Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046069 Camellia sinensis var. sinensis HOM05D000370 ORTHO05D007301 1.2e-74 283.1 143 100.0
Actinidia31517 Actinidia chinensis HOM05D000370 ORTHO05D007301 1.1e-48 196.8 137 72.3
CSS0022932 Camellia sinensis var. sinensis HOM05D000370 ORTHO05D007301 1.7e-44 183.0 137 70.1
CSS0011027 Camellia sinensis var. sinensis HOM05D000370 ORTHO05D007301 6.3e-44 181.0 137 69.3
Rhsim07G0109900 Rhododendron simsii HOM05D000370 ORTHO05D007301 1.1e-43 180.3 137 68.6
GSVIVG01004717001 Vitis vinifera HOM05D000370 ORTHO05D007301 1.6e-42 176.4 120 77.5
TAR375G0433 Trochodendron aralioides HOM05D000370 ORTHO05D007301 2.3e-41 172.6 117 76.9
Lj2A219T46 Lonicera japonica HOM05D000370 ORTHO05D007301 8.6e-41 170.6 120 77.5
vmacro14076 Vaccinium macrocarpon HOM05D000370 ORTHO05D007301 1.2e-39 166.8 137 66.4
Nitab4.5_0001381g0140 Nicotiana tabacum HOM05D000370 ORTHO05D007301 1.6e-39 166.4 126 71.4
CAN.G1058.42 Capsicum annuum HOM05D000370 ORTHO05D007301 6.1e-39 164.5 122 72.1
Nitab4.5_0002289g0030 Nicotiana tabacum HOM05D000370 ORTHO05D007301 6.1e-39 164.5 126 71.4
Sopen08g027000 Solanum pennellii HOM05D000370 ORTHO05D007301 3.0e-38 162.2 122 72.1
PGSC0003DMG400004820 Solanum tuberosum HOM05D000370 ORTHO05D007301 3.0e-38 162.2 122 72.1
Solyc08g078520.4 Solanum lycopersicum HOM05D000370 ORTHO05D007301 8.9e-38 160.6 122 71.3
Cc08_g12300 Coffea canephora HOM05D000370 ORTHO05D007301 2.0e-37 159.5 120 74.2
Peaxi162Scf00209g00020 Petunia axillaris HOM05D000370 ORTHO05D007301 7.5e-37 157.5 122 72.1
Thecc.03G249700 Theobroma cacao HOM05D000370 ORTHO05D007301 1.3e-36 156.8 137 62.0
Nn6g33921 Nelumbo nucifera HOM05D000370 ORTHO05D007301 1.1e-35 153.7 118 69.5
Oeu024048.1 Olea europaea HOM05D000370 ORTHO05D007301 1.4e-35 153.3 124 66.9
Duzib205G0882 Durio zibethinus HOM05D000370 ORTHO05D007301 2.4e-35 152.5 123 66.7
Atru.chr9.1294 Acer truncatum HOM05D000370 ORTHO05D007301 5.4e-35 151.4 123 67.5
ECA233G3748 Erigeron canadensis HOM05D003744 ORTHO05D004327 5.4e-35 151.4 120 70.0
Manes.01G081500 Manihot esculenta HOM05D000370 ORTHO05D007301 1.2e-34 150.2 118 69.5
Gorai.008G234400 Gossypium raimondii HOM05D000370 ORTHO05D007301 1.6e-34 149.8 137 60.6
CiPaw.12G051500 Carya illinoinensis HOM05D003141 ORTHO05D003633 2.0e-34 149.4 140 60.0
Haze_07901 Corylus avellana HOM05D000370 ORTHO05D007301 2.0e-34 149.4 138 60.9
Gohir.D12G218800 Gossypium hirsutum HOM05D000370 ORTHO05D007301 2.0e-34 149.4 137 59.9
Prupe.5G067800 Prunus persica HOM05D000370 ORTHO05D007301 2.7e-34 149.1 139 58.3
Duzib068G1150 Durio zibethinus HOM05D000370 ORTHO05D007301 3.5e-34 148.7 137 59.1
Sc01g0008390 Simmondsia chinensis HOM05D000370 ORTHO05D007301 4.5e-34 148.3 123 65.9
arahy.Tifrunner.gnm1.ann1.LB9ANX Arachis hypogaea HOM05D000370 ORTHO05D007301 5.9e-34 147.9 137 60.6
Cfa012733 Carpinus fangiana HOM05D000370 ORTHO05D007301 5.9e-34 147.9 124 66.9
Gohir.A12G216200 Gossypium hirsutum HOM05D000370 ORTHO05D007301 5.9e-34 147.9 137 59.1
arahy.Tifrunner.gnm1.ann1.CEL5PM Arachis hypogaea HOM05D000370 ORTHO05D007301 7.8e-34 147.5 137 60.6
Gohir.D08G187800 Gossypium hirsutum HOM05D000370 ORTHO05D007301 1.0e-33 147.1 116 69.8
Gorai.004G197700 Gossypium raimondii HOM05D000370 ORTHO05D007301 1.0e-33 147.1 116 69.8
Gohir.A08G169500 Gossypium hirsutum HOM05D000370 ORTHO05D007301 1.3e-33 146.7 116 69.8
VMungo0251G2833 Vigna mungo HOM05D000370 ORTHO05D007301 2.9e-33 145.6 137 56.9
Psat2g177080 Pisum sativum HOM05D000370 ORTHO05D007301 6.6e-33 144.4 117 67.5
Aqoxy7G00791 Aquilegia oxysepala HOM05D000370 ORTHO05D007301 8.6e-33 144.1 115 69.6
FvH4_5g19100 Fragaria vesca HOM05D000370 ORTHO05D007301 8.6e-33 144.1 122 64.8
FAN18G4132 Fragaria x ananassa HOM05D000370 ORTHO05D007301 8.6e-33 144.1 122 64.8
GSVIVG01001955001 Vitis vinifera HOM05D000370 ORTHO05D007301 8.6e-33 144.1 91 80.2
Nn1g00963 Nelumbo nucifera HOM05D000370 ORTHO05D007301 1.1e-32 143.7 118 65.3
RcHm_v2.0_Chr7g0203571 Rosa chinensis HOM05D000370 ORTHO05D007301 1.1e-32 143.7 128 62.5
FAN08G3393 Fragaria x ananassa HOM05D000370 ORTHO05D007301 1.9e-32 142.9 122 64.8
Ciclev10019315m.g Citrus clementina HOM05D000370 ORTHO05D007301 2.5e-32 142.5 117 67.5
Phvul.002G057600 Phaseolus vulgaris HOM05D000370 ORTHO05D007301 1.2e-31 140.2 120 64.2
QL12p011752 Quercus lobata HOM05D000370 ORTHO05D007301 1.2e-31 140.2 137 59.1
FAN13G2645 Fragaria x ananassa HOM05D000370 ORTHO05D007301 1.6e-31 139.8 119 65.5
DCAR_008497 Daucus carota HOM05D000370 ORTHO05D007301 2.1e-31 139.4 123 62.6
HanXRQChr16g0506201 Helianthus annuus HOM05D000370 ORTHO05D007301 4.7e-31 138.3 122 65.6
VMungo1215G1285 Vigna mungo HOM05D000370 ORTHO05D007301 4.7e-31 138.3 89 76.4
Lj2g0024916 Lotus japonicus HOM05D000370 ORTHO05D007301 6.1e-31 137.9 117 63.2
Potri.001G157200 Populus trichocarpa HOM05D000370 ORTHO05D007301 8.0e-31 137.5 90 77.8
TPR.G18145 Trifolium pratense HOM05D000370 ORTHO05D007301 1.0e-30 137.1 117 65.0
Phvul.003G221500 Phaseolus vulgaris HOM05D000370 ORTHO05D007301 1.4e-30 136.7 137 54.7
Medtr5g012790 Medicago truncatula HOM05D000370 ORTHO05D007301 2.3e-30 136.0 117 64.1
Ca_24584_v3 Cicer arietinum L. HOM05D000370 ORTHO05D007301 3.0e-30 135.6 117 63.2
Glyma.05G060400 Glycine max HOM05D000370 ORTHO05D007301 4.0e-30 135.2 123 61.8
TWI81G0014 Tripterygium wilfordii HOM05D000370 ORTHO05D007301 5.2e-30 134.8 119 64.7
Hund14554 Selenicereus undatus HOM05D000370 ORTHO05D007301 6.8e-30 134.4 120 63.3
Manes.02G040700 Manihot esculenta HOM05D000370 ORTHO05D007301 8.9e-30 134.0 122 60.7
Glyma.17G142700 Glycine max HOM05D000370 ORTHO05D007301 1.2e-29 133.7 137 54.0
CANSAT21G1556 Cannabis sativa HOM05D000370 ORTHO05D007301 2.0e-29 132.9 123 62.6
Glyma.11G033900 Glycine max HOM05D000370 ORTHO05D007301 2.0e-29 132.9 120 62.5
EL10Ac5g12385 Beta vulgaris HOM05D000370 ORTHO05D007301 2.6e-29 132.5 120 62.5
Sabra01G0134200 Salix brachista HOM05D000370 ORTHO05D007301 4.4e-29 131.7 137 56.2
PGR042G1217 Punica granatum HOM05D000370 ORTHO05D007301 5.8e-29 131.3 121 60.3
MD06G1057000 Malus domestica HOM05D000370 ORTHO05D007301 1.3e-28 130.2 122 62.3
Eucgr.E00412 Eucalyptus grandis HOM05D000370 ORTHO05D007301 1.7e-28 129.8 122 57.4
Glyma.01G208300 Glycine max HOM05D000370 ORTHO05D007301 1.7e-28 129.8 120 60.0
CsaV3_5G004270 Cucumis sativus L. HOM05D000370 ORTHO05D007301 2.9e-28 129.0 126 60.3
Lalb_Chr09g0324341 Lupinus albus HOM05D000370 ORTHO05D007301 3.7e-28 128.6 123 61.0
ClCG00G002030 Citrullus lanatus HOM05D000370 ORTHO05D007301 4.9e-28 128.3 126 59.5
ClCG01G004100 Citrullus lanatus HOM05D000370 ORTHO05D007301 4.9e-28 128.3 126 59.5
ATR0317G128 Amborella trichopoda HOM05D000370 ORTHO05D007301 6.4e-28 127.9 123 56.1
MELO3C005527.2 Cucumis melo HOM05D000370 ORTHO05D007301 8.3e-28 127.5 126 59.5
THA.LOC104798362 Tarenaya hassleriana HOM05D000370 ORTHO05D007301 4.1e-27 125.2 90 72.2
Sed0023673 Sechium edule HOM05D000370 ORTHO05D007301 5.4e-27 124.8 90 74.4
Zm00001eb023250 Zea mays HOM05D000370 ORTHO05D007301 1.7e-25 119.8 107 58.9
Os10g0559800 Oryza sativa ssp. japonica HOM05D000370 ORTHO05D007301 3.9e-25 118.6 107 57.9
Ah.12g054280 Amaranthus hybridus HOM05D000370 ORTHO05D007301 1.1e-24 117.1 113 58.4
AUR62019957 Chenopodium quinoa HOM05D000370 ORTHO05D007301 2.5e-24 115.9 129 52.7
PSO339G4445 Papaver somniferum HOM05D000370 ORTHO05D007301 1.2e-23 113.6 121 57.9
AUR62007093 Chenopodium quinoa HOM05D000370 ORTHO05D007301 3.6e-23 112.1 129 52.7
Lsat_1_v5_gn_6_17960 Lactuca sativa HOM05D000370 ORTHO05D007301 6.2e-23 111.3 129 58.1
Sp2g12100 Schrenkiella parvula HOM05D000370 ORTHO05D007301 6.2e-23 111.3 107 59.8
HPP92_022472 Vanilla planifolia HOM05D000370 ORTHO05D007301 1.4e-22 110.2 112 57.1
Aa31csc39G50 Aethionema arabicum HOM05D000370 ORTHO05D007301 1.8e-22 109.8 107 57.9
AL8G10660 Arabidopsis lyrata HOM05D000370 ORTHO05D007301 1.8e-22 109.8 90 65.6
Dinv39156 Davidia involucrata HOM05D000370 ORTHO05D007301 4.0e-22 108.6 59 91.5
Thhalv10000820m.g Eutrema salsugineum HOM05D000370 ORTHO05D007301 4.0e-22 108.6 110 56.4
Carub.0008s0040 Capsella rubella HOM05D000370 ORTHO05D007301 6.8e-22 107.8 120 53.3
CARHR174000 Cardamine hirsuta HOM05D000370 ORTHO05D007301 1.5e-21 106.7 85 68.2
BolC9t55835H Brassica oleracea HOM05D000370 ORTHO05D007301 7.5e-21 104.4 89 61.8
BraA09t37905Z Brassica rapa HOM05D000370 ORTHO05D007301 7.5e-21 104.4 89 61.8
BcaC04g21629 Brassica carinata HOM05D000370 ORTHO05D007301 9.8e-21 104.0 89 61.8
A09p23010 Brassica napus HOM05D000370 ORTHO05D007301 9.8e-21 104.0 90 61.1
C09p29720 Brassica napus HOM05D000370 ORTHO05D007301 6.4e-20 101.3 89 60.7
BcaB07g30776 Brassica carinata HOM05D000370 ORTHO05D007301 8.3e-20 100.9 107 55.1
AT5G47380 Arabidopsis thaliana HOM05D000370 ORTHO05D007301 1.4e-19 100.1 90 61.1
Prupe.5G061100 Prunus persica HOM05D000370 ORTHO05D007301 3.5e-18 95.5 73 68.5
FAN04G0029 Fragaria x ananassa HOM05D000370 ORTHO05D007301 3.3e-16 89.0 95 51.6
SEGI_24322 Sequoiadendron giganteum HOM05D000370 ORTHO05D007301 1.8e-14 83.2 106 47.2
Actinidia10836 Actinidia chinensis HOM05D000370 ORTHO05D007301 6.4e-12 74.7 47 83.0
HPP92_027284 Vanilla planifolia HOM05D000370 ORTHO05D007301 7.3e-08 61.2 48 70.8


User provided reference genes

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