Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 3.8e-210 734.6 370 100.0
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 3.2e-180 635.2 370 85.9
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.6e-168 596.3 387 79.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 1.3e-165 586.6 362 80.7
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.7e-165 586.3 387 78.0
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 4.3e-161 571.6 362 77.9
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 8.1e-160 567.4 364 76.9
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 2.0e-158 562.8 364 76.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 5.8e-158 561.2 365 75.6
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.7e-157 559.7 364 76.4
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.7e-157 559.7 362 76.8
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 8.4e-157 557.4 364 75.0
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.9e-156 556.2 364 76.1
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 6.0e-155 551.2 367 75.2
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.3e-154 550.1 363 74.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 2.3e-154 549.3 364 74.7
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.9e-153 546.2 364 75.5
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 9.6e-153 543.9 369 71.5
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.6e-152 543.1 367 73.8
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 2.1e-152 542.7 367 74.9
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.8e-152 542.3 364 74.2
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 3.7e-152 542.0 367 73.8
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 4.8e-152 541.6 365 74.0
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.8e-151 539.7 362 73.5
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.4e-151 539.3 362 75.4
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.3e-149 533.5 364 72.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.3e-149 533.5 371 72.5
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 4.9e-149 531.6 364 73.1
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 2.5e-148 529.3 346 76.0
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 3.2e-148 528.9 362 71.8
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 7.1e-148 527.7 362 71.5
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 7.1e-148 527.7 364 71.2
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 2.7e-147 525.8 366 72.4
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 4.6e-147 525.0 366 72.4
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 4.6e-147 525.0 367 71.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 7.9e-147 524.2 364 72.0
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.8e-146 523.1 364 70.6
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 1.8e-146 523.1 363 71.6
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.0e-146 522.3 367 70.0
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 3.9e-146 521.9 371 70.4
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 6.7e-146 521.2 368 71.7
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 6.7e-146 521.2 368 71.7
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.1e-145 520.4 364 71.2
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.9e-145 519.6 369 71.0
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 9.6e-145 517.3 358 71.8
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 9.6e-145 517.3 367 70.3
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.3e-144 516.9 364 73.9
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 3.7e-144 515.4 364 70.9
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.8e-143 513.1 367 70.3
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 9.0e-143 510.8 347 73.8
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 2.6e-142 509.2 358 70.9
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 2.6e-142 509.2 339 76.4
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.6e-142 509.2 362 70.4
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 7.6e-142 507.7 355 73.0
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 2.2e-141 506.1 365 68.2
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.9e-141 505.8 358 69.3
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 8.4e-141 504.2 358 70.7
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 8.4e-141 504.2 361 68.7
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.4e-140 503.4 369 67.5
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 4.2e-140 501.9 328 74.1
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 7.1e-140 501.1 358 69.6
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.6e-139 500.0 367 68.4
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.7e-139 499.2 358 68.4
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 3.5e-139 498.8 367 69.8
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 6.1e-139 498.0 365 67.7
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.0e-138 497.3 358 68.7
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 3.9e-138 495.4 356 68.8
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 8.7e-138 494.2 358 67.9
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.1e-137 493.8 358 67.9
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 1.5e-137 493.4 360 69.2
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.9e-137 493.0 364 68.7
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.9e-137 493.0 340 73.2
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.5e-137 492.7 365 67.1
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 4.3e-137 491.9 365 67.4
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 5.7e-137 491.5 360 69.2
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.3e-136 490.3 358 68.2
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.2e-136 489.6 362 66.6
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 6.3e-136 488.0 369 68.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-135 487.3 358 67.6
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.9e-133 479.2 315 76.5
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 5.0e-133 478.4 355 67.3
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.1e-132 477.2 440 57.5
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.1e-132 477.2 337 70.3
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 4.2e-132 475.3 370 65.4
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.2e-132 475.3 360 67.2
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.4e-130 470.3 361 66.5
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.4e-130 470.3 407 62.2
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 8.8e-130 467.6 365 63.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.5e-129 466.8 365 65.2
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 3.3e-129 465.7 339 69.6
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 5.7e-129 464.9 365 64.1
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.7e-128 463.4 361 62.3
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 2.8e-128 462.6 367 63.5
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 3.7e-128 462.2 328 69.2
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.1e-127 459.1 370 60.8
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.4e-124 450.3 423 57.7
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.4e-124 450.3 358 61.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.9e-124 449.9 287 75.3
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 4.7e-123 445.3 363 61.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.3e-122 443.0 289 75.8
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 9.7e-121 437.6 312 70.2
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.4e-119 433.0 274 78.8
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.5e-118 430.3 289 74.4
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.0e-114 417.5 275 74.5
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.1e-111 407.5 303 71.0
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.4e-111 406.4 313 64.9
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 8.3e-104 381.3 373 54.7
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.1e-103 380.9 353 55.8
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 3.8e-101 372.5 352 54.5
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 6.8e-98 361.7 258 69.8
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 4.4e-97 359.0 268 67.5
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.0e-94 350.1 328 57.9
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.0e-90 337.8 268 62.3
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 8.6e-85 318.2 356 48.6
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 4.7e-83 312.4 312 51.3
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.4e-71 274.2 452 38.1
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-65 253.1 361 44.3
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 6.4e-56 222.2 354 39.0
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-54 217.2 271 49.4
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-53 214.5 175 65.1
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-52 211.5 361 37.4
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 6.9e-50 202.2 210 55.2
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.9e-50 202.2 240 52.5
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 8.7e-45 185.3 180 58.9
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.4e-44 182.2 180 57.8
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.2e-43 179.1 244 48.4
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.3e-37 161.4 113 69.9
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 6.9e-26 122.5 107 60.7
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-22 110.9 204 38.7
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 3.1e-18 97.1 70 68.6
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 2.7e-14 84.0 49 77.6
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 6.1e-14 82.8 71 54.9
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 4.8e-11 73.2 199 29.1
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.6e-09 67.4 83 45.8
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.1e-07 62.0 35 80.0


User provided reference genes

Program Settings