Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045499 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.9e-31 139.0 100 100.0
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.7e-24 115.9 57 96.5
CSS0035081 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 6.6e-24 114.0 57 94.7
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.1e-15 86.7 43 93.0
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 6.0e-09 64.3 38 78.9
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 6.0e-09 64.3 39 79.5
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 1.8e-08 62.8 38 78.9
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 6.7e-08 60.8 38 78.9
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 1.5e-07 59.7 38 73.7
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 2.5e-07 58.9 38 68.4
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 2.5e-07 58.9 37 78.4
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 7.4e-07 57.4 47 63.8
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 9.6e-07 57.0 38 73.7
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 9.6e-07 57.0 38 71.1
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 9.6e-07 57.0 38 71.1
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 9.6e-07 57.0 38 71.1
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 1.3e-06 56.6 51 62.7
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 1.3e-06 56.6 38 71.1
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 71.1
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 73.7
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 71.1
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 2.8e-06 55.5 38 71.1
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 3.7e-06 55.1 38 68.4
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 4.8e-06 54.7 38 68.4
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.2e-06 54.3 38 68.4
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.2e-06 54.3 38 68.4
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.2e-06 54.3 38 68.4
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.2e-06 54.3 38 68.4
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 8.2e-06 53.9 37 73.0
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 8.2e-06 53.9 37 70.3
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 8.2e-06 53.9 38 68.4
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 8.2e-06 53.9 38 65.8


User provided reference genes

Program Settings