Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.6e-38 161.4 72 100.0
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.4e-36 154.8 72 94.4
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.4e-36 154.8 72 94.4
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 7.1e-36 153.3 72 93.1
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.6e-35 152.1 72 93.1
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.1e-35 151.8 72 93.1
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.3e-26 121.7 54 94.4
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 7.4e-25 116.7 57 86.0
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.3e-23 110.5 57 82.5
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 6.5e-21 103.6 62 66.1
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 6.5e-21 103.6 62 66.1
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 1.6e-16 89.0 54 68.5
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 5.3e-15 84.0 55 61.8
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.3e-15 84.0 55 63.6
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.3e-15 84.0 55 63.6
CSS0025806 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-14 82.8 57 59.6
CSS0044145 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.0e-14 82.0 55 60.0
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 2.2e-13 78.6 55 56.4
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 8.5e-13 76.6 55 54.5
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 1.1e-12 76.3 54 51.9
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 2.5e-12 75.1 56 58.9
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 2.1e-11 72.0 54 55.6
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 4.6e-11 70.9 61 50.8
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 7.9e-11 70.1 55 54.5
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 5.1e-10 67.4 48 52.1
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 2.0e-09 65.5 52 53.8
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 2.5e-09 65.1 69 47.8
HanXRQChr04g0105731 Helianthus annuus HOM05D002515 ORTHO05D002722 3.3e-09 64.7 49 53.1
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 4.3e-09 64.3 55 52.7
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 7.4e-09 63.5 56 50.0
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 1.3e-08 62.8 54 50.0
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 1.7e-08 62.4 49 55.1
ClCG04G004860 Citrullus lanatus HOM05D002515 ORTHO05D002722 2.8e-08 61.6 71 40.8
MELO3C025918.2 Cucumis melo HOM05D002515 ORTHO05D002722 2.8e-08 61.6 48 52.1
DCAR_005973 Daucus carota HOM05D002515 ORTHO05D002722 2.8e-08 61.6 54 46.3
MD04G1128800 Malus domestica HOM05D002515 ORTHO05D002722 2.8e-08 61.6 57 49.1
CsaV3_6G016870 Cucumis sativus L. HOM05D002515 ORTHO05D002722 3.7e-08 61.2 48 52.1
CANSAT54G1460 Cannabis sativa HOM05D002515 ORTHO05D002722 1.1e-07 59.7 54 50.0
Oeu054145.1 Olea europaea HOM05D002515 ORTHO05D002722 1.1e-07 59.7 54 46.3
ClCG02G020160 Citrullus lanatus HOM05D002515 ORTHO05D002722 1.4e-07 59.3 48 50.0
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.8e-07 58.9 55 43.6
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.8e-07 58.9 55 43.6
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 1.8e-07 58.9 54 48.1
Duzib168G0968 Durio zibethinus HOM05D002515 ORTHO05D002722 2.4e-07 58.5 54 44.4
PGR119G0741 Punica granatum HOM05D002515 ORTHO05D002722 2.4e-07 58.5 49 53.1
Lsat_1_v5_gn_9_23360 Lactuca sativa HOM05D002515 ORTHO05D002722 3.1e-07 58.2 63 42.9
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 3.1e-07 58.2 54 48.1
ECA247G2589 Erigeron canadensis HOM05D002515 ORTHO05D002722 4.1e-07 57.8 47 48.9
Duzib093G1384 Durio zibethinus HOM05D002515 ORTHO05D002722 5.3e-07 57.4 49 49.0
PGR004G0883 Punica granatum HOM05D002515 ORTHO05D002722 6.9e-07 57.0 67 35.8
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 9.1e-07 56.6 49 49.0
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 1.5e-06 55.8 54 48.1
Prupe.6G254700 Prunus persica HOM05D002515 ORTHO05D002722 1.5e-06 55.8 62 41.9
PGSC0003DMG400030320 Solanum tuberosum HOM05D002515 ORTHO05D002722 1.5e-06 55.8 66 31.8
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 2.0e-06 55.5 52 44.2
Lsat_1_v5_gn_8_73101 Lactuca sativa HOM05D002515 ORTHO05D002722 2.6e-06 55.1 73 41.1
CiPaw.13G094800 Carya illinoinensis HOM05D002515 ORTHO05D002722 3.4e-06 54.7 49 44.9
Manes.04G034800 Manihot esculenta HOM05D002515 ORTHO05D002722 3.4e-06 54.7 52 42.3
CsaV3_4G031780 Cucumis sativus L. HOM05D002515 ORTHO05D002722 5.9e-06 53.9 71 40.8
MD12G1141400 Malus domestica HOM05D002515 ORTHO05D002722 5.9e-06 53.9 57 45.6
Solyc06g076130.3 Solanum lycopersicum HOM05D002515 ORTHO05D002722 5.9e-06 53.9 66 31.8
Sopen06g032530 Solanum pennellii HOM05D002515 ORTHO05D002722 5.9e-06 53.9 66 31.8
Atru.chr8.1972 Acer truncatum HOM05D002515 ORTHO05D002722 7.7e-06 53.5 65 44.6
Lj3g0026583 Lotus japonicus HOM05D002515 ORTHO05D002722 7.7e-06 53.5 69 37.7
Potri.016G095500 Populus trichocarpa HOM05D002515 ORTHO05D002722 7.7e-06 53.5 54 44.4


User provided reference genes

Program Settings