Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.2e-138 496.5 254 100.0
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 1.7e-100 369.8 254 73.2
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 9.7e-96 354.0 254 70.5
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 2.0e-88 329.7 256 68.8
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 1.6e-82 310.1 373 49.6
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 5.2e-81 305.1 259 60.6
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 2.0e-80 303.1 254 61.8
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 5.5e-75 285.0 256 59.0
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 3.6e-74 282.3 257 59.9
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 8.0e-74 281.2 252 57.9
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 4.4e-72 275.4 258 58.5
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 9.8e-72 274.2 255 56.1
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 2.2e-71 273.1 299 53.2
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 4.8e-71 271.9 252 56.7
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 1.1e-70 270.8 252 57.5
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 5.0e-68 261.9 255 56.9
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 2.5e-67 259.6 253 54.9
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 2.5e-67 259.6 259 54.1
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 3.2e-67 259.2 259 54.1
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.6e-66 256.9 252 53.6
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 1.6e-66 256.9 259 53.7
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.4e-65 253.8 253 55.7
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 4.0e-65 252.3 252 53.2
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 8.8e-65 251.1 256 55.5
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 2.0e-64 250.0 247 55.9
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 2.6e-64 249.6 256 57.0
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 4.4e-64 248.8 251 53.8
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.3e-63 247.3 236 57.6
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 2.8e-63 246.1 255 52.5
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 4.9e-63 245.4 263 51.3
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 8.3e-63 244.6 247 52.2
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 1.8e-62 243.4 258 49.2
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 3.1e-62 242.7 247 51.4
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.6e-61 240.4 252 51.6
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 2.7e-61 239.6 252 52.0
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 5.9e-61 238.4 247 51.8
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 5.9e-61 238.4 252 51.6
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 1.7e-60 236.9 253 53.4
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 2.3e-60 236.5 271 49.4
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 5.0e-60 235.3 258 49.6
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 6.6e-60 235.0 250 52.8
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 8.6e-60 234.6 249 51.0
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.1e-59 234.2 253 53.0
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 1.9e-59 233.4 250 50.4
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.2e-58 230.7 271 49.1
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 3.6e-58 229.2 252 50.4
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.0e-57 227.6 271 49.4
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.6e-56 223.0 271 48.3
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.6e-56 223.0 271 48.3
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.3e-55 220.7 274 49.6
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 2.9e-55 219.5 254 48.8
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 6.4e-55 218.4 243 51.9
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 4.1e-54 215.7 255 47.1
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 7.8e-53 211.5 253 47.8
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 1.7e-52 210.3 252 48.0
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 3.9e-52 209.1 256 49.2
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 2.5e-51 206.5 258 48.8
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 4.3e-51 205.7 218 52.8
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 4.3e-51 205.7 252 46.4
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.0e-49 201.1 171 56.1
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 8.9e-49 198.0 251 43.4
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 3.4e-48 196.1 155 61.9
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 7.5e-48 194.9 265 44.5
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 9.8e-48 194.5 308 40.6
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 3.7e-47 192.6 155 58.7
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.4e-46 190.7 261 43.3
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 5.4e-46 188.7 248 44.0
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 5.4e-46 188.7 171 54.4
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 1.0e-44 184.5 248 45.2
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.7e-44 183.7 170 56.5
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 2.3e-44 183.3 248 43.1
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 3.0e-44 183.0 250 44.8
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 5.0e-44 182.2 187 54.0
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 8.6e-44 181.4 270 40.0
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 1.1e-43 181.0 232 45.3
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 1.5e-43 180.6 248 42.7
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 1.9e-43 180.3 248 42.3
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 1.9e-43 180.3 249 43.4
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 1.2e-42 177.6 252 42.9
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 8.1e-42 174.9 262 40.5
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 4.0e-41 172.6 248 40.3
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 8.9e-41 171.4 248 39.9
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 8.9e-41 171.4 248 39.9
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 1.5e-40 170.6 237 41.8
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 4.9e-39 165.6 164 53.0
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 4.9e-39 165.6 251 40.2
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 6.0e-37 158.7 248 41.9
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 1.3e-36 157.5 190 47.4
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 6.8e-33 145.2 263 37.6
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 1.7e-31 140.6 104 59.6
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 2.9e-31 139.8 157 52.2
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 3.8e-31 139.4 252 38.5
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 2.4e-30 136.7 261 31.8
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.2e-30 136.3 157 50.3
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 4.1e-30 136.0 168 48.2
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 4.6e-29 132.5 265 33.6
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 1.7e-28 130.6 239 34.7
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 6.6e-28 128.6 195 35.9
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 1.5e-27 127.5 273 30.0
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 1.4e-25 120.9 265 32.5
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 5.2e-25 119.0 114 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.7e-23 114.0 238 31.5
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 3.0e-20 103.2 98 51.0
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 6.6e-20 102.1 89 53.9
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 2.7e-13 80.1 106 51.9
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 4.6e-13 79.3 79 55.7
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 7.4e-11 72.0 153 32.0
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 7.6e-08 62.0 97 35.1
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 6.4e-07 58.9 116 33.6
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 1.1e-06 58.2 152 28.9


User provided reference genes

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