Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 5.2e-192 674.1 315 100.0
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 2.3e-179 632.1 322 93.2
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 3.9e-179 631.3 322 92.9
CSS0041687 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.9e-109 399.8 315 64.4
Rhsim04G0202700 Rhododendron simsii HOM05D025536 ORTHO05D010877 9.3e-48 194.9 304 38.8
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 2.8e-28 130.2 309 34.6
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.5e-26 122.9 245 36.3
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.7e-25 120.9 287 35.5
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.5e-24 115.9 249 34.1
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 1.8e-22 110.9 208 36.5
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 8.2e-20 102.1 197 33.5
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.8e-19 100.9 254 31.1
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.6e-18 97.8 280 26.8
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.6e-18 97.8 201 33.3
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 7.7e-18 95.5 302 27.2
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.2e-17 94.0 201 32.8
Duzib264G0155 Durio zibethinus HOM05D029922 ORTHO05D035097 6.5e-17 92.4 199 29.1
Duzib264G0667 Durio zibethinus HOM05D029922 ORTHO05D035097 6.5e-17 92.4 199 29.1
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 9.4e-16 88.6 202 29.7
Duzib264G0671 Durio zibethinus HOM05D029922 ORTHO05D035097 1.6e-15 87.8 199 28.1
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 3.6e-15 86.7 236 29.2
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 8.0e-15 85.5 237 30.0
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 1.0e-14 85.1 295 25.8
Rhsim04G0208100 Rhododendron simsii HOM05D013111 ORTHO05D013046 1.0e-14 85.1 267 26.2
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.4e-14 84.7 212 30.2
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.3e-14 84.0 201 29.9
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 3.0e-14 83.6 258 27.9
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 5.2e-14 82.8 299 24.7
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 2.0e-13 80.9 236 25.8
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.3e-13 80.1 238 27.7
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.3e-13 80.1 190 31.1
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.4e-13 79.7 190 31.1
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.4e-13 79.7 190 31.1
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.4e-13 79.7 190 31.1
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 7.5e-13 79.0 258 25.6
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 7.5e-13 79.0 233 28.3
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.7e-13 78.6 190 31.1
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 4.8e-12 76.3 205 26.8
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.8e-12 76.3 201 28.9
CSS0015882 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 6.3e-12 75.9 244 27.0
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 6.3e-12 75.9 275 27.6
DCAR_018731 Daucus carota HOM05D029922 ORTHO05D013046 1.1e-11 75.1 266 25.2
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.4e-11 73.9 198 27.8
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 2.4e-11 73.9 270 28.5
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 2.4e-11 73.9 270 28.5
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 2.4e-11 73.9 299 24.1
Gohir.D06G025700 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.1e-11 73.6 240 27.5
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.1e-11 73.2 248 26.6
Gohir.D06G026000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.0e-11 72.4 246 28.0
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 9.1e-11 72.0 280 27.9
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 1.2e-10 71.6 236 29.7
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 2.0e-10 70.9 275 27.3
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.7e-10 70.5 203 26.6
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.7e-10 70.5 269 29.7
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.5e-10 70.1 285 28.8
Gohir.A06G029200 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.7e-10 68.9 236 28.8
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.0e-09 68.6 240 28.3
Gohir.D06G028300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.2e-09 67.4 209 29.7
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 3.8e-09 66.6 190 29.5
Dinv35655 Davidia involucrata HOM05D013363 ORTHO05D015094 5.0e-09 66.2 246 26.0
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.0e-09 66.2 200 26.0
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 5.0e-09 66.2 111 35.1
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.5e-09 65.9 243 30.9
COL.COLO4_09953 Corchorus olitorius HOM05D017380 ORTHO05D019049 8.5e-09 65.5 192 27.6
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 8.5e-09 65.5 244 26.6
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 8.5e-09 65.5 303 26.4
RhsimUnG0035000 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.5e-09 65.5 199 28.6
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 2.5e-08 63.9 265 25.3
Dinv35657 Davidia involucrata HOM05D013363 ORTHO05D015094 2.5e-08 63.9 247 25.5
DCAR_024801 Daucus carota HOM05D062669 ORTHO05D045068 5.5e-08 62.8 233 26.2
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 2.7e-07 60.5 223 29.1
TWI74G1430 Tripterygium wilfordii HOM05D000249 ORTHO05D000206 2.7e-07 60.5 161 30.4
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 1.0e-06 58.5 210 28.6
COL.COLO4_30776 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.8e-06 57.8 144 29.9
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 2.3e-06 57.4 88 39.8
QL11p055703 Quercus lobata HOM05D033527 ORTHO05D009743 2.3e-06 57.4 101 33.7
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 3.0e-06 57.0 136 31.6
AUR62016279 Chenopodium quinoa HOM05D000249 ORTHO05D000206 4.0e-06 56.6 110 33.6
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 4.0e-06 56.6 96 34.4
EL10Ac6g13766 Beta vulgaris HOM05D000034 ORTHO05D000037 5.2e-06 56.2 209 26.3
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 6.8e-06 55.8 109 33.9
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 8.8e-06 55.5 121 32.2


User provided reference genes

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