Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 1.2e-106 389.8 191 100.0
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 2.7e-66 255.8 191 70.2
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 4.3e-64 248.4 188 68.6
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 6.2e-63 244.6 190 66.8
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 3.1e-54 215.7 196 59.7
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 2.5e-48 196.1 185 55.1
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 1.4e-46 190.3 189 55.0
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 1.1e-43 180.6 215 51.2
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.1e-43 180.6 191 54.5
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 1.9e-43 179.9 162 56.2
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 2.3e-41 172.9 188 54.3
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 3.0e-41 172.6 192 52.1
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 6.7e-41 171.4 221 51.6
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 5.7e-40 168.3 189 53.4
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 5.7e-40 168.3 200 55.0
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 9.7e-40 167.5 198 51.0
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 1.6e-39 166.8 190 53.2
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 2.2e-39 166.4 190 53.2
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 4.8e-39 165.2 188 51.6
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 6.3e-39 164.9 189 52.4
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 1.4e-38 163.7 203 50.2
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 4.5e-37 158.7 200 50.0
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 4.5e-37 158.7 200 50.5
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 2.9e-36 156.0 190 49.5
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 5.0e-36 155.2 202 47.5
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 1.1e-35 154.1 241 41.1
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 4.2e-35 152.1 194 50.0
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 9.4e-35 151.0 198 49.5
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 8.8e-33 144.4 189 47.6
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 8.8e-33 144.4 187 46.5
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 1.4e-30 137.1 207 42.0
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 5.0e-28 128.6 194 41.8
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.1e-27 127.5 191 42.9
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.1e-27 127.5 193 46.1
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 1.9e-27 126.7 209 43.1
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 4.2e-27 125.6 196 42.9
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 2.1e-26 123.2 191 43.5
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 2.7e-26 122.9 193 41.5
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.3e-25 119.8 193 40.4
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 5.2e-25 118.6 218 38.5
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 5.7e-24 115.2 192 38.5
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 3.7e-23 112.5 191 40.8
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 1.4e-22 110.5 191 40.3
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 7.0e-22 108.2 192 40.6
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 7.0e-22 108.2 195 37.4
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 1.6e-21 107.1 187 40.1
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 2.0e-21 106.7 202 37.1
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 2.0e-21 106.7 192 40.6
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 2.0e-21 106.7 192 40.6
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 4.5e-21 105.5 192 40.1
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 5.9e-21 105.1 195 36.9
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 1.7e-20 103.6 192 39.6
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 2.2e-20 103.2 195 39.5
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 3.8e-20 102.4 198 36.9
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 3.8e-20 102.4 176 40.9
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 5.0e-20 102.1 191 39.3
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.1e-19 100.9 202 38.1
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 5.5e-19 98.6 199 36.7
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 1.2e-18 97.4 186 37.6
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 2.1e-18 96.7 188 36.2
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 4.0e-17 92.4 86 57.0
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 2.6e-16 89.7 205 33.7
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 1.7e-15 87.0 194 38.1
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 1.7e-15 87.0 194 38.1
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 2.2e-15 86.7 194 36.1
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 1.3e-12 77.4 130 43.1
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 2.9e-12 76.3 184 35.9
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 3.8e-12 75.9 184 35.9
Aqoxy1G02236 Aquilegia oxysepala HOM05D007739 ORTHO05D009838 1.1e-11 74.3 225 28.9
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 5.5e-11 72.0 112 42.0
Nn7g36303 Nelumbo nucifera HOM05D007739 ORTHO05D009838 4.0e-09 65.9 60 61.7
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 4.4e-08 62.4 139 39.6
Eucgr.J00706 Eucalyptus grandis HOM05D007739 ORTHO05D009838 1.3e-07 60.8 64 56.2
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.3e-07 60.8 237 31.2
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 1.7e-07 60.5 162 37.0
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.8e-06 57.0 188 29.3
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 5.4e-06 55.5 237 31.6
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 7.0e-06 55.1 169 34.3
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 9.1e-06 54.7 182 28.6


User provided reference genes

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