Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045840 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 1.3e-38 162.5 80 100.0
CSS0002644 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 5.0e-14 80.9 52 78.8
Actinidia21698 Actinidia chinensis HOM05D003266 ORTHO05D003718 2.0e-10 68.9 52 63.5
CSS0038057 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 4.4e-10 67.8 52 65.4
CSS0038683 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 4.4e-10 67.8 52 65.4
Dinv38001 Davidia involucrata HOM05D003266 ORTHO05D003718 4.4e-10 67.8 52 61.5
Ca_01149_v3 Cicer arietinum L. HOM05D003266 ORTHO05D003718 9.7e-10 66.6 79 45.6
Ciclev10024815m.g Citrus clementina HOM05D003266 ORTHO05D003718 1.3e-09 66.2 52 61.5
CiPaw.01G233800 Carya illinoinensis HOM05D003266 ORTHO05D003718 8.2e-09 63.5 52 59.6
Psat5g297200 Pisum sativum HOM05D003266 ORTHO05D003718 8.2e-09 63.5 49 57.1
Lsat_1_v5_gn_4_100861 Lactuca sativa HOM05D003266 ORTHO05D003718 1.1e-08 63.2 50 58.0
arahy.Tifrunner.gnm1.ann1.MP8KIY Arachis hypogaea HOM05D003266 ORTHO05D003718 1.4e-08 62.8 50 60.0
arahy.Tifrunner.gnm1.ann1.X5C2Q6 Arachis hypogaea HOM05D003266 ORTHO05D003718 1.4e-08 62.8 50 60.0
Actinidia32711 Actinidia chinensis HOM05D003266 ORTHO05D003718 1.8e-08 62.4 56 58.9
Hma1.2p1_1689F.1_g297680 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 1.8e-08 62.4 50 60.0
Hma1.2p1_1689F.1_g297710 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 1.8e-08 62.4 50 60.0
Lj3g0015133 Lotus japonicus HOM05D003266 ORTHO05D003718 1.8e-08 62.4 52 55.8
Potri.001G186900 Populus trichocarpa HOM05D003266 ORTHO05D003718 1.8e-08 62.4 49 59.2
vmacro18872 Vaccinium macrocarpon HOM05D003266 ORTHO05D003718 2.4e-08 62.0 53 60.4
Glyma.15G017900 Glycine max HOM05D003266 ORTHO05D003718 4.1e-08 61.2 52 55.8
Rhsim08G0225600 Rhododendron simsii HOM05D003266 ORTHO05D003718 4.1e-08 61.2 53 60.4
MD03G1197500 Malus domestica HOM05D003266 ORTHO05D003718 5.3e-08 60.8 52 57.7
Phvul.005G170100 Phaseolus vulgaris HOM05D003266 ORTHO05D003718 5.3e-08 60.8 52 53.8
GSVIVG01017040001 Vitis vinifera HOM05D003266 ORTHO05D003718 5.3e-08 60.8 50 60.0
Lj9C510G10 Lonicera japonica HOM05D003266 ORTHO05D003718 7.0e-08 60.5 41 68.3
Lalb_Chr24g0396021 Lupinus albus HOM05D003266 ORTHO05D003718 7.0e-08 60.5 79 40.5
MD17G1188100 Malus domestica HOM05D003266 ORTHO05D003718 7.0e-08 60.5 52 55.8
RcHm_v2.0_Chr2g0139581 Rosa chinensis HOM05D003266 ORTHO05D003718 9.1e-08 60.1 52 55.8
Duzib160G0509 Durio zibethinus HOM05D003266 ORTHO05D003718 1.2e-07 59.7 52 53.8
Glyma.13G356200 Glycine max HOM05D003266 ORTHO05D003718 1.2e-07 59.7 52 53.8
Manes.11G036300 Manihot esculenta HOM05D003266 ORTHO05D003718 1.2e-07 59.7 52 55.8
TPR.G37248 Trifolium pratense HOM05D003266 ORTHO05D003718 1.2e-07 59.7 47 57.4
ECA232G0114 Erigeron canadensis HOM05D003266 ORTHO05D003718 2.0e-07 58.9 47 53.2
Sed0017993 Sechium edule HOM05D003266 ORTHO05D003718 2.0e-07 58.9 48 60.4
SGA_v2.0_scaffold69G23353 Striga asiatica HOM05D003266 ORTHO05D003718 2.0e-07 58.9 49 55.1
MSTRG.22654 Avicennia marina HOM05D003266 ORTHO05D003718 2.7e-07 58.5 43 65.1
Prupe.3G063700 Prunus persica HOM05D003266 ORTHO05D003718 2.7e-07 58.5 49 55.1
Peaxi162Scf00015g00241 Petunia axillaris HOM05D003266 ORTHO05D003718 3.5e-07 58.2 49 59.2
Sabra01G0153400 Salix brachista HOM05D003266 ORTHO05D003718 3.5e-07 58.2 49 55.1
SalBow2G0145 Salvia bowleyana HOM05D003266 ORTHO05D003718 3.5e-07 58.2 50 54.0
Haze_16335 Corylus avellana HOM05D003266 ORTHO05D003718 4.5e-07 57.8 52 57.7
MELO3C024265.2 Cucumis melo HOM05D003266 ORTHO05D003718 4.5e-07 57.8 48 58.3
QL05p021182 Quercus lobata HOM05D003266 ORTHO05D003718 4.5e-07 57.8 50 54.0
Aa31LG10G2720 Aethionema arabicum HOM05D003266 ORTHO05D003718 5.9e-07 57.4 47 55.3
Migut.I00926 Erythranthe guttata HOM05D003266 ORTHO05D003718 5.9e-07 57.4 43 60.5
Lalb_Chr22g0351451 Lupinus albus HOM05D003266 ORTHO05D003718 5.9e-07 57.4 52 51.9
Thecc.06G095700 Theobroma cacao HOM05D003266 ORTHO05D003718 5.9e-07 57.4 52 51.9
CAN.G438.41 Capsicum annuum HOM05D003266 ORTHO05D003718 7.7e-07 57.0 42 64.3
Sed0020980 Sechium edule HOM05D003266 ORTHO05D003718 7.7e-07 57.0 53 49.1
Sopen00g008370 Solanum pennellii HOM05D003266 ORTHO05D003718 7.7e-07 57.0 43 65.1
PGSC0003DMG401002553 Solanum tuberosum HOM05D003266 ORTHO05D003718 7.7e-07 57.0 43 65.1
PGSC0003DMG402002553 Solanum tuberosum HOM05D003266 ORTHO05D003718 7.7e-07 57.0 43 65.1
TAR626G0182 Trochodendron aralioides HOM05D003266 ORTHO05D003718 7.7e-07 57.0 45 55.6
TAR636G2661 Trochodendron aralioides HOM05D003266 ORTHO05D003718 7.7e-07 57.0 45 55.6
Atru.chr1.3468 Acer truncatum HOM05D003266 ORTHO05D003718 1.3e-06 56.2 50 58.0
Cfa002112 Carpinus fangiana HOM05D003266 ORTHO05D003718 1.3e-06 56.2 52 55.8
Lj5C56T10 Lonicera japonica HOM05D003266 ORTHO05D003718 1.3e-06 56.2 52 53.8
Nitab4.5_0002424g0070 Nicotiana tabacum HOM05D003266 ORTHO05D003718 1.3e-06 56.2 49 57.1
VMungo1080G0852 Vigna mungo HOM05D003266 ORTHO05D003718 1.3e-06 56.2 46 54.3
AT1G52160 Arabidopsis thaliana HOM05D003266 ORTHO05D003718 1.7e-06 55.8 41 65.9
Eucgr.J02950 Eucalyptus grandis HOM05D003266 ORTHO05D003718 1.7e-06 55.8 52 51.9
Aqoxy7G01499 Aquilegia oxysepala HOM05D003266 ORTHO05D003718 2.2e-06 55.5 46 54.3
Cc04_g02800 Coffea canephora HOM05D003266 ORTHO05D003718 2.2e-06 55.5 47 51.1
DCAR_026337 Daucus carota HOM05D003266 ORTHO05D003718 2.2e-06 55.5 49 51.0
Prupe.3G063800 Prunus persica HOM05D003266 ORTHO05D003718 2.2e-06 55.5 49 51.0
CsaV3_7G033540 Cucumis sativus L. HOM05D003266 ORTHO05D003718 2.9e-06 55.1 43 62.8
Solyc03g120470.4 Solanum lycopersicum HOM05D003266 ORTHO05D003718 2.9e-06 55.1 43 62.8
Gohir.A10G067100 Gossypium hirsutum HOM05D003266 ORTHO05D003718 3.8e-06 54.7 46 52.2
Gohir.D01G054332 Gossypium hirsutum HOM05D003266 ORTHO05D003718 3.8e-06 54.7 47 53.2
Gohir.D10G068200 Gossypium hirsutum HOM05D003266 ORTHO05D003718 3.8e-06 54.7 46 52.2
Gorai.002G074200 Gossypium raimondii HOM05D003266 ORTHO05D003718 3.8e-06 54.7 47 53.2
Gorai.011G072800 Gossypium raimondii HOM05D003266 ORTHO05D003718 3.8e-06 54.7 46 52.2
Medtr2g101390 Medicago truncatula HOM05D003266 ORTHO05D003718 3.8e-06 54.7 41 58.5
Peaxi162Scf00034g00317 Petunia axillaris HOM05D003266 ORTHO05D003718 3.8e-06 54.7 43 60.5
Sp1g38720 Schrenkiella parvula HOM05D003266 ORTHO05D003718 3.8e-06 54.7 40 60.0
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 5.0e-06 54.3 41 58.5
TWI12G1119 Tripterygium wilfordii HOM05D003266 ORTHO05D003718 6.5e-06 53.9 50 50.0
Oeu040356.1 Olea europaea HOM05D003266 ORTHO05D003718 8.5e-06 53.5 40 57.5


User provided reference genes

Program Settings