Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 3.9e-199 698.0 359 100.0
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 8.6e-199 696.8 359 99.7
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 4.6e-168 594.7 359 82.5
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 6.7e-167 590.9 359 81.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.1e-166 590.1 359 84.1
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 2.2e-162 575.9 360 82.5
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 1.1e-161 573.5 359 80.2
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.1e-161 573.5 359 80.2
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 2.1e-160 569.3 359 79.7
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 2.7e-160 568.9 359 79.4
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 2.7e-160 568.9 359 81.1
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 6.0e-160 567.8 359 78.0
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 6.0e-160 567.8 346 85.5
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 7.9e-160 567.4 359 78.0
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.9e-160 567.4 359 78.0
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 2.3e-159 565.8 359 80.5
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 9.6e-158 560.5 359 79.7
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 4.8e-157 558.1 359 79.4
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 4.8e-157 558.1 359 79.4
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 6.2e-157 557.8 360 78.6
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 2.4e-156 555.8 359 77.7
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 2.4e-156 555.8 359 78.0
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 9.0e-156 553.9 361 76.5
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 1.2e-155 553.5 361 76.7
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 1.5e-155 553.1 359 77.2
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 3.4e-155 552.0 359 76.6
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 8.4e-154 547.4 362 79.3
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.4e-153 546.6 359 76.0
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 3.2e-153 545.4 359 77.2
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 7.1e-153 544.3 359 74.7
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.1e-153 544.3 359 76.9
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 9.3e-153 543.9 323 81.1
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 1.3e-151 540.0 359 76.9
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 8.7e-151 537.3 359 74.9
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 2.5e-150 535.8 359 73.8
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 2.5e-150 535.8 378 72.5
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 9.7e-150 533.9 361 74.2
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.3e-149 533.5 359 73.3
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.1e-148 530.4 359 71.9
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.4e-148 530.0 379 71.5
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.8e-148 529.6 410 66.8
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 9.0e-148 527.3 360 74.4
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 1.2e-147 526.9 350 76.3
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 2.0e-147 526.2 350 76.9
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.0e-147 526.2 360 73.6
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 3.4e-147 525.4 350 76.3
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 4.2e-145 518.5 357 71.4
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 7.2e-145 517.7 353 73.1
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.6e-144 516.5 351 73.8
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.6e-144 516.5 351 73.8
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 4.6e-144 515.0 350 73.7
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 7.9e-144 514.2 405 68.1
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 1.8e-143 513.1 370 71.1
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 3.0e-143 512.3 351 73.2
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 3.9e-143 511.9 351 74.9
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.1e-142 510.4 351 72.9
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.1e-142 510.4 350 73.1
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 3.3e-142 508.8 345 73.3
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 3.3e-142 508.8 352 71.0
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 9.7e-142 507.3 351 72.1
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 9.7e-142 507.3 327 77.1
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.7e-141 505.4 363 70.0
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 4.8e-141 505.0 351 72.9
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 3.1e-140 502.3 359 71.3
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.1e-140 501.9 368 69.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 5.7e-134 481.5 378 69.3
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 2.6e-131 472.6 347 66.6
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 4.5e-131 471.9 347 70.6
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.9e-130 469.2 358 69.0
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 4.2e-129 465.3 349 64.5
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.1e-126 457.2 313 74.4
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 7.4e-126 454.5 359 64.1
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 3.7e-125 452.2 345 63.2
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 2.0e-123 446.4 346 64.7
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 5.9e-123 444.9 322 72.0
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 6.5e-122 441.4 322 72.4
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.2e-120 437.2 343 65.3
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.0e-114 417.5 323 66.9
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.9e-113 413.3 429 54.3
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 2.5e-113 412.9 362 64.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.0e-110 403.3 252 81.7
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.8e-109 399.4 384 58.6
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.4e-108 397.1 378 57.4
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 4.5e-107 392.1 396 55.6
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 3.7e-101 372.5 384 56.0
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 5.0e-98 362.1 367 56.1
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 6.6e-98 361.7 260 70.0
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 3.5e-91 339.3 289 65.7
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 4.6e-91 339.0 357 49.9
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 2.4e-84 316.6 323 46.7
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 9.2e-84 314.7 167 91.0
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 3.0e-82 309.7 246 63.4
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 2.1e-75 287.0 167 79.6
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.5e-73 280.8 172 79.1
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 9.5e-73 278.1 194 75.3
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 2.2e-69 266.9 175 80.0
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 3.8e-69 266.2 175 77.7
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.1e-68 264.6 175 77.1
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 5.6e-65 252.3 170 70.0
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.1e-64 250.4 240 56.2
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.8e-63 247.3 179 73.7
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 7.6e-62 241.9 182 66.5
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 2.9e-61 240.0 307 42.0
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 3.0e-58 229.9 158 71.5
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 8.1e-56 221.9 123 83.7
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 4.0e-55 219.5 172 67.4
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.4e-47 193.7 108 84.3
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.5e-46 191.0 212 53.8
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 1.2e-43 181.4 112 74.1
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 3.9e-42 176.4 131 65.6
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 5.1e-42 176.0 124 64.5
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.5e-38 164.5 140 60.0
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 3.8e-37 159.8 94 77.7
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 3.2e-36 156.8 124 61.3
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 4.2e-36 156.4 91 81.3
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.6e-35 154.5 105 71.4
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 6.1e-35 152.5 345 29.9
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.5e-33 147.9 148 55.4
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 2.0e-30 137.5 115 60.0
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 3.8e-29 133.3 82 81.7
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 3.2e-28 130.2 102 63.7
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 1.4e-26 124.8 75 72.0
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 3.7e-24 116.7 121 43.0
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 2.4e-23 114.0 78 74.4
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 9.1e-23 112.1 79 70.9
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 1.7e-21 107.8 112 56.2
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.1e-20 105.1 225 30.7
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-20 104.4 73 71.2
CiPaw.03G033500 Carya illinoinensis HOM05D006555 ORTHO05D008376 2.9e-13 80.5 240 26.2
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 3.8e-13 80.1 343 25.9
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 5.0e-13 79.7 317 26.5
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 8.5e-13 79.0 339 23.9
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 4.2e-12 76.6 328 23.2
FAN02G0929 Fragaria x ananassa HOM05D006555 ORTHO05D008376 5.5e-12 76.3 247 25.1
FAN05G5565 Fragaria x ananassa HOM05D006555 ORTHO05D008376 5.5e-12 76.3 323 24.1
MSTRG.3197 Avicennia marina HOM05D006555 ORTHO05D008376 7.2e-12 75.9 235 26.4
FvH4_6g49950 Fragaria vesca HOM05D006555 ORTHO05D008376 9.4e-12 75.5 317 23.7
MBI14_g15702_MAGBIO Magnolia biondii HOM05D006555 ORTHO05D008376 1.6e-11 74.7 306 24.8
Sc20g0004830 Simmondsia chinensis HOM05D006555 ORTHO05D008376 3.6e-11 73.6 314 24.2
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 6.1e-11 72.8 314 23.6
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 8.0e-11 72.4 148 30.4
Thecc.04G067100 Theobroma cacao HOM05D006555 ORTHO05D008376 5.2e-10 69.7 309 24.3
AUR62005932 Chenopodium quinoa HOM05D006555 ORTHO05D008376 6.7e-10 69.3 235 25.5
AUR62005935 Chenopodium quinoa HOM05D006555 ORTHO05D008376 6.7e-10 69.3 235 25.5
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 6.7e-10 69.3 242 24.4
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 9.7e-09 65.5 242 25.6
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 2.2e-08 64.3 316 24.4
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 2.8e-08 63.9 246 25.2
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 1.4e-07 61.6 52 59.6
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 3.1e-07 60.5 222 26.6
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 3.5e-06 57.0 314 23.9
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 5.9e-06 56.2 233 23.2


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