Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045650 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 3.9e-176 621.3 308 100.0
CSS0038357 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.4e-101 373.6 307 64.5
CSS0012058 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.6e-92 343.6 310 60.3
CSS0011870 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 3.7e-73 279.3 275 59.3
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 3.8e-70 269.2 220 65.9
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 8.8e-67 258.1 220 64.1
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 5.3e-56 222.2 183 66.7
CSS0024381 Camellia sinensis var. sinensis HOM05D000734 ORTHO05D002223 4.0e-27 126.3 71 84.5
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 9.8e-18 95.1 102 46.1
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 6.4e-17 92.4 98 45.9
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 8.3e-17 92.0 98 45.9
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 8.3e-17 92.0 98 45.9
CSS0031951 Camellia sinensis var. sinensis HOM05D000517 ORTHO05D000751 2.3e-14 84.0 131 42.0
Rhsim05G0128200 Rhododendron simsii HOM05D001436 ORTHO05D000880 3.9e-14 83.2 141 36.9
Lj6P789T46 Lonicera japonica HOM05D001436 ORTHO05D000880 6.2e-12 75.9 94 41.5
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 8.9e-11 72.0 79 40.5
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 3.4e-10 70.1 72 47.2
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 9.9e-10 68.6 64 48.4
MBI08_g16117_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-09 67.8 215 23.7
MBI15_g02577_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-09 67.8 107 31.8
Oeu014351.1 Olea europaea HOM05D000047 ORTHO05D000044 1.7e-09 67.8 78 39.7
MBI07_g32587_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.7e-09 66.6 65 46.2
QL08p033351 Quercus lobata HOM05D001934 ORTHO05D002139 3.7e-09 66.6 101 34.7
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 6.4e-09 65.9 67 46.3
Oeu022312.1 Olea europaea HOM05D000047 ORTHO05D000044 6.4e-09 65.9 79 40.5
Oeu018352.1 Olea europaea HOM05D003069 ORTHO05D000880 1.1e-08 65.1 63 46.0
MBI05_g32032_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.4e-08 64.7 136 29.4
MBI15_g19418_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.9e-08 64.3 186 27.4
Oeu003844.1 Olea europaea HOM05D001436 ORTHO05D000880 1.9e-08 64.3 63 47.6
CSS0021006 Camellia sinensis var. sinensis HOM05D000517 ORTHO05D000751 3.2e-08 63.5 63 54.0
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 4.1e-08 63.2 92 35.9
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 5.4e-08 62.8 79 36.7
Oeu033343.1 Olea europaea HOM05D001436 ORTHO05D000880 9.2e-08 62.0 63 46.0
MBI17_g26637_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.2e-07 61.6 138 28.3
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 1.2e-07 61.6 71 40.8
AUR62034883 Chenopodium quinoa HOM05D009849 ORTHO05D012324 1.6e-07 61.2 78 38.5
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 1.6e-07 61.2 73 37.0
Cfa005197 Carpinus fangiana HOM05D001375 ORTHO05D001222 2.7e-07 60.5 103 35.0
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 2.7e-07 60.5 92 33.7
Oeu059272.1 Olea europaea HOM05D011569 ORTHO05D000880 3.5e-07 60.1 89 36.0
Haze_05880 Corylus avellana HOM05D043714 ORTHO05D000880 6.0e-07 59.3 118 30.5
MBI10_g32341_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.8e-07 58.9 64 45.3
MBI14_g08687_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.0e-06 58.5 63 38.1
MBI18_g31595_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.0e-06 58.5 65 43.1
MBI17_g43984_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-06 57.8 138 27.5
MBI18_g39969_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-06 57.8 94 34.0
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 1.7e-06 57.8 65 40.0
MBI01_g07127_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.3e-06 57.4 81 39.5
MBI01_g48011_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.3e-06 57.4 65 43.1
MBI01_g37950_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.0e-06 57.0 63 42.9
MBI11_g41301_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.0e-06 57.0 72 41.7
MBI16_g25487_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.9e-06 56.6 63 34.9
MBI16_g26216_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.9e-06 56.6 74 40.5
MBI18_g11469_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.6e-06 55.8 99 32.3
MBI18_g41471_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.6e-06 55.8 63 39.7
MBI08_g23489_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 8.6e-06 55.5 68 38.2
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 8.6e-06 55.5 50 46.0
Oeu015972.1 Olea europaea HOM05D001436 ORTHO05D000880 8.6e-06 55.5 62 43.5
SGA_v2.0_scaffold245G44675 Striga asiatica HOM05D000429 ORTHO05D002449 8.6e-06 55.5 63 41.3
TWI38G1939 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.6e-06 55.5 92 35.9


User provided reference genes

Program Settings