Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046098 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.5e-53 211.8 106 100.0
CSS0001645 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-16 89.7 42 100.0
CSS0033012 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-16 89.7 42 100.0
CSS0035965 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-16 89.7 42 100.0
CSS0038804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-16 89.7 42 100.0
CSS0046574 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-16 89.7 42 100.0
CSS0046830 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-16 89.7 42 100.0
CSS0004538 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-09 66.2 45 66.7
Rhsim10G0138200 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.9e-09 64.7 40 72.5
CSS0004099 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-09 64.3 43 67.4
CSS0014085 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-09 64.3 43 67.4
CSS0021122 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-09 64.3 43 67.4
CSS0027022 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-09 64.3 43 67.4
CSS0040453 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-09 64.3 43 67.4
CSS0042290 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-09 64.3 43 67.4
Dinv10684 Davidia involucrata HOM05D000023 ORTHO05D000014 4.1e-08 61.6 39 69.2
Gorai.011G116500 Gossypium raimondii HOM05D000023 ORTHO05D000014 7.1e-08 60.8 43 62.8
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 9.2e-08 60.5 43 65.1
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-07 60.1 43 65.1
CSS0022109 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-07 59.7 44 65.9
CSS0034414 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-07 59.7 44 65.9
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.6e-07 59.7 37 70.3
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.6e-07 59.7 37 70.3
FAN17G2570 Fragaria x ananassa HOM05D017367 ORTHO05D000014 4.6e-07 58.2 40 70.0
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 1.0e-06 57.0 41 63.4
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 1.0e-06 57.0 38 63.2
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 1.0e-06 57.0 41 61.0
RcHm_v2.0_Chr4g0434271 Rosa chinensis HOM05D000023 ORTHO05D000014 1.0e-06 57.0 42 61.9
RcHm_v2.0_Chr4g0442721 Rosa chinensis HOM05D000023 ORTHO05D000014 1.0e-06 57.0 42 61.9
RcHm_v2.0_Chr7g0205371 Rosa chinensis HOM05D000023 ORTHO05D000014 1.0e-06 57.0 42 61.9
Lj2g0000793 Lotus japonicus HOM05D000023 ORTHO05D000014 1.3e-06 56.6 41 63.4
RcHm_v2.0_Chr4g0420941 Rosa chinensis HOM05D000023 ORTHO05D000014 1.3e-06 56.6 46 58.7
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 1.7e-06 56.2 46 58.7
TWI81G1053 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.7e-06 56.2 44 54.5
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 2.3e-06 55.8 40 60.0
Medtr7g076703 Medicago truncatula HOM05D000023 ORTHO05D000014 3.0e-06 55.5 38 63.2
TWI39G0680 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.9e-06 55.1 43 60.5
FvH4_5g08811 Fragaria vesca HOM05D000023 ORTHO05D000014 6.6e-06 54.3 37 70.3
Atru.chr11.1499 Acer truncatum HOM05D000023 ORTHO05D000014 8.6e-06 53.9 37 64.9
TWI74G0427 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.6e-06 53.9 47 53.2


User provided reference genes

Program Settings