Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 6.9e-251 870.2 435 100.0
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 7.0e-211 737.3 435 83.7
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.3e-209 733.0 438 83.1
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 5.2e-206 721.1 429 83.4
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 2.0e-205 719.2 431 81.0
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 2.0e-205 719.2 435 80.2
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 2.6e-205 718.8 429 79.7
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.8e-203 712.6 429 81.8
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 3.1e-203 711.8 430 80.0
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 1.3e-201 706.4 429 81.6
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 3.8e-201 704.9 429 81.1
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.5e-200 703.0 427 78.5
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 1.2e-199 699.9 434 81.1
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 2.7e-199 698.7 429 80.0
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 6.1e-199 697.6 425 80.5
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 6.8e-198 694.1 432 77.3
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.2e-197 693.3 429 77.4
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 3.4e-197 691.8 429 76.9
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 7.5e-197 690.6 433 79.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 1.7e-196 689.5 431 78.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 2.8e-196 688.7 429 79.7
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 3.7e-196 688.3 425 80.2
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 8.3e-196 687.2 429 79.3
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.1e-195 686.8 429 79.3
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 2.4e-195 685.6 429 79.0
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.1e-195 684.9 429 79.3
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 5.9e-194 681.0 437 78.3
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.0e-193 680.2 429 78.8
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 1.3e-193 679.9 429 76.2
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 1.7e-193 679.5 429 78.8
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.3e-193 679.1 429 78.6
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 1.5e-192 676.4 429 76.7
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.3e-192 675.2 429 78.3
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 3.3e-192 675.2 431 77.3
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.3e-190 669.1 429 75.3
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 2.3e-190 669.1 430 77.4
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 2.6e-189 665.6 434 77.2
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 3.4e-189 665.2 431 75.6
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 9.8e-189 663.7 429 76.9
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.4e-187 659.8 406 81.5
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 3.1e-187 658.7 430 76.5
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 5.4e-187 657.9 431 76.8
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 9.2e-187 657.1 432 77.3
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.6e-186 656.4 429 75.8
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 2.7e-186 655.6 429 75.3
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 2.7e-186 655.6 429 76.5
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 4.5e-186 654.8 433 74.4
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.9e-184 649.4 429 74.6
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.6e-183 646.4 416 75.2
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.0e-182 643.7 434 73.0
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.4e-182 643.3 427 78.5
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 2.0e-181 639.4 454 71.4
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.0e-181 639.4 433 73.4
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 2.6e-181 639.0 435 73.3
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 5.8e-181 637.9 435 72.6
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.3e-180 636.7 434 72.6
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 8.3e-180 634.0 431 74.9
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 5.0e-177 624.8 430 70.0
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 7.3e-176 620.9 436 73.4
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 2.8e-175 619.0 449 67.3
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.8e-175 619.0 442 70.4
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 8.0e-175 617.5 440 74.1
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.1e-174 617.1 430 69.8
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 4.0e-174 615.1 431 70.3
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 8.9e-174 614.0 351 85.2
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 5.8e-173 611.3 432 71.5
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 2.8e-167 592.4 429 67.8
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 2.3e-166 589.3 412 75.2
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 3.1e-166 589.0 434 68.0
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.2e-165 587.0 431 70.3
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 2.9e-164 582.4 384 77.6
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 1.1e-163 580.5 387 74.7
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.4e-163 580.1 431 65.0
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 1.2e-162 577.0 441 67.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.7e-161 573.2 430 66.5
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.7e-161 573.2 430 63.3
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 2.3e-161 572.8 429 65.0
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 3.9e-161 572.0 430 63.3
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.5e-160 570.1 430 63.5
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 2.1e-159 566.2 412 72.1
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 3.6e-159 565.5 430 64.2
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 3.6e-159 565.5 329 82.7
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 4.7e-159 565.1 462 63.9
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 5.2e-158 561.6 431 64.5
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 5.2e-158 561.6 430 63.0
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 6.8e-158 561.2 417 63.3
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 6.8e-158 561.2 416 72.4
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 7.6e-157 557.8 418 63.6
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 1.7e-156 556.6 429 62.7
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 1.2e-154 550.4 439 62.4
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 2.7e-154 549.3 430 61.4
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.4e-150 536.2 427 64.4
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.7e-148 530.0 407 66.3
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 3.0e-145 519.2 419 64.2
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 2.5e-144 516.2 401 61.8
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.6e-144 515.0 430 59.3
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 9.0e-142 507.7 419 61.6
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.0e-141 506.5 404 64.1
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 6.4e-140 501.5 404 61.9
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.0e-132 477.6 329 72.0
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 7.4e-120 434.9 264 79.2
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 5.5e-115 418.7 305 70.8
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 4.3e-112 409.1 429 52.9
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 9.1e-102 374.8 399 48.9
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 5.0e-100 369.0 399 51.4
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 2.6e-93 346.7 218 72.5
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 7.2e-91 338.6 425 45.2
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 9.8e-88 328.2 320 55.3
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.5e-85 319.3 215 70.2
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 3.6e-82 309.7 306 52.3
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 8.0e-82 308.5 410 44.9
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.0e-64 250.8 167 69.5
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 1.2e-58 231.5 135 76.3
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 2.6e-56 223.8 157 70.1
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 1.1e-54 218.4 130 77.7
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.1e-49 200.3 223 47.1
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 8.4e-47 192.2 127 73.2
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.9e-46 191.0 127 73.2
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 4.0e-41 173.3 98 78.6
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.3e-34 151.8 82 90.2
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 1.7e-31 141.4 134 56.7
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.2e-29 135.2 92 79.3
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 2.3e-28 131.0 120 60.0
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 5.6e-19 99.8 103 54.4
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 3.2e-14 84.0 53 64.2
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.7e-10 70.5 53 56.6
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 7.2e-06 56.2 53 60.4


User provided reference genes

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