Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046083 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.5e-104 382.9 193 100.0
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 8.6e-28 127.9 139 58.3
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 1.9e-27 126.7 149 56.4
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 5.6e-27 125.2 152 55.3
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 7.8e-21 104.8 150 48.7
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 1.3e-20 104.0 153 51.0
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 5.0e-20 102.1 146 49.3
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.0e-17 92.4 138 54.3
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.0e-17 92.4 138 54.3
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 8.9e-17 91.3 143 45.5
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 2.9e-15 86.3 138 47.1
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 2.9e-15 86.3 138 46.4
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 8.3e-15 84.7 141 42.6
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 4.1e-14 82.4 143 45.5
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 7.1e-14 81.6 143 46.9
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 4.6e-13 79.0 181 38.1
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 8.6e-12 74.7 150 41.3
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.9e-11 73.6 143 39.2
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 2.5e-11 73.2 143 44.8
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 2.5e-11 73.2 135 43.0
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.5e-11 73.2 136 40.4
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 3.3e-11 72.8 143 44.8
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 3.3e-11 72.8 181 36.5
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 5.6e-11 72.0 139 42.4
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 5.6e-11 72.0 149 40.3
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 7.3e-11 71.6 150 38.0
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 9.5e-11 71.2 132 41.7
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 9.5e-11 71.2 200 34.5
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 1.2e-10 70.9 136 43.4
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.6e-10 70.5 146 43.2
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.6e-10 70.5 147 43.5
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.1e-10 70.1 147 43.5
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.8e-10 69.7 148 41.2
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.8e-10 69.7 148 41.2
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.8e-10 69.7 135 44.4
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 2.8e-10 69.7 144 41.7
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 4.7e-10 68.9 147 41.5
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 6.2e-10 68.6 144 36.1
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 1.4e-09 67.4 129 39.5
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 1.4e-09 67.4 143 38.5
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 1.8e-09 67.0 142 41.5
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 1.8e-09 67.0 149 38.9
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.3e-09 66.6 149 38.3
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 2.3e-09 66.6 189 34.4
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 2.3e-09 66.6 135 39.3
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.0e-09 65.9 148 43.2
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 4.0e-09 65.9 143 42.7
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 5.2e-09 65.5 141 38.3
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 5.2e-09 65.5 140 40.0
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 6.8e-09 65.1 148 39.9
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 8.9e-09 64.7 129 38.8
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 1.5e-08 63.9 143 37.1
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 1.5e-08 63.9 147 38.8
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.0e-08 63.5 140 41.4
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 2.6e-08 63.2 136 42.6
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 3.4e-08 62.8 140 41.4
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 3.4e-08 62.8 131 38.2
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 4.4e-08 62.4 204 32.4
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 4.4e-08 62.4 131 41.2
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 4.4e-08 62.4 136 39.7
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 5.8e-08 62.0 147 38.8
TAR624G1003 Trochodendron aralioides HOM05D003782 ORTHO05D004361 5.8e-08 62.0 111 45.9
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 7.6e-08 61.6 136 39.7
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 9.9e-08 61.2 138 42.0
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.7e-07 60.5 144 38.9
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.7e-07 60.5 92 45.7
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.9e-07 59.7 143 38.5
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 4.9e-07 58.9 141 34.8
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 4.9e-07 58.9 141 36.9
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 6.4e-07 58.5 153 39.2
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 8.4e-07 58.2 148 39.9
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.1e-06 57.8 143 37.8
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 1.1e-06 57.8 131 38.9
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.4e-06 57.4 146 36.3
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 2.4e-06 56.6 123 40.7
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 3.2e-06 56.2 149 36.2
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 4.1e-06 55.8 103 44.7
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 5.4e-06 55.5 142 35.9


User provided reference genes

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