Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 3.2e-102 375.2 198 100.0
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.9e-67 259.6 184 80.4
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 3.4e-48 195.7 218 54.6
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 1.4e-46 190.3 197 59.9
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 7.2e-46 188.0 197 56.9
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.6e-45 186.8 197 55.8
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 2.1e-45 186.4 197 56.3
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.3e-44 183.0 197 56.3
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 2.3e-44 183.0 197 56.9
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 3.3e-43 179.1 197 54.3
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.8e-42 176.0 197 54.3
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 4.8e-42 175.3 197 52.8
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 5.3e-41 171.8 197 51.8
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 5.9e-40 168.3 197 50.3
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 7.7e-40 167.9 197 51.3
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 6.5e-39 164.9 197 50.3
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 2.5e-38 162.9 197 48.7
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.5e-38 162.9 223 47.5
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.6e-37 160.2 197 50.8
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 3.6e-37 159.1 197 51.3
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 4.7e-37 158.7 197 49.2
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.0e-36 157.5 197 48.2
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.4e-36 157.1 197 46.7
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.8e-36 156.8 197 50.3
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.0e-36 156.0 216 48.6
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 3.0e-36 156.0 197 49.7
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 3.9e-36 155.6 197 48.2
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 5.1e-36 155.2 197 47.2
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 6.7e-36 154.8 197 47.2
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 1.1e-35 154.1 197 47.7
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 2.0e-35 153.3 200 51.0
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 2.0e-35 153.3 197 48.7
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 4.4e-35 152.1 205 47.8
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 2.2e-34 149.8 197 49.2
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 2.8e-34 149.4 144 55.6
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 6.3e-34 148.3 197 47.7
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 2.4e-33 146.4 144 52.8
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 2.4e-33 146.4 197 47.2
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 4.1e-33 145.6 144 52.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 5.3e-33 145.2 197 44.7
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 7.0e-33 144.8 146 56.8
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 9.1e-33 144.4 184 46.2
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 9.1e-33 144.4 197 44.7
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 3.5e-32 142.5 144 52.8
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 4.5e-32 142.1 144 53.5
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 4.5e-32 142.1 147 51.7
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 5.9e-32 141.7 143 59.4
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 5.9e-32 141.7 155 50.3
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 5.9e-32 141.7 183 45.4
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 1.0e-31 141.0 144 52.8
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.7e-31 140.2 197 46.2
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.2e-31 139.8 201 45.8
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 5.0e-31 138.7 144 53.5
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 2.5e-30 136.3 197 44.7
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.1e-29 131.7 197 44.2
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.1e-29 131.7 197 44.2
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 6.1e-29 131.7 197 44.2
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 2.3e-28 129.8 195 41.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 6.7e-28 128.3 197 43.1
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 8.8e-28 127.9 197 44.2
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 4.4e-27 125.6 197 43.7
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 7.5e-27 124.8 197 43.7
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 9.7e-27 124.4 149 46.3
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.7e-26 123.6 147 46.9
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 2.2e-26 123.2 172 43.6
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 3.7e-26 122.5 107 60.7
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 4.8e-26 122.1 197 42.1
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 4.5e-24 115.5 147 46.3
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 8.5e-23 111.3 119 49.6
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 5.5e-22 108.6 197 40.1
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.2e-22 108.2 176 41.5
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 9.4e-22 107.8 197 39.1
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.6e-21 107.1 118 48.3
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.4e-20 104.0 161 42.2
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 6.8e-20 101.7 161 41.6
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 2.0e-19 100.1 98 56.1
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 2.0e-19 100.1 112 51.8
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.7e-18 97.1 138 44.9
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 3.1e-17 92.8 119 47.1
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.1e-17 92.8 130 44.6
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 1.2e-16 90.9 149 41.6
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 5.9e-16 88.6 168 37.5
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.7e-15 87.0 74 62.2
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.2e-15 86.7 130 43.1
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.2e-15 86.7 168 38.1
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.5e-15 85.1 99 45.5
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 2.1e-13 80.1 119 42.9
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 3.6e-13 79.3 109 42.2
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.6e-13 79.3 89 48.3
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.7e-13 79.0 84 47.6
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 8.8e-12 74.7 113 38.9
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 5.7e-11 72.0 107 43.0
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 7.5e-11 71.6 93 49.5
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 3.7e-10 69.3 211 31.3
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.8e-09 67.0 120 38.3
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 1.8e-09 67.0 114 38.6
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 5.0e-07 58.9 61 49.2
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 6.6e-07 58.5 65 46.2
Hund21547 Selenicereus undatus HOM05D007451 ORTHO05D009399 6.6e-07 58.5 144 33.3
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 8.6e-07 58.2 137 29.9
BcaC02g11526 Brassica carinata HOM05D007451 ORTHO05D009399 8.6e-07 58.2 60 50.0


User provided reference genes

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