Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.0e-154 550.1 281 100.0
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.8e-152 542.0 291 96.6
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.4e-126 455.3 290 80.0
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.6e-123 446.4 290 80.0
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 2.1e-123 446.0 289 79.6
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 1.0e-122 443.7 291 77.7
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 1.1e-119 433.7 277 80.5
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 9.0e-119 430.6 291 77.7
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.2e-117 426.0 291 76.3
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.4e-116 423.3 279 76.7
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.9e-116 422.9 291 76.6
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 2.5e-116 422.5 291 75.6
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 3.2e-116 422.2 289 75.1
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 7.1e-116 421.0 292 75.3
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 7.1e-116 421.0 289 75.4
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 9.3e-116 420.6 291 77.3
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 3.5e-115 418.7 289 74.4
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 7.9e-115 417.5 290 75.9
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 1.3e-114 416.8 290 74.5
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 8.7e-114 414.1 290 74.1
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 2.1e-112 409.5 290 74.5
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.8e-112 409.1 280 75.4
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 4.8e-112 408.3 290 74.1
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 8.2e-112 407.5 290 73.4
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 1.1e-111 407.1 296 72.0
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 3.1e-111 405.6 298 71.8
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 5.3e-111 404.8 281 76.2
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 1.2e-110 403.7 290 73.8
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 5.9e-110 401.4 291 71.8
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.0e-109 400.6 290 73.1
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 6.5e-109 397.9 297 70.7
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 4.2e-108 395.2 296 70.6
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 5.5e-108 394.8 290 71.4
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 5.5e-108 394.8 290 71.4
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 9.3e-108 394.0 296 72.6
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 1.2e-107 393.7 298 71.1
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.3e-106 390.2 289 71.6
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 2.3e-106 389.4 295 70.2
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 2.3e-106 389.4 290 69.3
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 3.9e-106 388.7 289 70.6
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 6.7e-106 387.9 290 70.7
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 6.7e-106 387.9 298 69.1
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 1.3e-104 383.6 290 70.0
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 1.6e-104 383.3 297 68.4
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.6e-104 383.3 288 70.8
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 2.2e-104 382.9 292 70.9
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 2.8e-104 382.5 294 69.7
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 2.8e-104 382.5 295 70.2
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.8e-104 381.7 292 70.5
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.4e-103 380.2 292 70.5
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 1.8e-103 379.8 296 66.2
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 3.1e-103 379.0 291 69.4
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.1e-103 378.6 294 70.1
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.1e-103 378.6 292 70.2
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 6.9e-103 377.9 291 69.1
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 9.1e-103 377.5 291 69.1
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.1e-103 377.5 291 69.1
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 9.1e-103 377.5 292 69.5
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.2e-102 377.1 273 72.9
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 2.0e-102 376.3 290 69.3
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.6e-102 375.9 291 68.7
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.6e-102 375.9 292 69.5
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.6e-102 375.9 292 69.5
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 4.5e-102 375.2 292 68.8
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 5.9e-102 374.8 298 69.1
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 7.7e-102 374.4 295 68.5
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-101 373.6 296 69.3
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 1.3e-101 373.6 297 68.4
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.7e-101 373.2 296 69.3
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 2.9e-101 372.5 292 69.9
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.9e-101 372.5 291 68.4
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.8e-101 372.1 292 69.2
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 5.0e-101 371.7 292 68.8
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 8.5e-101 370.9 292 68.5
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.4e-100 370.2 285 70.2
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 1.9e-100 369.8 292 68.5
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.5e-100 369.4 293 68.6
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.2e-100 369.0 293 69.6
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 3.2e-100 369.0 295 69.2
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.2e-100 368.6 293 69.3
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 4.2e-100 368.6 293 68.6
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 9.4e-100 367.5 293 68.6
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 9.4e-100 367.5 293 68.6
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 9.4e-100 367.5 293 68.3
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 9.4e-100 367.5 293 67.2
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 9.4e-100 367.5 292 68.8
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 2.7e-99 365.9 298 67.8
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 3.6e-99 365.5 293 68.3
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.6e-99 365.5 292 68.2
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 4.6e-99 365.2 294 68.4
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 7.9e-99 364.4 294 65.3
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 7.9e-99 364.4 294 68.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.0e-98 364.0 292 67.8
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 1.4e-98 363.6 294 67.0
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.4e-98 363.6 294 69.0
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.8e-98 363.2 293 67.9
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.8e-98 363.2 297 65.7
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.8e-98 363.2 293 66.2
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 2.3e-98 362.8 292 67.1
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 2.3e-98 362.8 292 67.1
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 2.3e-98 362.8 292 67.1
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.3e-98 362.8 294 67.7
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.3e-98 362.8 294 67.7
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.0e-98 362.5 294 67.7
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.0e-98 362.5 292 67.1
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 3.0e-98 362.5 292 66.8
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 3.9e-98 362.1 293 66.6
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 3.9e-98 362.1 292 66.8
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.9e-98 362.1 292 66.8
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 3.9e-98 362.1 296 66.9
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 5.1e-98 361.7 292 66.8
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 6.7e-98 361.3 292 66.8
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 6.7e-98 361.3 287 67.2
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 1.1e-97 360.5 292 66.8
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.1e-97 360.5 286 67.8
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 2.0e-97 359.8 292 66.4
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 2.0e-97 359.8 292 66.4
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 2.0e-97 359.8 292 66.4
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 3.3e-97 359.0 292 66.4
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 2.2e-96 356.3 290 65.5
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 2.8e-96 355.9 288 67.0
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 2.8e-96 355.9 294 66.7
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 2.8e-96 355.9 294 66.7
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 6.3e-96 354.8 281 68.7
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 8.2e-96 354.4 286 68.9
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 1.1e-95 354.0 288 66.7
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 6.9e-95 351.3 301 63.8
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.2e-94 350.5 286 66.1
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 1.5e-94 350.1 296 62.5
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 7.7e-94 347.8 300 64.0
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 3.8e-93 345.5 297 66.3
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.1e-92 344.0 300 63.3
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 3.2e-92 342.4 297 65.7
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 9.4e-92 340.9 292 64.0
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 3.6e-91 339.0 304 61.8
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 3.3e-89 332.4 297 63.6
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 9.7e-89 330.9 296 63.5
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 9.7e-89 330.9 285 62.8
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.8e-88 329.3 244 70.1
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 3.7e-88 328.9 296 62.5
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 6.5e-85 318.2 291 60.1
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 7.2e-84 314.7 296 59.5
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 2.7e-78 296.2 260 61.9
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 4.0e-74 282.3 294 56.8
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 5.4e-71 271.9 193 75.6
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.5e-68 263.8 282 52.5
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 2.8e-64 249.6 271 53.1
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.6e-62 243.8 215 65.1
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 2.9e-61 239.6 165 73.3
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 3.8e-61 239.2 276 50.4
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 6.8e-58 228.4 272 49.6
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 4.6e-54 215.7 282 44.3
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 9.8e-49 198.0 144 69.4
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 1.4e-47 194.1 269 48.0
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 5.6e-44 182.2 137 70.1
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 6.4e-40 168.7 118 72.9
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 2.1e-35 153.7 152 57.9
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 1.7e-24 117.5 103 58.3
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 6.4e-24 115.5 112 58.0
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 1.4e-23 114.4 84 73.8
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 1.9e-23 114.0 332 26.8
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 6.0e-22 109.0 112 55.4
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 2.1e-19 100.5 98 57.1
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 1.6e-11 74.3 72 54.2
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 5.3e-10 69.3 72 50.0
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.2e-09 68.2 86 51.2


User provided reference genes

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