Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 7.0e-26 119.8 58 100.0
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.2e-17 92.4 45 91.1
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.6e-17 92.0 45 95.6
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 2.0e-17 91.7 45 93.3
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 4.6e-17 90.5 45 93.3
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 7.8e-17 89.7 45 91.1
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 7.8e-17 89.7 45 93.3
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 7.8e-17 89.7 45 91.1
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.0e-16 89.4 45 93.3
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.0e-16 89.4 45 93.3
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.3e-16 89.0 45 91.1
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.3e-16 89.0 45 91.1
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 1.3e-16 89.0 44 93.2
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 1.3e-16 89.0 45 91.1
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.7e-16 88.6 45 91.1
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.7e-16 88.6 45 91.1
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.7e-16 88.6 45 91.1
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.7e-16 88.6 45 91.1
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.7e-16 88.6 45 91.1
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.7e-16 88.6 44 90.9
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 1.7e-16 88.6 45 88.9
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.3e-16 88.2 45 88.9
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.3e-16 88.2 45 88.9
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.3e-16 88.2 45 88.9
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 2.3e-16 88.2 45 88.9
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 2.3e-16 88.2 45 88.9
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 91.1
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 91.1
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 91.1
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 91.1
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 86.7
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 86.7
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 86.7
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 91.1
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 91.1
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 86.7
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 86.7
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 3.0e-16 87.8 45 88.9
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.9e-16 87.4 45 84.4
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 88.9
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 88.9
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 88.9
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 88.9
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 88.9
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 88.9
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 5.0e-16 87.0 45 86.7
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 6.6e-16 86.7 45 88.9
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 6.6e-16 86.7 45 88.9
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 6.6e-16 86.7 45 86.7
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 8.6e-16 86.3 45 88.9
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 8.6e-16 86.3 45 86.7
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 8.6e-16 86.3 45 86.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 8.6e-16 86.3 45 86.7
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.1e-15 85.9 45 88.9
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 84.4
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 86.7
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 86.7
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 88.9
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.1e-15 85.9 45 84.4
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.5e-15 85.5 45 88.9
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 1.5e-15 85.5 45 88.9
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.5e-15 85.5 45 84.4
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.5e-15 85.5 45 88.9
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.5e-15 85.5 45 88.9
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.9e-15 85.1 55 74.5
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.9e-15 85.1 45 86.7
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.9e-15 85.1 45 86.7
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 2.5e-15 84.7 45 86.7
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 3.3e-15 84.3 45 88.9
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 3.3e-15 84.3 45 84.4
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 3.3e-15 84.3 45 88.9
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.3e-15 84.3 45 86.7
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 4.3e-15 84.0 45 84.4
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 4.3e-15 84.0 45 86.7
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.3e-15 84.0 45 86.7
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 4.3e-15 84.0 45 86.7
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 5.6e-15 83.6 45 84.4
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 7.3e-15 83.2 45 86.7
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 9.5e-15 82.8 45 86.7
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 9.5e-15 82.8 45 86.7
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.2e-14 82.4 42 88.1
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.2e-14 82.4 45 86.7
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.6e-14 82.0 43 90.7
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.6e-14 82.0 45 84.4
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 2.1e-14 81.6 45 82.2
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 3.6e-14 80.9 45 84.4
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 4.7e-14 80.5 45 82.2
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.7e-14 80.5 45 80.0
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 6.2e-14 80.1 45 84.4
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 8.1e-14 79.7 45 77.8
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.4e-13 79.0 45 77.8
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.8e-13 78.6 43 83.7
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.8e-13 78.6 43 83.7
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.8e-13 78.6 43 86.0
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.5e-12 75.5 45 75.6
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 4.4e-12 73.9 45 75.6
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 7.5e-12 73.2 37 89.2
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.2e-11 71.6 45 73.3
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 4.1e-10 67.4 45 66.7
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 5.4e-10 67.0 45 66.7
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 5.4e-10 67.0 45 66.7
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 5.4e-10 67.0 45 71.1
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.5e-09 64.3 45 62.2


User provided reference genes

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