Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045986 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.8e-63 245.7 122 100.0
CSS0041344 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.8e-59 230.3 133 88.7
CSS0030313 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.1e-43 179.1 136 71.3
CSS0031222 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.6e-42 173.7 129 71.3
CSS0002329 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.3e-41 170.6 136 69.1
CSS0025317 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.4e-39 166.4 129 68.2
CSS0026685 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.4e-39 166.4 129 68.2
ECA147G0003 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.3e-10 69.3 132 33.3
ECA233G1281 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.7e-10 67.4 132 34.8
ECA247G0118 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.7e-10 67.4 130 33.1
Sabra01G0113900 Salix brachista HOM05D000047 ORTHO05D000044 8.7e-10 67.4 132 34.8
CANSAT56G2663 Cannabis sativa HOM05D000047 ORTHO05D000044 1.1e-09 67.0 132 32.6
CANSAT01G1719 Cannabis sativa HOM05D000047 ORTHO05D000044 1.5e-09 66.6 132 31.8
ECA234G1365 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.9e-09 66.2 132 34.8
ECA246G5048 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.5e-09 65.9 129 33.3
ECA248G0284 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.5e-09 65.9 132 34.1
TWI39G1040 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.5e-09 65.9 125 34.4
TWI53G1469 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.5e-09 65.9 133 33.8
TWI60G0143 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.5e-09 65.9 125 34.4
TWI60G0654 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.5e-09 65.9 125 34.4
TWI81G0361 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.5e-09 65.9 133 33.8
CANSAT35G1956 Cannabis sativa HOM05D000047 ORTHO05D000044 3.3e-09 65.5 132 31.8
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.3e-09 65.5 133 33.8
ECA233G0029 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.3e-09 65.1 129 34.9
ECA233G0259 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.3e-09 65.1 130 32.3
TWI34G1932 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-09 65.1 125 34.4
TWI59G1343 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-09 65.1 125 34.4
TWI60G1316 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-09 65.1 125 34.4
Ca_12988_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 5.6e-09 64.7 134 34.3
ECA238G1277 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.6e-09 64.7 132 33.3
TWI23G1111 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.6e-09 64.7 125 33.6
ECA248G1319 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.4e-09 64.3 132 34.8
ECA248G0975 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.6e-09 63.9 132 34.1
ECA248G2827 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.6e-09 63.9 132 33.3
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 9.6e-09 63.9 133 33.1
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 9.6e-09 63.9 133 33.1
ECA238G1282 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.3e-08 63.5 132 34.1
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 1.3e-08 63.5 133 30.8
PSO339G6205 Papaver somniferum HOM05D000047 ORTHO05D000044 1.3e-08 63.5 136 30.9
CANSAT21G0440 Cannabis sativa HOM05D000047 ORTHO05D000044 2.1e-08 62.8 132 31.1
ECA236G5066 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.8e-08 62.4 132 33.3
Oeu006570.1 Olea europaea HOM05D000047 ORTHO05D000044 2.8e-08 62.4 131 35.1
Oeu056633.1 Olea europaea HOM05D000047 ORTHO05D000044 2.8e-08 62.4 131 35.1
PGR031G2178 Punica granatum HOM05D000047 ORTHO05D000044 2.8e-08 62.4 132 34.1
PGR102G0046 Punica granatum HOM05D000047 ORTHO05D000044 2.8e-08 62.4 137 31.4
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 2.8e-08 62.4 133 32.3
RcHm_v2.0_Chr5g0038141 Rosa chinensis HOM05D000047 ORTHO05D000044 2.8e-08 62.4 127 33.9
ECA240G2165 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.7e-08 62.0 129 34.1
RcHm_v2.0_Chr3g0462151 Rosa chinensis HOM05D000047 ORTHO05D000044 3.7e-08 62.0 129 35.7
TWI15G0028 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.7e-08 62.0 125 32.8
TWI15G0057 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.7e-08 62.0 121 33.9
CANSAT25G3822 Cannabis sativa HOM05D000047 ORTHO05D000044 4.8e-08 61.6 134 33.6
ECA234G4139 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.8e-08 61.6 132 34.1
Oeu046199.1 Olea europaea HOM05D000047 ORTHO05D000044 4.8e-08 61.6 131 32.1
Oeu056833.1 Olea europaea HOM05D000047 ORTHO05D000044 4.8e-08 61.6 131 31.3
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 4.8e-08 61.6 133 31.6
CANSAT54G0884 Cannabis sativa HOM05D000047 ORTHO05D000044 6.2e-08 61.2 132 31.1
QL08p015689 Quercus lobata HOM05D000047 ORTHO05D000044 6.2e-08 61.2 129 32.6
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-08 61.2 127 35.4
PGR004G1653 Punica granatum HOM05D000047 ORTHO05D000044 8.1e-08 60.8 129 32.6
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
QL02p080030 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
QL02p080185 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-08 60.8 133 31.6
ECA234G0919 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-07 60.5 132 32.6
Sabra18G0063200 Salix brachista HOM05D000047 ORTHO05D000044 1.1e-07 60.5 91 40.7
Sopen01g029240 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-07 60.5 131 35.1
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen09g008970 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-07 60.5 131 35.1
ECA232G4263 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.4e-07 60.1 131 32.8
Oeu055468.1 Olea europaea HOM05D000047 ORTHO05D000044 1.4e-07 60.1 133 33.8
Oeu038336.1 Olea europaea HOM05D000047 ORTHO05D000044 1.8e-07 59.7 131 34.4
PGR031G3106 Punica granatum HOM05D000047 ORTHO05D000044 1.8e-07 59.7 132 31.1
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-07 59.7 129 34.9
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-07 59.7 131 35.1
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-07 59.7 131 35.1
Sopen09g023240 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-07 59.7 131 35.1
TWI73G0191 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-07 59.7 125 32.0
TWI81G0544 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-07 59.7 129 30.2
Hma1.2p1_0568F.1_g180220 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 2.4e-07 59.3 131 33.6
TWI15G0334 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.4e-07 59.3 129 30.2
CANSAT35G1308 Cannabis sativa HOM05D000047 ORTHO05D000044 3.1e-07 58.9 110 32.7
ECA246G0854 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-07 58.9 130 33.1
PGR119G1896 Punica granatum HOM05D000047 ORTHO05D000044 3.1e-07 58.9 132 32.6
TWI31G0471 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.1e-07 58.9 129 30.2
ECA233G1661 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.0e-07 58.5 83 39.8
ECA246G4401 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.0e-07 58.5 131 32.8
ECA247G0519 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.0e-07 58.5 131 32.8
PSO063G1345 Papaver somniferum HOM05D000047 ORTHO05D000044 4.0e-07 58.5 135 32.6
PGR031G1895 Punica granatum HOM05D000047 ORTHO05D000044 4.0e-07 58.5 132 31.8
CANSAT25G0149 Cannabis sativa HOM05D000047 ORTHO05D000044 5.3e-07 58.2 110 31.8
ECA233G0857 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
ECA238G4495 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.3e-07 58.2 90 40.0
ECA247G3862 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.3e-07 58.2 88 38.6
FvH4_4g05273 Fragaria vesca HOM05D000047 ORTHO05D000044 5.3e-07 58.2 129 31.0
FvH4_6g33651 Fragaria vesca HOM05D000047 ORTHO05D000044 5.3e-07 58.2 129 31.8
PGR031G0834 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
PGR031G1973 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
PGR031G3584 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
PGR044G2529 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
PGR100G0006 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
PGR100G0012 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
PGR102G0360 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 32.6
PGR119G0164 Punica granatum HOM05D000047 ORTHO05D000044 5.3e-07 58.2 132 31.8
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 5.3e-07 58.2 128 34.4
ECA233G0781 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-07 57.8 132 30.3
ECA238G4147 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-07 57.8 131 32.8
ECA248G0075 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-07 57.8 132 34.1
Oeu026298.1 Olea europaea HOM05D000047 ORTHO05D000044 6.9e-07 57.8 131 30.5
PGR083G1005 Punica granatum HOM05D000047 ORTHO05D000044 6.9e-07 57.8 132 31.8
PGR102G3174 Punica granatum HOM05D000047 ORTHO05D000044 6.9e-07 57.8 129 31.0
PGR102G3264 Punica granatum HOM05D000047 ORTHO05D000044 6.9e-07 57.8 129 31.0
PGR142G1408 Punica granatum HOM05D000047 ORTHO05D000044 6.9e-07 57.8 129 31.0
PGR142G3385 Punica granatum HOM05D000047 ORTHO05D000044 6.9e-07 57.8 129 31.0
ECA232G0489 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-07 57.4 131 32.1
ECA232G3856 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-07 57.4 84 36.9
ECA238G1133 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-07 57.4 129 31.8
ECA238G1162 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-07 57.4 84 39.3
PGR031G2501 Punica granatum HOM05D000047 ORTHO05D000044 9.0e-07 57.4 129 30.2
AUR62035178 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.2e-06 57.0 129 31.0
COL.COLO4_12027 Corchorus olitorius HOM05D000047 ORTHO05D000044 1.2e-06 57.0 138 34.8
ECA247G0597 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.2e-06 57.0 131 32.1
Oeu014040.1 Olea europaea HOM05D000047 ORTHO05D000044 1.2e-06 57.0 135 33.3
Oeu050121.1 Olea europaea HOM05D000047 ORTHO05D000044 1.2e-06 57.0 125 31.2
Oeu060313.1 Olea europaea HOM05D000047 ORTHO05D000044 1.2e-06 57.0 131 30.5
PGR083G0324 Punica granatum HOM05D000047 ORTHO05D000044 1.2e-06 57.0 129 31.0
PGR083G2214 Punica granatum HOM05D000047 ORTHO05D000044 1.2e-06 57.0 129 31.8
EL10Ac9g22429 Beta vulgaris HOM05D000047 ORTHO05D000044 1.5e-06 56.6 133 25.6
ECA234G3467 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.5e-06 56.6 83 38.6
ECA236G4954 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.5e-06 56.6 131 32.1
ECA246G2553 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.5e-06 56.6 88 37.5
PSO063G0650 Papaver somniferum HOM05D000047 ORTHO05D000044 1.5e-06 56.6 138 29.7
PGR102G1496 Punica granatum HOM05D000047 ORTHO05D000044 1.5e-06 56.6 123 30.1
PGR119G2436 Punica granatum HOM05D000047 ORTHO05D000044 1.5e-06 56.6 129 31.8
SEGI_40438 Sequoiadendron giganteum HOM05D000080 ORTHO05D000053 1.5e-06 56.6 130 33.1
ECA240G0186 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-06 56.2 131 32.1
ECA248G1019 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-06 56.2 88 37.5
Oeu025758.1 Olea europaea HOM05D000047 ORTHO05D000044 2.0e-06 56.2 131 30.5
PGR042G0186 Punica granatum HOM05D000047 ORTHO05D000044 2.0e-06 56.2 128 32.8
PGR102G2161 Punica granatum HOM05D000047 ORTHO05D000044 2.0e-06 56.2 128 32.8
PGR119G1514 Punica granatum HOM05D000047 ORTHO05D000044 2.0e-06 56.2 129 31.8
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-06 56.2 131 33.6
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-06 56.2 130 34.6
AUR62006787 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.6e-06 55.8 129 31.0
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.6e-06 55.8 134 30.6
Hma1.2p1_0428F.1_g150780 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 2.6e-06 55.8 130 32.3
Oeu003901.1 Olea europaea HOM05D000047 ORTHO05D000044 2.6e-06 55.8 131 30.5
PSO210G1809 Papaver somniferum HOM05D000047 ORTHO05D000044 2.6e-06 55.8 135 28.1
PGR102G0951 Punica granatum HOM05D000047 ORTHO05D000044 3.4e-06 55.5 128 32.8
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 3.4e-06 55.5 116 34.5
TAR583G0002 Trochodendron aralioides HOM05D000047 ORTHO05D000044 3.4e-06 55.5 130 31.5
ECA232G4508 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.5e-06 55.1 131 31.3
ECA233G2318 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.5e-06 55.1 83 39.8
ECA234G3941 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.5e-06 55.1 131 31.3
Sopen02g008830 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-06 55.1 128 32.8
Sopen04g021430 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-06 55.1 131 32.1
Sopen08g010270 Solanum pennellii HOM05D000047 ORTHO05D001383 4.5e-06 55.1 132 34.8
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 5.8e-06 54.7 131 32.8
PSO170G1785 Papaver somniferum HOM05D000047 ORTHO05D000044 7.6e-06 54.3 132 28.0
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 7.6e-06 54.3 131 33.6
ECA233G4974 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.0e-05 53.9 131 31.3
Sopen01g018390 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-05 53.9 131 33.6


User provided reference genes

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