Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.6e-89 332.0 168 100.0
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.5e-73 279.6 179 82.7
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.5e-73 279.6 179 82.7
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.0e-65 252.7 140 90.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 1.4e-45 186.8 120 79.2
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 6.7e-45 184.5 115 75.7
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.6e-41 172.6 115 77.4
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 7.7e-41 171.0 116 72.4
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 1.0e-37 160.6 143 57.3
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 3.1e-34 149.1 119 62.2
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 5.3e-34 148.3 117 63.2
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 1.2e-33 147.1 115 64.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 4.5e-33 145.2 115 64.3
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 5.9e-33 144.8 115 62.6
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 2.2e-32 142.9 115 58.3
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 8.5e-32 141.0 115 60.9
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 4.2e-31 138.7 115 60.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 4.2e-31 138.7 115 57.4
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 5.5e-31 138.3 115 59.1
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 5.5e-31 138.3 115 60.9
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 7.2e-31 137.9 115 62.6
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.6e-30 136.7 115 60.0
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.6e-30 136.7 115 59.1
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.1e-30 136.3 116 57.8
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 3.6e-30 135.6 120 61.7
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 4.7e-30 135.2 116 58.6
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 6.1e-30 134.8 115 56.5
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 8.0e-30 134.4 115 56.5
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 8.0e-30 134.4 117 59.0
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 5.2e-29 131.7 116 57.8
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 8.8e-29 131.0 115 55.7
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.2e-28 130.6 116 56.0
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 3.4e-28 129.0 117 55.6
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 3.4e-28 129.0 115 55.7
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 7.5e-28 127.9 115 55.7
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 7.5e-28 127.9 116 55.2
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.7e-27 126.7 115 54.8
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 2.2e-27 126.3 116 55.2
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 2.8e-27 125.9 116 53.4
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 3.7e-27 125.6 117 52.1
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 8.3e-27 124.4 116 55.2
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.4e-26 123.6 116 53.4
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 1.8e-26 123.2 116 52.6
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 2.4e-26 122.9 116 55.2
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 2.4e-26 122.9 89 66.3
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.4e-26 122.9 116 55.2
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 3.1e-26 122.5 115 58.3
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 4.1e-26 122.1 114 54.4
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.1e-26 122.1 114 54.4
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 7.0e-26 121.3 124 48.4
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 7.0e-26 121.3 117 53.0
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 7.0e-26 121.3 116 55.2
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 9.1e-26 120.9 117 52.1
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 1.2e-25 120.6 115 53.9
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 1.2e-25 120.6 116 56.0
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.6e-25 120.2 113 54.0
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.0e-25 119.8 115 55.7
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.7e-25 119.4 116 54.3
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 2.7e-25 119.4 113 54.0
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 2.7e-25 119.4 116 55.2
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.5e-25 118.6 113 53.1
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.7e-24 116.7 114 53.5
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 3.8e-24 115.5 113 51.3
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 8.5e-24 114.4 116 53.4
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.5e-23 113.6 115 52.2
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.5e-23 113.6 119 51.3
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.5e-23 112.8 115 51.3
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 5.5e-23 111.7 118 48.3
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 5.5e-23 111.7 116 51.7
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 5.5e-23 111.7 118 51.7
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 5.5e-23 111.7 118 51.7
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 2.7e-22 109.4 126 42.9
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 3.6e-22 109.0 115 49.6
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 6.1e-22 108.2 106 52.8
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 2.3e-21 106.3 121 47.9
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 5.2e-21 105.1 121 47.1
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 5.2e-21 105.1 119 47.9
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 1.2e-20 104.0 113 48.7
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.5e-20 103.6 84 56.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 1.5e-20 103.6 115 53.0
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 1.5e-20 103.6 83 63.9
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 3.4e-20 102.4 98 48.0
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 7.5e-20 101.3 116 51.7
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 9.8e-20 100.9 118 46.6
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 6.3e-19 98.2 122 45.1
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 8.3e-19 97.8 77 61.0
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-18 97.1 116 48.3
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-18 97.1 116 48.3
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 1.4e-18 97.1 116 48.3
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 5.4e-18 95.1 116 46.6
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 9.2e-18 94.4 66 71.2
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 9.2e-18 94.4 119 46.2
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 9.2e-18 94.4 119 46.2
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.3e-16 90.5 118 42.4
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 2.9e-16 89.4 115 41.7
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.8e-16 89.0 116 43.1
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.5e-12 77.0 117 38.5
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.3e-11 73.9 93 45.2
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 3.5e-09 65.9 67 49.3
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 8.6e-08 61.2 112 37.5
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.5e-07 60.5 115 33.0


User provided reference genes

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