Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045874 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.2e-118 429.9 221 100.0
CSS0017146 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.9e-95 352.8 214 85.5
CSS0035513 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 2.7e-94 349.0 214 85.0
CSS0018541 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 2.0e-65 253.1 207 69.6
Actinidia19752 Actinidia chinensis HOM05D002036 ORTHO05D001913 7.5e-52 208.0 221 56.6
CSS0022078 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.8e-50 203.4 220 56.8
Rhsim05G0186600 Rhododendron simsii HOM05D002036 ORTHO05D001913 2.6e-44 183.0 220 51.4
Dinv35653 Davidia involucrata HOM05D002036 ORTHO05D001913 2.3e-40 169.9 215 50.2
Dinv37219 Davidia involucrata HOM05D002036 ORTHO05D001913 4.0e-37 159.1 217 47.9
Actinidia05291 Actinidia chinensis HOM05D002036 ORTHO05D001913 3.7e-35 152.5 215 46.5
vmacro20108 Vaccinium macrocarpon HOM05D002036 ORTHO05D001913 3.2e-34 149.4 245 43.3
Hma1.2p1_0111F.1_g053220 Hydrangea macrophylla HOM05D002036 ORTHO05D001913 1.2e-25 120.9 208 44.2
Haze_20717 Corylus avellana HOM05D002036 ORTHO05D001913 2.8e-22 109.8 209 36.4
CiPaw.09G187300 Carya illinoinensis HOM05D002036 ORTHO05D001913 1.4e-21 107.5 214 35.5
Cfa017446 Carpinus fangiana HOM05D002036 ORTHO05D001913 5.8e-20 102.1 198 36.4
QL07p046595 Quercus lobata HOM05D002036 ORTHO05D001913 4.9e-19 99.0 162 39.5
Atru.chr8.2482 Acer truncatum HOM05D002036 ORTHO05D001913 1.1e-18 97.8 187 37.4
TAR157G0003 Trochodendron aralioides HOM05D002036 ORTHO05D001913 1.4e-18 97.4 220 35.9
Oeu060059.1 Olea europaea HOM05D002036 ORTHO05D001913 2.4e-18 96.7 218 35.8
Ciclev10011022m.g Citrus clementina HOM05D002036 ORTHO05D001913 7.1e-18 95.1 213 34.7
GSVIVG01025600001 Vitis vinifera HOM05D002036 ORTHO05D001913 1.6e-17 94.0 216 35.6
CiPaw.10G141600 Carya illinoinensis HOM05D002036 ORTHO05D001913 3.0e-16 89.7 149 44.3
Manes.08G076600 Manihot esculenta HOM05D002036 ORTHO05D001913 3.0e-16 89.7 174 40.2
Manes.09G085700 Manihot esculenta HOM05D002036 ORTHO05D001913 3.0e-16 89.7 193 34.7
Sabra16G0088100 Salix brachista HOM05D002036 ORTHO05D001913 2.5e-15 86.7 210 31.9
Potri.016G080200 Populus trichocarpa HOM05D002036 ORTHO05D001913 2.3e-13 80.1 210 31.0
Oeu023869.2 Olea europaea HOM05D002036 ORTHO05D001913 4.0e-13 79.3 204 34.8
Sabra06G0164600 Salix brachista HOM05D002036 ORTHO05D001913 6.8e-13 78.6 179 33.5
Lj5g0022058 Lotus japonicus HOM05D002036 ORTHO05D001913 3.4e-12 76.3 215 30.2
Oeu049192.1 Olea europaea HOM05D002036 ORTHO05D001913 3.4e-12 76.3 193 35.8
Lj2C101T4 Lonicera japonica HOM05D002036 ORTHO05D001913 5.8e-12 75.5 216 33.8
Potri.006G213700 Populus trichocarpa HOM05D002036 ORTHO05D001913 5.8e-12 75.5 129 38.8
Prupe.6G247900 Prunus persica HOM05D002036 ORTHO05D001913 5.8e-12 75.5 207 32.4
EL10Ac7g17299 Beta vulgaris HOM05D002036 ORTHO05D001913 1.7e-11 73.9 213 31.9
Cpa.g.sc2422.1 Carica papaya HOM05D002036 ORTHO05D001913 2.9e-11 73.2 203 32.0
RcHm_v2.0_Chr3g0467721 Rosa chinensis HOM05D002036 ORTHO05D001913 4.9e-11 72.4 119 41.2
Cc06_g03130 Coffea canephora HOM05D002036 ORTHO05D001913 6.4e-11 72.0 212 32.1
Lalb_Chr21g0314431 Lupinus albus HOM05D002036 ORTHO05D001913 1.1e-10 71.2 207 28.5
TWI74G0701 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 1.4e-10 70.9 115 40.9
Thecc.05G046700 Theobroma cacao HOM05D002036 ORTHO05D001913 1.9e-10 70.5 198 32.3
Nn2g10515 Nelumbo nucifera HOM05D002036 ORTHO05D001913 2.4e-10 70.1 192 32.8
VMungo0720G0853 Vigna mungo HOM05D002036 ORTHO05D001913 2.4e-10 70.1 187 32.6
COL.COLO4_09164 Corchorus olitorius HOM05D002036 ORTHO05D001913 9.2e-10 68.2 132 38.6
Phvul.001G171300 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 9.2e-10 68.2 193 31.6
TAR633G1128 Trochodendron aralioides HOM05D002036 ORTHO05D001913 9.2e-10 68.2 190 32.1
FAN02G2099 Fragaria x ananassa HOM05D002036 ORTHO05D001913 1.2e-09 67.8 154 35.1
Sc01g0003870 Simmondsia chinensis HOM05D002036 ORTHO05D001913 1.2e-09 67.8 203 31.5
FAN05G4012 Fragaria x ananassa HOM05D002036 ORTHO05D001913 1.6e-09 67.4 214 29.9
AUR62040988 Chenopodium quinoa HOM05D002036 ORTHO05D001913 2.1e-09 67.0 191 29.8
FvH4_6g14620 Fragaria vesca HOM05D002036 ORTHO05D001913 2.1e-09 67.0 213 29.1
FAN14G3656 Fragaria x ananassa HOM05D002036 ORTHO05D001913 2.1e-09 67.0 213 29.1
Phvul.007G159500 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 2.1e-09 67.0 228 31.1
AUR62042966 Chenopodium quinoa HOM05D002036 ORTHO05D001913 4.6e-09 65.9 187 32.1
Ah.08g212260 Amaranthus hybridus HOM05D002036 ORTHO05D001913 6.0e-09 65.5 218 30.7
arahy.Tifrunner.gnm1.ann1.91Z2HD Arachis hypogaea HOM05D002036 ORTHO05D001913 6.0e-09 65.5 186 33.3
FAN09G1592 Fragaria x ananassa HOM05D002036 ORTHO05D001913 6.0e-09 65.5 214 29.4
Sc20g0004420 Simmondsia chinensis HOM05D002036 ORTHO05D001913 6.0e-09 65.5 135 37.8
TWI77G0326 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 6.0e-09 65.5 121 38.0
Duzib128G0163 Durio zibethinus HOM05D002036 ORTHO05D001913 7.8e-09 65.1 200 33.0
TPR.G23073 Trifolium pratense HOM05D002036 ORTHO05D001913 1.3e-08 64.3 219 29.7
PGR004G2455 Punica granatum HOM05D002036 ORTHO05D001913 1.7e-08 63.9 122 41.0
PSO206G0030 Papaver somniferum HOM05D002036 ORTHO05D001913 3.9e-08 62.8 131 35.9
Hund24066 Selenicereus undatus HOM05D002036 ORTHO05D001913 3.9e-08 62.8 155 32.3
MD04G1118500 Malus domestica HOM05D002036 ORTHO05D001913 5.1e-08 62.4 194 30.4
CANSAT49G0001 Cannabis sativa HOM05D002036 ORTHO05D001913 6.6e-08 62.0 202 28.2
MBI05_g07856_MAGBIO Magnolia biondii HOM05D002036 ORTHO05D001913 1.1e-07 61.2 111 41.4
VMungo1383G2286 Vigna mungo HOM05D002036 ORTHO05D001913 2.5e-07 60.1 180 32.2
Ah.08g212270 Amaranthus hybridus HOM05D002036 ORTHO05D001913 4.3e-07 59.3 97 39.2
Aqoxy4G03055 Aquilegia oxysepala HOM05D002036 ORTHO05D001913 4.3e-07 59.3 113 38.9
Glyma.10G045600 Glycine max HOM05D002036 ORTHO05D001913 4.3e-07 59.3 115 32.2
DCAR_017894 Daucus carota HOM05D002036 ORTHO05D001913 5.6e-07 58.9 227 29.1
Ca_09596_v3 Cicer arietinum L. HOM05D002036 ORTHO05D001913 9.6e-07 58.2 184 28.3
Duzib106G0638 Durio zibethinus HOM05D002036 ORTHO05D001913 9.6e-07 58.2 144 32.6
Lj1g0026714 Lotus japonicus HOM05D002036 ORTHO05D001913 1.2e-06 57.8 183 31.7
Medtr1g067570 Medicago truncatula HOM05D002036 ORTHO05D001913 1.2e-06 57.8 140 31.4
MSTRG.5695 Avicennia marina HOM05D002036 ORTHO05D001913 1.6e-06 57.4 199 31.2
MSTRG.19112 Avicennia marina HOM05D002036 ORTHO05D001913 2.1e-06 57.0 144 35.4
Gohir.A09G159300 Gossypium hirsutum HOM05D002036 ORTHO05D001913 2.1e-06 57.0 199 31.7
HanXRQChr14g0453801 Helianthus annuus HOM05D002036 ORTHO05D001913 2.1e-06 57.0 216 28.2
PSO339G0404 Papaver somniferum HOM05D002036 ORTHO05D001913 2.8e-06 56.6 131 34.4
Dinv31404 Davidia involucrata HOM05D002036 ORTHO05D001913 3.6e-06 56.2 153 28.1
Duzib093G0032 Durio zibethinus HOM05D002036 ORTHO05D001913 4.7e-06 55.8 119 36.1
Glyma.03G173900 Glycine max HOM05D002036 ORTHO05D001913 6.2e-06 55.5 203 25.6
Glyma.13G133500 Glycine max HOM05D002036 ORTHO05D001913 6.2e-06 55.5 208 26.4
Gohir.D09G154900 Gossypium hirsutum HOM05D002036 ORTHO05D001913 6.2e-06 55.5 172 32.0


User provided reference genes

Program Settings