Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 1.2e-61 240.0 148 100.0
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 3.5e-13 79.0 115 43.5
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 6.0e-13 78.2 94 53.2
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 3.9e-12 75.5 81 58.0
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 1.1e-11 73.9 115 42.6
Peaxi162Scf01312g00019 Petunia axillaris HOM05D008362 ORTHO05D010554 7.3e-11 71.2 147 49.0
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 9.5e-11 70.9 84 54.8
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 2.8e-10 69.3 74 50.0
Sc17g0002020 Simmondsia chinensis HOM05D008362 ORTHO05D010554 2.8e-10 69.3 106 42.5
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 6.2e-10 68.2 153 42.5
Nitab4.5_0002671g0030 Nicotiana tabacum HOM05D008362 ORTHO05D010554 8.1e-10 67.8 106 42.5
MSTRG.20975 Avicennia marina HOM05D008362 ORTHO05D010554 1.4e-09 67.0 117 44.4
Solyc06g083250.4 Solanum lycopersicum HOM05D008362 ORTHO05D010554 1.8e-09 66.6 118 43.2
Cc01_g16550 Coffea canephora HOM05D008362 ORTHO05D010554 4.0e-09 65.5 124 43.5
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 5.2e-09 65.1 99 42.4
Nitab4.5_0003020g0140 Nicotiana tabacum HOM05D008362 ORTHO05D010554 5.2e-09 65.1 95 42.1
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 1.5e-08 63.5 104 45.2
Thecc.01G217300 Theobroma cacao HOM05D008362 ORTHO05D010554 3.4e-08 62.4 85 49.4
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 4.4e-08 62.0 114 44.7
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 5.8e-08 61.6 104 43.3
unitig_746.g26595 Utricularia gibba HOM05D008362 ORTHO05D010554 7.6e-08 61.2 106 44.3
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 1.3e-07 60.5 148 51.4
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 2.9e-07 59.3 32 90.6
Duzib211G0336 Durio zibethinus HOM05D008362 ORTHO05D010554 2.9e-07 59.3 91 51.6
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 4.9e-07 58.5 61 55.7
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 6.4e-07 58.2 95 51.6
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 8.4e-07 57.8 104 40.4
Actinidia30043 Actinidia chinensis HOM05D008362 ORTHO05D010554 1.1e-06 57.4 74 50.0
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 1.1e-06 57.4 81 50.6
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.4e-06 57.0 70 60.0
HanXRQChr06g0172231 Helianthus annuus HOM05D008362 ORTHO05D010554 1.4e-06 57.0 104 43.3
Prupe.8G196600 Prunus persica HOM05D008362 ORTHO05D010554 1.9e-06 56.6 148 45.3
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 2.4e-06 56.2 61 59.0
Gohir.D07G096800 Gossypium hirsutum HOM05D008362 ORTHO05D010554 3.2e-06 55.8 61 65.6
Gorai.001G104200 Gossypium raimondii HOM05D008362 ORTHO05D010554 4.2e-06 55.5 61 63.9
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 4.2e-06 55.5 31 83.9
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 5.4e-06 55.1 34 85.3


User provided reference genes

Program Settings