Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011198 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 8.0e-82 307.0 149 100.0
CSS0045627 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 8.0e-82 307.0 149 100.0
CSS0026798 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 1.4e-70 269.6 153 86.3
CSS0022918 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 2.1e-66 255.8 149 84.6
CSS0028275 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 3.6e-66 255.0 153 84.3
CSS0042389 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 3.6e-66 255.0 153 84.3
CSS0002699 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 1.5e-59 233.0 153 79.7
CSS0024020 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 2.3e-57 225.7 153 76.5
CSS0037146 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 2.3e-57 225.7 153 76.5
Hma1.2p1_0173F.1_g076480 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.3e-17 91.7 161 38.5
Actinidia02505 Actinidia chinensis HOM05D012492 ORTHO05D013377 6.9e-17 91.3 102 53.9
Actinidia09056 Actinidia chinensis HOM05D012492 ORTHO05D013377 9.9e-16 87.4 113 50.4
Hma1.2p1_1929F.1_g307880 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-14 84.0 115 46.1
Hma1.2p1_0264F.1_g106190 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-13 80.1 117 45.3
Hund01717 Selenicereus undatus HOM05D012356 ORTHO05D013377 1.8e-12 76.6 116 41.4
Hma1.2p1_1417F.1_g282210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.7e-12 74.3 124 41.1
Hma1.2p1_0231F.1_g097616 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-11 72.0 121 41.3
Hma1.2p1_0231F.1_g097540 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.6e-11 71.6 121 41.3
Hma1.2p1_1838F.1_g304830 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.4e-11 71.2 124 39.5
QL10p044694 Quercus lobata HOM05D000023 ORTHO05D000014 6.2e-10 68.2 80 48.8
Hma1.2p1_1536F.1_g289510 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.1e-10 67.8 82 46.3
Hma1.2p1_0793F.1_g218611 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-09 67.4 73 49.3
Hma1.2p1_0754F.1_g213020 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.4e-09 67.0 68 50.0
arahy.Tifrunner.gnm1.ann1.JN0RSR Arachis hypogaea HOM05D000023 ORTHO05D000014 1.8e-09 66.6 88 45.5
Hma1.2p1_2905F.1_g330090 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.8e-09 66.6 68 50.0
QL01p014593 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-09 65.9 80 47.5
QL03p015897 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-09 65.9 80 47.5
QL05p035277 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-09 65.9 80 47.5
QL05p083223 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-09 65.9 80 47.5
QL10p062599 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-09 65.9 80 47.5
arahy.Tifrunner.gnm1.ann1.R0G8AX Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-07 60.5 105 36.2
QL04p034646 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-07 60.5 108 41.7
QL06p021593 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-07 60.5 108 41.7
QL11p012181 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-07 60.5 108 41.7
QL93p0205_0182 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-07 60.5 108 41.7
QL04p025253 Quercus lobata HOM05D012492 ORTHO05D013377 2.2e-07 59.7 108 41.7
QL05p042564 Quercus lobata HOM05D000023 ORTHO05D000014 2.2e-07 59.7 108 41.7
SHI14770 Sapria himalayana HOM05D000023 ORTHO05D000014 3.2e-06 55.8 48 58.3
BraA01t03149Z Brassica rapa HOM05D000023 ORTHO05D000014 7.1e-06 54.7 49 61.2
arahy.Tifrunner.gnm1.ann1.SUH5RA Arachis hypogaea HOM05D000023 ORTHO05D000014 9.3e-06 54.3 159 30.8
CARHR280650 Cardamine hirsuta HOM05D000023 ORTHO05D000014 9.3e-06 54.3 47 57.4
QL10p020680 Quercus lobata HOM05D000023 ORTHO05D000014 9.3e-06 54.3 106 38.7


User provided reference genes

Program Settings