Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045987 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 3.4e-49 198.7 168 100.0
CSS0014103 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 1.2e-22 110.5 181 69.1
CSS0003420 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 2.1e-22 109.8 177 64.4
CSS0030609 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 3.4e-20 102.4 180 70.0
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 1.6e-17 93.6 168 70.8
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 4.0e-13 79.0 184 62.0
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 2.7e-09 66.2 176 61.9
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 1.7e-08 63.5 188 59.0
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 8.6e-08 61.2 177 53.7
Actinidia20018 Actinidia chinensis HOM05D020756 ORTHO05D010072 1.1e-07 60.8 177 50.3
Prupe.2G106300 Prunus persica HOM05D008698 ORTHO05D010072 1.2e-06 57.4 196 54.6
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 2.1e-06 56.6 187 50.8
Nn1g09349 Nelumbo nucifera HOM05D016621 ORTHO05D010071 2.8e-06 56.2 74 52.7
FAN10G1967 Fragaria x ananassa HOM05D013051 ORTHO05D010071 4.7e-06 55.5 80 47.5
FAN01G2724 Fragaria x ananassa HOM05D013051 ORTHO05D010071 6.2e-06 55.1 80 47.5


User provided reference genes

Program Settings