Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045897 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D110447 2.7e-48 194.9 92 100.0
CSS0013004 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D110501 1.6e-27 125.9 89 73.0
CSS0033080 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D110756 2.5e-25 118.6 76 73.7
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-10 69.3 41 75.6
CSS0006597 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D112990 2.9e-10 68.6 39 76.9
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.0e-10 67.8 41 70.7
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.0e-10 67.8 42 71.4
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.6e-10 67.4 41 73.2
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.6e-10 67.4 41 73.2
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.6e-10 67.0 41 70.7
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-09 66.6 41 70.7
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-09 66.6 43 69.8
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-09 66.6 41 73.2
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-09 65.9 41 70.7
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-09 63.5 39 69.2
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-09 63.5 39 69.2
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 9.5e-09 63.5 38 78.9
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-09 63.5 39 69.2
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-08 63.2 41 65.9
CSS0021717 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-08 61.6 43 72.1
CSS0045133 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-08 61.2 43 60.5
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-08 60.8 39 66.7
CSS0033194 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 8.0e-08 60.5 46 63.0
CSS0048334 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000002 8.0e-08 60.5 35 74.3
CSS0010378 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D110722 1.0e-07 60.1 40 72.5
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-07 59.3 39 64.1
CSS0017517 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-07 59.3 33 78.8
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-07 59.3 39 64.1
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-07 59.3 61 52.5
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-07 58.9 41 65.9
CSS0049314 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-07 58.9 43 65.1
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-07 58.5 39 64.1
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.0e-07 58.2 41 58.5
CSS0040350 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D111571 4.0e-07 58.2 33 78.8
CSS0009189 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D111399 5.2e-07 57.8 49 59.2
CSS0001665 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D024693 6.8e-07 57.4 33 72.7
CSS0034278 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.8e-07 57.4 34 70.6
CSS0012116 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D015543 8.9e-07 57.0 32 81.2
CSS0037515 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.9e-07 57.0 33 69.7
CSS0043234 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.9e-07 57.0 33 69.7
CSS0016399 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D109987 1.2e-06 56.6 40 67.5
CSS0008665 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-06 56.2 29 82.8
CSS0026142 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D015543 1.5e-06 56.2 29 89.7
CSS0009199 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 2.6e-06 55.5 32 78.1
CSS0011884 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D112627 2.6e-06 55.5 44 61.4
CSS0043840 Camellia sinensis var. sinensis HOM05D019068 ORTHO05D111368 2.6e-06 55.5 44 56.8
CSS0007251 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 3.4e-06 55.1 31 77.4
CSS0002780 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.4e-06 54.7 33 66.7
CSS0027868 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D112186 7.5e-06 53.9 28 85.7
Sopen05g017870 Solanum pennellii HOM05D000004 ORTHO05D000002 9.8e-06 53.5 43 55.8


User provided reference genes

Program Settings