Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 5.9e-46 187.2 96 100.0
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 5.9e-46 187.2 96 100.0
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 7.8e-30 133.7 91 78.0
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 2.0e-25 119.0 100 65.0
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 5.8e-25 117.5 97 71.1
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 2.2e-24 115.5 92 70.7
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 2.9e-24 115.2 95 68.4
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 4.9e-24 114.4 93 67.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 6.4e-24 114.0 94 68.1
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.1e-23 111.3 92 71.7
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.2e-22 109.8 90 71.1
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.2e-22 109.8 90 71.1
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.1e-22 109.0 102 64.7
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.7e-22 108.6 90 68.9
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.7e-22 108.6 90 68.9
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.3e-21 106.3 93 63.4
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.3e-21 106.3 91 69.2
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.7e-21 105.9 94 66.0
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.7e-21 105.9 97 64.9
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 2.3e-21 105.5 99 60.6
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.3e-21 105.5 92 67.4
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 3.9e-21 104.8 93 63.4
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 8.6e-21 103.6 97 64.9
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.1e-20 103.2 93 63.4
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 1.9e-20 102.4 94 64.9
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 2.5e-20 102.1 90 66.7
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 2.5e-20 102.1 94 64.9
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 2.5e-20 102.1 88 68.2
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 2.5e-20 102.1 88 68.2
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 2.5e-20 102.1 93 62.4
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 3.3e-20 101.7 92 60.9
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 3.3e-20 101.7 91 63.7
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.3e-20 101.7 96 62.5
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.3e-20 101.7 96 62.5
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 4.3e-20 101.3 95 60.0
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 5.6e-20 100.9 96 62.5
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 7.3e-20 100.5 95 63.2
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 7.3e-20 100.5 92 59.8
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 7.3e-20 100.5 88 67.0
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 9.5e-20 100.1 92 59.8
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.8e-19 98.6 92 57.6
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.8e-19 98.6 92 57.6
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 2.8e-19 98.6 92 57.6
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.6e-19 98.2 91 64.8
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 1.1e-18 96.7 92 59.8
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.4e-18 96.3 92 59.8
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.4e-18 96.3 92 60.9
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.3e-18 95.5 93 57.0
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 3.1e-18 95.1 94 59.6
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 3.1e-18 95.1 93 60.2
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 4.0e-18 94.7 92 58.7
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 5.2e-18 94.4 96 56.2
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 5.2e-18 94.4 83 65.1
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 5.2e-18 94.4 95 55.8
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 6.8e-18 94.0 90 56.7
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.2e-17 93.2 88 63.6
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.5e-17 92.8 94 59.6
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.5e-17 92.8 96 57.3
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 2.6e-17 92.0 92 58.7
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 1.3e-16 89.7 94 57.4
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 1.7e-16 89.4 60 85.0
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 4.9e-16 87.8 95 56.8
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 4.9e-16 87.8 94 58.5
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 6.4e-16 87.4 67 74.6
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 8.3e-16 87.0 90 50.0
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 2.4e-15 85.5 92 54.3
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 4.1e-15 84.7 85 57.6
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 4.1e-15 84.7 104 52.9
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.6e-14 82.8 83 60.2
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.0e-13 80.1 93 53.8
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.3e-13 79.7 67 68.7
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 3.0e-13 78.6 66 66.7
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 3.6e-11 71.6 83 51.8
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.8e-10 69.3 102 48.0
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 4.0e-10 68.2 50 74.0
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 1.9e-07 59.3 87 44.8
TAR376G0716 Trochodendron aralioides HOM05D007889 ORTHO05D009987 9.3e-07 57.0 96 37.5
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 1.2e-06 56.6 86 43.0
Migut.H02288 Erythranthe guttata HOM05D007889 ORTHO05D009987 1.6e-06 56.2 83 44.6


User provided reference genes

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