Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.8e-96 355.9 184 100.0
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.6e-95 352.8 184 99.5
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 1.6e-55 219.9 189 65.1
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 9.0e-51 204.1 187 61.5
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 9.6e-45 184.1 150 66.0
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 2.1e-39 166.4 193 49.2
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 1.0e-38 164.1 274 43.4
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.9e-29 133.3 190 46.8
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 2.5e-29 132.9 189 46.6
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 1.1e-27 127.5 187 44.4
Lj8C159G11 Lonicera japonica HOM05D008538 ORTHO05D010142 3.2e-24 115.9 210 39.5
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 5.5e-24 115.2 198 41.4
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 9.4e-24 114.4 200 42.0
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 1.6e-23 113.6 198 40.9
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 3.6e-23 112.5 148 50.0
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 4.6e-23 112.1 187 43.9
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 5.1e-22 108.6 137 51.1
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 5.1e-22 108.6 189 42.3
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 2.0e-21 106.7 184 42.9
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 2.0e-21 106.7 147 45.6
Rhsim04G0018000 Rhododendron simsii HOM05D008538 ORTHO05D010142 2.8e-20 102.8 360 28.6
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 4.8e-20 102.1 139 45.3
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 8.2e-20 101.3 139 43.9
Manes.15G083500 Manihot esculenta HOM05D008538 ORTHO05D010142 6.9e-19 98.2 125 46.4
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 9.1e-19 97.8 140 45.0
Manes.03G116200 Manihot esculenta HOM05D008538 ORTHO05D010142 1.5e-18 97.1 143 42.0
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 2.6e-18 96.3 184 41.3
MELO3C016550.2 Cucumis melo HOM05D008538 ORTHO05D010142 4.5e-18 95.5 159 39.0
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 4.5e-18 95.5 149 37.6
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 7.7e-18 94.7 128 45.3
ClCG10G006550 Citrullus lanatus HOM05D008538 ORTHO05D010142 1.3e-17 94.0 144 40.3
HanXRQChr08g0234631 Helianthus annuus HOM05D008538 ORTHO05D010142 2.9e-17 92.8 184 37.0
QL93p2023_0080 Quercus lobata HOM05D008538 ORTHO05D010142 3.8e-17 92.4 146 42.5
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 4.2e-16 89.0 126 48.4
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 5.5e-16 88.6 117 48.7
Ciclev10010245m.g Citrus clementina HOM05D008538 ORTHO05D010142 7.2e-16 88.2 132 44.7
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 2.1e-15 86.7 128 43.0
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 2.1e-15 86.7 128 43.0
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 2.1e-15 86.7 139 38.8
Thecc.07G072500 Theobroma cacao HOM05D019219 ORTHO05D010142 3.6e-15 85.9 134 44.0
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 6.1e-15 85.1 128 42.2
Nitab4.5_0001320g0090 Nicotiana tabacum HOM05D008538 ORTHO05D010142 3.0e-14 82.8 189 35.4
Cpa.g.sc80.108 Carica papaya HOM05D008538 ORTHO05D010142 6.7e-14 81.6 115 43.5
SGA_v2.0_scaffold73G24313 Striga asiatica HOM05D008538 ORTHO05D010142 6.7e-14 81.6 109 48.6
CsaV3_3G006000 Cucumis sativus L. HOM05D008538 ORTHO05D010142 1.1e-13 80.9 156 37.2
Glyma.06G253800 Glycine max HOM05D011644 ORTHO05D010142 7.4e-13 78.2 133 42.1
Phvul.011G154700 Phaseolus vulgaris HOM05D011644 ORTHO05D010142 1.7e-12 77.0 136 42.6
TPR.G33280 Trifolium pratense HOM05D011644 ORTHO05D010142 2.8e-12 76.3 135 42.2
Lalb_Chr19g0134471 Lupinus albus HOM05D011644 ORTHO05D010142 6.3e-12 75.1 133 42.9
Glyma.12G147600 Glycine max HOM05D011644 ORTHO05D010142 5.3e-11 72.0 135 40.0
Oeu008026.2 Olea europaea HOM05D008538 ORTHO05D010142 7.0e-11 71.6 148 39.2
Eucgr.D01016 Eucalyptus grandis HOM05D008538 ORTHO05D010142 2.6e-10 69.7 139 36.0
VMungo1127G1310 Vigna mungo HOM05D011644 ORTHO05D010142 3.5e-10 69.3 141 39.7
Medtr8g469260 Medicago truncatula HOM05D011644 ORTHO05D010142 8.5e-09 64.7 134 38.8
Lj3g0010461 Lotus japonicus HOM05D011644 ORTHO05D010142 1.1e-08 64.3 135 40.7
Migut.M00874 Erythranthe guttata HOM05D008538 ORTHO05D010142 2.5e-08 63.2 116 39.7
Lsat_1_v5_gn_3_61981 Lactuca sativa HOM05D008538 ORTHO05D010142 4.2e-08 62.4 85 44.7
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 5.5e-08 62.0 92 46.7
Psat4g132160 Pisum sativum HOM05D011644 ORTHO05D010142 1.2e-07 60.8 132 34.1
Ciclev10010289m.g Citrus clementina HOM05D019219 ORTHO05D010142 2.1e-07 60.1 71 50.7
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.1e-07 60.1 93 37.6
Hund28861 Selenicereus undatus HOM05D024071 ORTHO05D023383 2.1e-07 60.1 125 39.2
Hund28864 Selenicereus undatus HOM05D024071 ORTHO05D023383 2.1e-07 60.1 125 39.2
QL08p018608 Quercus lobata HOM05D008538 ORTHO05D010142 3.6e-07 59.3 65 46.2
EL10Ac4g08077 Beta vulgaris HOM05D024071 ORTHO05D023383 4.7e-07 58.9 127 35.4
Gohir.A11G283900 Gossypium hirsutum HOM05D019219 ORTHO05D010142 4.7e-07 58.9 135 37.0
Duzib268G1845 Durio zibethinus HOM05D019219 ORTHO05D010142 2.3e-06 56.6 129 38.8
Ah.04g164970 Amaranthus hybridus HOM05D024071 ORTHO05D023383 6.7e-06 55.1 134 34.3


User provided reference genes

Program Settings