Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.0e-105 385.2 194 100.0
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.7e-104 380.9 194 99.0
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.6e-103 379.4 194 99.0
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.5e-96 355.5 194 94.8
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.7e-96 354.4 194 94.3
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-93 346.7 194 93.3
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.4e-93 345.1 198 90.9
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.9e-60 235.7 175 73.1
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.5e-59 233.4 175 73.1
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 7.5e-48 194.5 133 74.4
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 1.4e-46 190.3 136 70.6
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 1.1e-43 180.6 141 67.4
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 7.0e-38 161.4 133 63.9
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 7.0e-38 161.4 133 63.9
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 7.0e-38 161.4 133 63.9
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 7.0e-38 161.4 133 63.9
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 2.0e-32 143.3 126 57.9
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 3.4e-32 142.5 132 53.8
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 9.8e-32 141.0 127 57.5
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 1.3e-31 140.6 126 54.0
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 3.7e-31 139.0 122 57.4
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 4.9e-31 138.7 121 56.2
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 1.4e-30 137.1 126 50.8
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 1.4e-30 137.1 130 50.0
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 2.4e-30 136.3 122 54.9
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 2.4e-30 136.3 122 52.5
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 5.4e-30 135.2 126 51.6
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 7.1e-30 134.8 138 45.7
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 1.2e-29 134.0 126 54.0
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 2.7e-29 132.9 122 51.6
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 3.5e-29 132.5 130 52.3
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 7.8e-29 131.3 142 45.8
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 1.3e-28 130.6 134 47.8
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.3e-28 129.8 126 50.0
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 3.9e-28 129.0 126 50.0
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 3.9e-28 129.0 131 52.7
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 6.6e-28 128.3 126 48.4
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 6.6e-28 128.3 129 50.4
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.5e-27 127.1 131 48.1
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 3.3e-27 125.9 140 47.1
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 5.6e-27 125.2 157 43.3
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 7.3e-27 124.8 126 49.2
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 2.1e-26 123.2 131 49.6
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 1.8e-25 120.2 131 48.9
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 3.1e-25 119.4 124 48.4
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 4.0e-25 119.0 123 49.6
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 5.2e-25 118.6 125 44.0
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 5.2e-25 118.6 141 44.0
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 6.8e-25 118.2 126 49.2
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 2.0e-24 116.7 128 46.1
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 2.0e-24 116.7 129 48.8
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 2.0e-24 116.7 126 46.8
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 4.4e-24 115.5 126 49.2
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 7.6e-24 114.8 126 44.4
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 7.6e-24 114.8 126 44.4
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 1.3e-23 114.0 132 49.2
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.2e-23 113.2 106 53.8
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 4.9e-23 112.1 134 42.5
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 4.9e-23 112.1 135 43.0
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 1.6e-21 107.1 141 47.5
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 4.6e-21 105.5 126 44.4
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 4.6e-21 105.5 126 47.6
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.3e-20 103.2 137 41.6
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 6.6e-20 101.7 130 36.9
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 1.1e-19 100.9 126 45.2
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 2.4e-17 93.2 104 46.2
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 4.0e-17 92.4 131 39.7
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 2.6e-16 89.7 55 65.5
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 1.6e-13 80.5 54 61.1
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 2.1e-13 80.1 76 52.6
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 2.7e-13 79.7 123 39.0
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 4.6e-13 79.0 50 64.0
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 1.3e-12 77.4 104 36.5
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 6.6e-12 75.1 100 42.0
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 4.8e-10 68.9 41 68.3
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 9.9e-08 61.2 50 44.0
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 1.4e-06 57.4 55 47.3


User provided reference genes

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