Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045540 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 3.3e-70 268.5 158 100.0
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 1.2e-51 206.8 151 73.5
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 1.7e-50 203.0 152 71.1
DCAR_001526 Daucus carota HOM05D006429 ORTHO05D008173 2.2e-50 202.6 153 68.6
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 6.5e-50 201.1 156 67.3
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 1.1e-49 200.3 152 69.1
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 1.9e-49 199.5 154 70.1
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 2.5e-49 199.1 154 70.1
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 3.2e-49 198.7 152 69.7
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 4.2e-49 198.4 149 69.1
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 4.2e-49 198.4 152 69.1
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 5.5e-49 198.0 154 68.2
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 7.2e-49 197.6 154 69.5
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 9.4e-49 197.2 155 69.7
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 1.2e-48 196.8 154 69.5
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 2.7e-48 195.7 154 67.5
Ciclev10010827m.g Citrus clementina HOM05D006429 ORTHO05D008173 2.7e-48 195.7 135 74.8
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 4.7e-48 194.9 152 66.4
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 4.7e-48 194.9 152 67.8
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 8.0e-48 194.1 151 66.2
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 3.0e-47 192.2 154 64.9
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 5.2e-47 191.4 152 67.1
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 6.8e-47 191.0 141 70.2
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 6.8e-47 191.0 153 65.4
Lj7A720G77 Lonicera japonica HOM05D006429 ORTHO05D008173 6.8e-47 191.0 159 62.3
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 6.8e-47 191.0 152 65.8
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 8.8e-47 190.7 156 63.5
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 1.5e-46 189.9 147 68.7
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 2.6e-46 189.1 156 63.5
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 2.6e-46 189.1 156 63.5
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 4.4e-46 188.3 137 71.5
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 7.5e-46 187.6 152 64.5
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 9.8e-46 187.2 135 72.6
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 3.7e-45 185.3 156 62.8
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 3.7e-45 185.3 147 63.9
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 1.1e-44 183.7 156 62.2
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 1.1e-44 183.7 152 62.5
PGR044G2505 Punica granatum HOM05D006429 ORTHO05D008173 1.4e-44 183.3 135 71.9
Hund04535 Selenicereus undatus HOM05D006429 ORTHO05D008173 2.4e-44 182.6 148 64.9
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 2.4e-44 182.6 147 63.9
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 3.1e-44 182.2 152 65.8
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 7.0e-44 181.0 142 65.5
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 1.6e-43 179.9 162 58.6
Sc23g0006860 Simmondsia chinensis HOM05D006429 ORTHO05D008173 1.6e-43 179.9 153 63.4
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 2.0e-43 179.5 152 65.8
ClCG05G017010 Citrullus lanatus HOM05D006429 ORTHO05D008173 2.7e-43 179.1 153 62.7
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 3.5e-43 178.7 157 60.5
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 4.5e-43 178.3 142 64.8
Nitab4.5_0005761g0100 Nicotiana tabacum HOM05D006429 ORTHO05D008173 4.5e-43 178.3 138 65.9
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 1.0e-42 177.2 154 60.4
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 1.7e-42 176.4 139 66.2
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 2.2e-42 176.0 143 63.6
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 3.8e-42 175.3 139 65.5
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 3.8e-42 175.3 149 61.7
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 5.0e-42 174.9 149 61.1
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 6.5e-42 174.5 142 64.1
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 6.5e-42 174.5 154 61.7
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 1.9e-41 172.9 152 60.5
unitig_37.g12933 Utricularia gibba HOM05D006429 ORTHO05D008173 2.5e-41 172.6 135 67.4
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 7.2e-41 171.0 135 65.9
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 1.2e-40 170.2 149 61.7
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 1.6e-40 169.9 140 64.3
HPP92_009845 Vanilla planifolia HOM05D006429 ORTHO05D008173 2.1e-40 169.5 135 64.4
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 1.0e-39 167.2 142 61.3
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 3.0e-39 165.6 137 62.0
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 4.0e-39 165.2 138 64.5
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 2.6e-38 162.5 135 62.2
AT2G25530 Arabidopsis thaliana HOM05D006429 ORTHO05D008173 5.7e-38 161.4 134 61.9
Thhalv10000103m.g Eutrema salsugineum HOM05D006429 ORTHO05D008173 1.3e-37 160.2 134 61.9
BcaC07g40864 Brassica carinata HOM05D006429 ORTHO05D008173 2.8e-37 159.1 134 61.2
A09p55620 Brassica napus HOM05D006429 ORTHO05D008173 2.8e-37 159.1 134 61.2
C08p38620 Brassica napus HOM05D006429 ORTHO05D008173 2.8e-37 159.1 134 61.2
BolC8t51433H Brassica oleracea HOM05D006429 ORTHO05D008173 2.8e-37 159.1 134 61.2
BraA09t40964Z Brassica rapa HOM05D006429 ORTHO05D008173 2.8e-37 159.1 134 61.2
Migut.E01793 Erythranthe guttata HOM05D006429 ORTHO05D008173 2.8e-37 159.1 139 63.3
Carub.0004s0522 Capsella rubella HOM05D006429 ORTHO05D008173 3.7e-37 158.7 134 61.2
Eucgr.C02795 Eucalyptus grandis HOM05D006429 ORTHO05D008173 3.7e-37 158.7 120 71.7
CARHR115890 Cardamine hirsuta HOM05D006429 ORTHO05D008173 8.3e-37 157.5 134 61.2
Aa31LG4G9870 Aethionema arabicum HOM05D006429 ORTHO05D008173 1.8e-36 156.4 134 60.4
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 4.1e-36 155.2 134 59.7
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 1.6e-35 153.3 138 61.6
Sp4g04810 Schrenkiella parvula HOM05D006429 ORTHO05D008173 2.7e-35 152.5 134 59.0
Os03g0851900 Oryza sativa ssp. japonica HOM05D006429 ORTHO05D008173 5.9e-35 151.4 145 56.6
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 1.7e-34 149.8 116 68.1
Lsat_1_v5_gn_6_22441 Lactuca sativa HOM05D006429 ORTHO05D008173 6.6e-34 147.9 135 60.0
Haze_21537 Corylus avellana HOM05D006429 ORTHO05D008173 1.9e-33 146.4 111 70.3
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 4.3e-33 145.2 111 70.3
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 1.6e-32 143.3 113 67.3
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 4.7e-32 141.7 113 65.5
SEGI_12197 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 1.0e-31 140.6 140 58.6
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 2.6e-30 136.0 112 64.3
Mapoly0085s0040 Marchantia polymorpha HOM05D006429 ORTHO05D008173 3.2e-28 129.0 140 52.9
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 4.1e-28 128.6 111 62.2
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 9.5e-25 117.5 79 73.4
SMO228G0075 Selaginella moellendorffii HOM05D006429 ORTHO05D008173 4.7e-24 115.2 123 52.8
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis HOM05D006429 ORTHO05D008173 1.6e-19 100.1 136 47.1
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 2.7e-19 99.4 57 86.0
CDE02G3972 Ceratophyllum demersum HOM05D006429 ORTHO05D008173 2.5e-17 92.8 67 67.2
Actinidia14610 Actinidia chinensis HOM05D006429 ORTHO05D008173 5.6e-17 91.7 93 57.0
AUR62032544 Chenopodium quinoa HOM05D006429 ORTHO05D008173 2.3e-15 86.3 45 91.1
Cre08.g360850 Chlamydomonas reinhardtii HOM05D006429 ORTHO05D008173 2.6e-14 82.8 129 43.4
PRCOL_00004860 Prasinoderma coloniale HOM05D006429 ORTHO05D008173 4.6e-11 72.0 124 39.5
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 6.2e-08 61.6 32 84.4


User provided reference genes

Program Settings