101.7 123 52.0
BcaC08g47122 Brassica carinata HOM05D000192 ORTHO05D006528 6.5e-20 101.3 122 54.1
Aa31LG4G6330 Aethionema arabicum HOM05D000192 ORTHO05D006528 8.4e-20 100.9 124 53.2
BcaC08g47275 Brassica carinata HOM05D000192 ORTHO05D006528 1.1e-19 100.5 122 54.1
C06p50200 Brassica napus HOM05D000192 ORTHO05D006528 1.1e-19 100.5 122 54.1
BolC6t40060H Brassica oleracea HOM05D000192 ORTHO05D006528 1.1e-19 100.5 122 54.1
A07p41810 Brassica napus HOM05D000192 ORTHO05D006528 1.9e-19 99.8 122 54.1
Ca_15442_v3 Cicer arietinum L. HOM05D000192 ORTHO05D006528 1.9e-19 99.8 123 48.0
THA.LOC104813758 Tarenaya hassleriana HOM05D000192 ORTHO05D006528 1.9e-19 99.8 122 52.5
AL2G36320 Arabidopsis lyrata HOM05D000192 ORTHO05D006528 3.2e-19 99.0 122 52.5
AT1G76240 Arabidopsis thaliana HOM05D000192 ORTHO05D006528 5.5e-19 98.2 122 52.5
MBI08_g42655_MAGBIO Magnolia biondii HOM05D000192 ORTHO05D006528 2.7e-18 95.9 149 45.6
Cc10_g00760 Coffea canephora HOM05D000192 ORTHO05D006528 3.5e-18 95.5 124 48.4
BraA07t31711Z Brassica rapa HOM05D000192 ORTHO05D006528 4.6e-18 95.1 122 52.5
CARHR069800 Cardamine hirsuta HOM05D000192 ORTHO05D006528 7.9e-18 94.4 122 50.8
Carub.0002s2313 Capsella rubella HOM05D000192 ORTHO05D006528 1.0e-17 94.0 122 50.8
TPR.G38156 Trifolium pratense HOM05D000192 ORTHO05D006528 1.3e-17 93.6 139 46.0
CsaV3_4G037150 Cucumis sativus L. HOM05D000192 ORTHO05D006528 1.8e-17 93.2 150 44.7
GSVIVG01008683001 Vitis vinifera HOM05D000192 ORTHO05D006528 1.8e-17 93.2 84 66.7
VMungo1309G1647 Vigna mungo HOM05D000192 ORTHO05D006528 3.0e-17 92.4 124 47.6
Phvul.009G021700 Phaseolus vulgaris HOM05D000192 ORTHO05D006528 5.1e-17 91.7 127 47.2
Sed0010871 Sechium edule HOM05D000192 ORTHO05D006528 5.1e-17 91.7 145 45.5
EL10Ac1g01984 Beta vulgaris HOM05D000192 ORTHO05D006528 8.7e-17 90.9 160 45.6
Medtr3g115150 Medicago truncatula HOM05D000192 ORTHO05D006528 8.7e-17 90.9 121 48.8
MELO3C017013.2 Cucumis melo HOM05D000192 ORTHO05D006528 1.5e-16 90.1 153 43.1
SGA_v2.0_scaffold108G30845 Striga asiatica HOM05D000192 ORTHO05D006528 7.4e-16 87.8 126 49.2
ClCG11G018620 Citrullus lanatus HOM05D000192 ORTHO05D006528 1.3e-15 87.0 125 46.4
Prupe.1G355300 Prunus persica HOM05D000192 ORTHO05D006528 1.6e-15 86.7 151 41.7
Lalb_Chr03g0033641 Lupinus albus HOM05D000192 ORTHO05D006528 4.8e-15 85.1 153 40.5
HanXRQChr05g0146821 Helianthus annuus HOM05D000192 ORTHO05D006528 6.3e-15 84.7 124 47.6
Lsat_1_v5_gn_9_44960 Lactuca sativa HOM05D000192 ORTHO05D006528 1.8e-14 83.2 127 46.5
Sc15g0004480 Simmondsia chinensis HOM05D000192 ORTHO05D006528 2.4e-14 82.8 144 41.7
BcaB05g24976 Brassica carinata HOM05D000192 ORTHO05D006528 6.9e-14 81.3 123 46.3
AUR62036889 Chenopodium quinoa HOM05D000192 ORTHO05D006528 6.9e-14 81.3 162 43.8
Sed0016603 Sechium edule HOM05D000192 ORTHO05D006528 6.9e-14 81.3 122 43.4
MD08G1003400 Malus domestica HOM05D000192 ORTHO05D006528 1.5e-13 80.1 176 37.5
PSO170G2613 Papaver somniferum HOM05D000192 ORTHO05D006528 4.5e-13 78.6 125 39.2
SalBow7G2283 Salvia bowleyana HOM05D000192 ORTHO05D006528 7.7e-13 77.8 127 44.9
Sed0005663 Sechium edule HOM05D000192 ORTHO05D006528 7.7e-13 77.8 142 38.7
ECA232G4383 Erigeron canadensis HOM05D000192 ORTHO05D006528 1.7e-12 76.6 124 45.2
Migut.C00951 Erythranthe guttata HOM05D000192 ORTHO05D006528 6.5e-12 74.7 121 41.3
unitig_747.g21520 Utricularia gibba HOM05D000192 ORTHO05D006528 6.5e-12 74.7 156 35.9
Ah.11g041040 Amaranthus hybridus HOM05D000192 ORTHO05D006528 1.4e-11 73.6 163 39.3
Aqoxy6G01755 Aquilegia oxysepala HOM05D000192 ORTHO05D006528 9.4e-11 70.9 155 34.2
unitig_0.g2103 Utricularia gibba HOM05D000192 ORTHO05D006528 1.2e-10 70.5 158 35.4
Eucgr.F01753 Eucalyptus grandis HOM05D000192 ORTHO05D006528 1.6e-10 70.1 128 39.8
CsaV3_6G031640 Cucumis sativus L. HOM05D000192 ORTHO05D006528 2.1e-10 69.7 143 37.8
ClCG08G009500 Citrullus lanatus HOM05D000192 ORTHO05D006528 2.7e-10 69.3 143 37.8
ClCG08G009560 Citrullus lanatus HOM05D000192 ORTHO05D006528 2.7e-10 69.3 143 37.8
Gorai.009G188400 Gossypium raimondii HOM05D000192 ORTHO05D006528 2.3e-09 66.2 77 48.1
MELO3C026545.2 Cucumis melo HOM05D000192 ORTHO05D006528 3.9e-09 65.5 124 37.9
Psat0s2508g0040 Pisum sativum HOM05D000192 ORTHO05D000123 4.8e-07 58.5 151 31.8
TWI75G0351 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 4.8e-07 58.5 147 29.9
Ah.00g000410 Amaranthus hybridus HOM05D000192 ORTHO05D006528 6.3e-07 58.2 154 35.1
Actinidia29784 Actinidia chinensis HOM05D000192 ORTHO05D006528 8.2e-07 57.8 61 50.8
FAN23G0911 Fragaria x ananassa HOM05D000192 ORTHO05D000123 3.1e-06 55.8 151 30.5
Psat2g150800 Pisum sativum HOM05D000192 ORTHO05D000123 3.1e-06 55.8 121 32.2
Duzib187G1975 Durio zibethinus HOM05D000192 ORTHO05D000123 4.1e-06 55.5 148 31.8
MBI05_g46626_MAGBIO Magnolia biondii HOM05D000192 ORTHO05D000123 6.9e-06 54.7 120 32.5


User provided reference genes

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