Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.8e-97 358.2 190 100.0
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.2e-71 273.5 265 61.9
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.3e-57 226.9 226 62.8
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.0e-57 225.7 263 56.3
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.5e-56 222.6 226 62.8
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 8.1e-55 217.6 240 57.1
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 4.0e-54 215.3 263 52.9
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 1.0e-49 200.7 290 48.6
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 1.3e-49 200.3 256 51.2
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 1.7e-49 199.9 258 51.9
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 2.2e-44 183.0 262 48.9
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 4.2e-43 178.7 305 45.9
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 3.5e-42 175.6 280 45.4
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 6.7e-41 171.4 258 48.8
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 5.6e-40 168.3 242 47.9
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 9.6e-40 167.5 261 46.4
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 4.8e-39 165.2 266 44.7
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 1.8e-38 163.3 260 46.2
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.2e-37 160.6 246 48.8
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.0e-37 159.8 257 45.9
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 5.8e-37 158.3 261 44.4
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.1e-35 154.1 261 43.7
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 1.1e-35 154.1 253 46.2
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.9e-35 153.3 251 47.4
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 2.5e-35 152.9 257 45.1
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 5.5e-35 151.8 259 43.2
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 1.2e-34 150.6 263 45.2
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 2.1e-34 149.8 273 43.6
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 7.9e-34 147.9 259 45.2
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 1.3e-33 147.1 251 46.6
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 2.3e-33 146.4 259 44.4
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 3.0e-33 146.0 262 42.0
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 3.9e-33 145.6 241 43.6
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 5.1e-33 145.2 255 43.1
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 6.7e-33 144.8 264 43.2
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.5e-32 143.7 262 42.7
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 2.5e-32 142.9 266 42.9
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 3.3e-32 142.5 258 44.6
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 3.3e-32 142.5 267 43.4
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 4.3e-32 142.1 254 44.1
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 4.3e-32 142.1 252 41.3
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 5.7e-32 141.7 261 41.4
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 9.6e-32 141.0 260 42.3
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 9.6e-32 141.0 260 42.3
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 9.6e-32 141.0 260 42.3
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 1.3e-31 140.6 268 40.7
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 1.3e-31 140.6 251 43.0
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.6e-31 140.2 264 43.2
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 2.1e-31 139.8 265 41.1
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 2.1e-31 139.8 262 44.7
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.8e-31 139.4 243 43.2
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 3.7e-31 139.0 267 41.9
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 3.7e-31 139.0 267 41.9
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 6.3e-31 138.3 266 41.7
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 6.3e-31 138.3 246 44.3
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 6.3e-31 138.3 266 43.6
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 8.2e-31 137.9 253 45.8
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.1e-30 137.5 159 54.1
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 1.4e-30 137.1 258 43.0
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 1.8e-30 136.7 260 40.4
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 3.1e-30 136.0 259 43.2
CSS0008617 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.1e-30 136.0 125 65.6
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 4.1e-30 135.6 253 44.7
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 5.3e-30 135.2 254 42.9
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 9.0e-30 134.4 257 40.5
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 2.0e-29 133.3 254 43.3
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 3.4e-29 132.5 253 44.3
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 3.4e-29 132.5 170 50.6
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 4.5e-29 132.1 269 42.4
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 5.9e-29 131.7 262 40.8
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 5.9e-29 131.7 263 42.2
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 7.6e-29 131.3 262 41.6
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 1.3e-28 130.6 310 38.1
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 1.3e-28 130.6 281 39.1
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 1.3e-28 130.6 261 42.9
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 2.9e-28 129.4 230 45.2
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.8e-28 129.0 247 43.7
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.8e-28 129.0 247 43.7
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.8e-28 129.0 248 44.0
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.8e-28 129.0 248 44.0
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 8.4e-28 127.9 268 41.8
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 1.1e-27 127.5 263 42.2
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 1.4e-27 127.1 257 43.6
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 1.4e-27 127.1 247 42.5
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.4e-27 127.1 246 42.7
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 1.9e-27 126.7 234 44.0
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 2.5e-27 126.3 233 42.9
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 4.2e-27 125.6 251 43.0
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 5.5e-27 125.2 246 40.7
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 7.2e-27 124.8 243 40.7
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 9.3e-27 124.4 244 40.2
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 9.3e-27 124.4 243 42.4
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 2.1e-26 123.2 245 41.6
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.1e-26 123.2 245 43.3
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.1e-26 123.2 245 41.6
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.7e-26 122.9 245 43.3
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 2.7e-26 122.9 239 42.7
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.5e-26 122.5 252 38.9
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 3.5e-26 122.5 234 41.0
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 3.5e-26 122.5 239 43.1
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 4.6e-26 122.1 258 39.9
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 4.6e-26 122.1 232 41.4
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 4.6e-26 122.1 233 42.5
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 6.1e-26 121.7 257 42.0
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 6.1e-26 121.7 258 38.8
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 6.1e-26 121.7 255 38.4
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 7.9e-26 121.3 204 44.6
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 1.0e-25 120.9 257 41.6
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 1.3e-25 120.6 262 37.0
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.3e-25 119.8 249 41.4
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 3.0e-25 119.4 240 42.5
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 5.1e-25 118.6 233 40.8
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 5.1e-25 118.6 233 40.8
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 5.1e-25 118.6 259 37.8
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 8.7e-25 117.9 246 39.4
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.1e-24 117.5 257 38.5
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 1.1e-24 117.5 256 39.1
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 1.9e-24 116.7 258 38.8
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 2.5e-24 116.3 257 38.5
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 2.5e-24 116.3 262 37.8
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 7.4e-24 114.8 234 40.6
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 1.3e-23 114.0 240 40.4
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 1.3e-23 114.0 240 40.4
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 1.3e-23 114.0 244 40.2
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 1.6e-23 113.6 225 40.9
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 2.2e-23 113.2 233 38.6
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 2.2e-23 113.2 266 39.8
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.7e-23 112.5 266 37.2
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 4.8e-23 112.1 263 36.5
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 4.8e-23 112.1 233 39.5
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 6.3e-23 111.7 211 41.7
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 8.2e-23 111.3 264 37.1
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 1.1e-22 110.9 259 37.1
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 1.8e-22 110.2 242 41.3
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 3.1e-22 109.4 216 38.9
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 3.1e-22 109.4 246 39.0
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 5.3e-22 108.6 243 36.6
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 5.3e-22 108.6 259 37.1
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 6.9e-22 108.2 270 37.4
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 1.2e-21 107.5 246 39.4
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 2.6e-21 106.3 249 38.2
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 3.4e-21 105.9 199 39.2
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 7.7e-21 104.8 215 37.2
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.0e-20 104.4 233 37.8
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 1.3e-20 104.0 211 39.8
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 3.8e-20 102.4 241 38.6
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 1.1e-19 100.9 170 42.9
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 1.9e-19 100.1 176 42.6
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.9e-19 100.1 240 38.3
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 3.2e-19 99.4 243 37.0
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 4.2e-19 99.0 230 34.8
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.2e-18 97.4 219 40.2
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 1.2e-18 97.4 280 35.0
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.6e-18 97.1 230 35.2
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 1.6e-18 97.1 241 37.3
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.1e-18 96.7 229 36.7
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 2.7e-18 96.3 186 39.8
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 3.6e-18 95.9 246 37.4
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 4.6e-18 95.5 208 39.4
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 7.9e-18 94.7 162 42.0
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.0e-17 94.4 240 37.1
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 3.9e-17 92.4 237 35.9
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.8e-15 86.3 206 40.8
unitig_26.g8909 Utricularia gibba HOM05D003503 ORTHO05D003885 6.3e-15 85.1 142 48.6
Actinidia09377 Actinidia chinensis HOM05D003503 ORTHO05D003885 2.0e-13 80.1 67 67.2
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 4.5e-13 79.0 236 36.9
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.9e-11 73.6 50 76.0
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 1.6e-10 70.5 213 35.7
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 1.8e-09 67.0 165 32.1
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 3.9e-09 65.9 50 68.0
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 3.9e-09 65.9 135 35.6
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 1.5e-08 63.9 85 45.9
PGR031G3517 Punica granatum HOM05D003503 ORTHO05D003885 1.5e-08 63.9 59 59.3
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 4.8e-07 58.9 147 34.0
CDE05G1889 Ceratophyllum demersum HOM05D003503 ORTHO05D003885 2.4e-06 56.6 72 51.4
C04p28750 Brassica napus HOM05D003503 ORTHO05D003885 4.1e-06 55.8 47 59.6
MBI01_g36437_MAGBIO Magnolia biondii HOM05D003503 ORTHO05D003885 5.3e-06 55.5 168 34.5


User provided reference genes

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