Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045943 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 1.7e-41 172.2 85 100.0
vmacro21635 Vaccinium macrocarpon HOM05D003563 ORTHO05D005325 3.5e-18 94.7 108 51.9
Glyma.06G032500 Glycine max HOM05D003563 ORTHO05D005325 1.6e-15 85.9 108 50.0
FAN27G1814 Fragaria x ananassa HOM05D003563 ORTHO05D005325 1.8e-14 82.4 106 48.1
Haze_07272 Corylus avellana HOM05D003563 ORTHO05D005325 2.5e-11 72.0 104 43.3
Hund14325 Selenicereus undatus HOM05D003563 ORTHO05D005325 2.5e-11 72.0 85 49.4
Atru.chr13.492 Acer truncatum HOM05D003563 ORTHO05D005325 3.2e-11 71.6 104 42.3
ClCG08G015170 Citrullus lanatus HOM05D003563 ORTHO05D005325 3.2e-11 71.6 104 43.3
SGA_v2.0_scaffold54G19524 Striga asiatica HOM05D003563 ORTHO05D005325 3.2e-11 71.6 104 42.3
Nitab4.5_0009269g0010 Nicotiana tabacum HOM05D003563 ORTHO05D005325 4.2e-11 71.2 104 42.3
ATR0057G040 Amborella trichopoda HOM05D003563 ORTHO05D005325 5.5e-11 70.9 91 47.3
QL02p008438 Quercus lobata HOM05D003563 ORTHO05D005325 9.4e-11 70.1 104 41.3
Rhsim06G0034400 Rhododendron simsii HOM05D003563 ORTHO05D005325 1.2e-10 69.7 94 45.7
arahy.Tifrunner.gnm1.ann1.7JQX15 Arachis hypogaea HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
arahy.Tifrunner.gnm1.ann1.UW0ZL7 Arachis hypogaea HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
Ca_04241_v3 Cicer arietinum L. HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
MELO3C010936.2 Cucumis melo HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
CsaV3_2G028640 Cucumis sativus L. HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
Duzib093G1625 Durio zibethinus HOM05D003563 ORTHO05D005325 1.6e-10 69.3 93 45.2
Migut.C00716 Erythranthe guttata HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
Eucgr.F01561 Eucalyptus grandis HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
Lj7C352G3 Lonicera japonica HOM05D003563 ORTHO05D005325 1.6e-10 69.3 104 41.3
MBI16_g36556_MAGBIO Magnolia biondii HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
Medtr6g009330 Medicago truncatula HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
PSO541G4717 Papaver somniferum HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
PSO675G8753 Papaver somniferum HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
TPR.G32590 Trifolium pratense HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
TWI56G0595 Tripterygium wilfordii HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
GSVIVG01009697001 Vitis vinifera HOM05D003563 ORTHO05D005325 1.6e-10 69.3 91 46.2
COL.COLO4_26329 Corchorus olitorius HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 46.2
Gohir.D01G104300 Gossypium hirsutum HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 46.2
Gorai.002G128400 Gossypium raimondii HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 46.2
Sed0015721 Sechium edule HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 46.2
Sed0018414 Sechium edule HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 46.2
HPP92_002698 Vanilla planifolia HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 45.1
HPP92_002716 Vanilla planifolia HOM05D003563 ORTHO05D005325 2.1e-10 68.9 91 45.1
Aa31LG9G12790 Aethionema arabicum HOM05D003563 ORTHO05D005325 2.7e-10 68.6 104 41.3
EL10Ac5g11903 Beta vulgaris HOM05D003563 ORTHO05D005325 2.7e-10 68.6 104 42.3
CANSAT25G0144 Cannabis sativa HOM05D003563 ORTHO05D005325 2.7e-10 68.6 93 45.2
Cfa018145 Carpinus fangiana HOM05D003563 ORTHO05D005325 2.7e-10 68.6 89 47.2
Aqoxy6G01090 Aquilegia oxysepala HOM05D003563 ORTHO05D005325 3.6e-10 68.2 91 45.1
AT5G42740 Arabidopsis thaliana HOM05D003563 ORTHO05D005325 3.6e-10 68.2 91 45.1
AUR62007425 Chenopodium quinoa HOM05D003563 ORTHO05D005325 3.6e-10 68.2 104 42.3
AUR62027308 Chenopodium quinoa HOM05D003563 ORTHO05D005325 3.6e-10 68.2 104 42.3
FAN15G3737 Fragaria x ananassa HOM05D003563 ORTHO05D005325 3.6e-10 68.2 104 41.3
CARHR213980 Cardamine hirsuta HOM05D003563 ORTHO05D005325 4.6e-10 67.8 91 44.0
Peaxi162Scf00333g00512 Petunia axillaris HOM05D003563 ORTHO05D005325 4.6e-10 67.8 104 40.4
Phvul.009G057500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 4.6e-10 67.8 91 45.1
Psat1g077120 Pisum sativum HOM05D003563 ORTHO05D005325 4.6e-10 67.8 91 45.1
THA.LOC104798643 Tarenaya hassleriana HOM05D003563 ORTHO05D005325 4.6e-10 67.8 91 44.0
Thecc.08G025500 Theobroma cacao HOM05D003563 ORTHO05D005325 4.6e-10 67.8 91 45.1
VMungo1309G1719 Vigna mungo HOM05D003563 ORTHO05D005325 4.6e-10 67.8 91 45.1
Ah.02g117440 Amaranthus hybridus HOM05D003563 ORTHO05D005325 6.1e-10 67.4 104 41.3
Glyma.19G017200 Glycine max HOM05D003563 ORTHO05D005325 6.1e-10 67.4 91 45.1
Phvul.004G023500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 6.1e-10 67.4 91 45.1
VMungo0464G1044 Vigna mungo HOM05D003563 ORTHO05D005325 6.1e-10 67.4 91 45.1
BraA09t37600Z Brassica rapa HOM05D003563 ORTHO05D005325 7.9e-10 67.0 90 44.4
CANSAT21G1125 Cannabis sativa HOM05D003563 ORTHO05D005325 7.9e-10 67.0 93 45.2
Carub.0008s0621 Capsella rubella HOM05D003563 ORTHO05D005325 7.9e-10 67.0 91 44.0
CARHR181650 Cardamine hirsuta HOM05D003563 ORTHO05D005325 7.9e-10 67.0 91 42.9
CiPaw.15G077500 Carya illinoinensis HOM05D003563 ORTHO05D005325 7.9e-10 67.0 91 45.1
SalBow7G2312 Salvia bowleyana HOM05D003563 ORTHO05D005325 7.9e-10 67.0 89 46.1
BcaB07g31058 Brassica carinata HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
BcaC04g21978 Brassica carinata HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
C09p25230 Brassica napus HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
DCAR_020972 Daucus carota HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
Dinv39412 Davidia involucrata HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 46.2
Manes.05G160800 Manihot esculenta HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
Oeu029861.1 Olea europaea HOM05D003563 ORTHO05D005325 1.0e-09 66.6 104 40.4
SHI08159 Sapria himalayana HOM05D003563 ORTHO05D005325 1.0e-09 66.6 104 39.4
Sp2g07360 Schrenkiella parvula HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
TAR381G1659 Trochodendron aralioides HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
unitig_37.g12990 Utricularia gibba HOM05D003563 ORTHO05D005325 1.0e-09 66.6 91 44.0
CSS0026525 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D015420 1.4e-09 66.2 38 84.2
Cpa.g.sc36.68 Carica papaya HOM05D003563 ORTHO05D005325 1.4e-09 66.2 91 44.0
SEGI_25229 Sequoiadendron giganteum HOM05D003563 ORTHO05D005325 1.4e-09 66.2 91 44.0
A09p19900 Brassica napus HOM05D003563 ORTHO05D005325 1.8e-09 65.9 89 44.9
BolC9t55419H Brassica oleracea HOM05D003563 ORTHO05D005325 1.8e-09 65.9 89 44.9
CSS0002435 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 1.8e-09 65.9 91 45.1
Lj1g0022254 Lotus japonicus HOM05D003563 ORTHO05D005325 1.8e-09 65.9 91 45.1
Os06g0256500 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 1.8e-09 65.9 91 44.0
PGR083G2760 Punica granatum HOM05D003563 ORTHO05D005325 1.8e-09 65.9 91 42.9
Sc02g0006230 Simmondsia chinensis HOM05D003563 ORTHO05D005325 1.8e-09 65.9 91 45.1
Gohir.A01G116000 Gossypium hirsutum HOM05D003563 ORTHO05D005325 2.3e-09 65.5 91 45.1
Lj4A41G56 Lonicera japonica HOM05D003563 ORTHO05D005325 2.3e-09 65.5 91 44.0
MD08G1034600 Malus domestica HOM05D003563 ORTHO05D005325 2.3e-09 65.5 91 45.1
MD15G1031400 Malus domestica HOM05D003563 ORTHO05D005325 2.3e-09 65.5 91 45.1
Os03g0776000 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 2.3e-09 65.5 91 44.0
Ciclev10000722m.g Citrus clementina HOM05D003563 ORTHO05D005325 3.0e-09 65.1 91 44.0
Dinv36074 Davidia involucrata HOM05D003563 ORTHO05D005325 3.0e-09 65.1 89 46.1
Glyma.04G032600 Glycine max HOM05D003563 ORTHO05D005325 3.9e-09 64.7 91 44.0
Solyc12g014380.3 Solanum lycopersicum HOM05D003563 ORTHO05D005325 3.9e-09 64.7 91 42.9
Sopen12g006150 Solanum pennellii HOM05D003563 ORTHO05D005325 3.9e-09 64.7 91 42.9
MSTRG.25165 Avicennia marina HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 42.9
BcaB07g31057 Brassica carinata HOM05D003563 ORTHO05D005325 5.1e-09 64.3 54 61.1
CDE05G1619 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 44.0
FvH4_2g39910 Fragaria vesca HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 44.0
Nn1g05025 Nelumbo nucifera HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 42.9
Nn5g29576 Nelumbo nucifera HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 44.0
Potri.008G118900 Populus trichocarpa HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 42.9
RcHm_v2.0_Chr6g0300881 Rosa chinensis HOM05D003563 ORTHO05D005325 5.1e-09 64.3 91 44.0
Cc10_g02970 Coffea canephora HOM05D003563 ORTHO05D005325 6.7e-09 63.9 87 46.0
Lalb_Chr23g0266621 Lupinus albus HOM05D003563 ORTHO05D005325 6.7e-09 63.9 91 42.9
Prupe.1G380500 Prunus persica HOM05D003563 ORTHO05D005325 6.7e-09 63.9 91 44.0
Manes.18G027800 Manihot esculenta HOM05D003563 ORTHO05D005325 8.8e-09 63.5 91 42.9
Sabra08G0090300 Salix brachista HOM05D003563 ORTHO05D005325 8.8e-09 63.5 107 39.3
Zm00001eb059230 Zea mays HOM05D003563 ORTHO05D005325 1.1e-08 63.2 91 42.9
MSTRG.1282 Avicennia marina HOM05D003563 ORTHO05D005325 1.5e-08 62.8 91 42.9
HanXRQChr09g0268611 Helianthus annuus HOM05D003563 ORTHO05D005325 2.5e-08 62.0 91 42.9
Actinidia15322 Actinidia chinensis HOM05D003563 ORTHO05D005325 4.3e-08 61.2 43 69.8
Lsat_1_v5_gn_4_119160 Lactuca sativa HOM05D003563 ORTHO05D005325 4.3e-08 61.2 91 41.8
Oeu049958.2 Olea europaea HOM05D003563 ORTHO05D005325 4.3e-08 61.2 43 67.4
Thhalv10003173m.g Eutrema salsugineum HOM05D003563 ORTHO05D005325 5.7e-08 60.8 91 41.8
FAN20G1254 Fragaria x ananassa HOM05D003563 ORTHO05D005325 5.7e-08 60.8 101 39.6
ECA232G1124 Erigeron canadensis HOM05D003563 ORTHO05D005325 7.4e-08 60.5 91 41.8
VMungo0464G1852 Vigna mungo HOM05D003563 ORTHO05D005325 9.7e-08 60.1 52 61.5
CAN.G233.10 Capsicum annuum HOM05D003563 ORTHO05D005325 1.7e-07 59.3 43 65.1
CDE11G0237 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 2.2e-07 58.9 43 65.1
Mapoly0034s0044 Marchantia polymorpha HOM05D003563 ORTHO05D005325 3.7e-07 58.2 91 40.7
AagrBONN_evm.TU.Sc2ySwM_228.405 Anthoceros agrestis HOM05D003563 ORTHO05D005325 1.1e-06 56.6 91 39.6
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 1.1e-06 56.6 91 39.6
MCO02G104 Micromonas commoda HOM05D003563 ORTHO05D005325 3.1e-06 55.1 94 38.3
Pp3c6_18070 Physcomitrium patens HOM05D003563 ORTHO05D005325 4.1e-06 54.7 91 37.4
arahy.Tifrunner.gnm1.ann1.I4AQ4M Arachis hypogaea HOM05D003563 ORTHO05D015420 5.3e-06 54.3 54 51.9
Cre03.g175400 Chlamydomonas reinhardtii HOM05D003563 ORTHO05D005325 6.9e-06 53.9 33 78.8
PRCOL_00005031 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 9.1e-06 53.5 43 60.5


User provided reference genes

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