Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 1.9e-213 745.7 415 100.0
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.1e-128 464.2 429 66.2
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 7.8e-127 458.0 332 71.4
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 1.9e-117 426.8 309 70.9
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.8e-115 420.2 300 71.0
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 5.2e-115 418.7 436 58.3
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.4e-112 409.8 263 76.4
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 3.2e-112 409.5 216 87.5
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 7.1e-112 408.3 327 66.4
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 7.1e-112 408.3 246 78.5
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.2e-111 407.5 267 73.8
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.6e-111 407.1 267 73.4
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 2.1e-111 406.8 248 79.8
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 2.1e-111 406.8 309 67.6
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.1e-111 406.8 254 74.8
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 2.1e-111 406.8 254 74.4
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.7e-111 406.4 254 74.0
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 3.0e-110 402.9 257 74.7
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 5.1e-110 402.1 246 82.5
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 8.6e-110 401.4 254 76.4
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 3.3e-109 399.4 248 77.0
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 7.3e-109 398.3 258 75.2
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 7.3e-109 398.3 262 73.3
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 1.6e-108 397.1 332 62.7
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 2.1e-108 396.7 259 73.4
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 2.8e-108 396.4 301 66.8
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 6.2e-108 395.2 300 68.0
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 8.1e-108 394.8 306 66.3
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 8.1e-108 394.8 258 72.9
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.1e-107 394.4 243 76.1
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 1.4e-107 394.0 253 77.5
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.4e-107 394.0 258 74.4
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 4.0e-107 392.5 304 69.1
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.0e-106 390.2 252 74.2
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 7.6e-106 388.3 257 73.5
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 3.8e-105 386.0 255 71.8
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 4.9e-105 385.6 312 62.2
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 1.4e-104 384.0 319 62.1
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.4e-104 384.0 248 73.8
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 1.9e-104 383.6 309 63.4
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 3.2e-104 382.9 262 70.6
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 1.6e-103 380.6 245 73.1
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 4.6e-103 379.0 220 80.5
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 4.6e-103 379.0 265 71.3
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 4.6e-103 379.0 234 76.1
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 7.8e-103 378.3 258 72.5
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.7e-102 377.1 260 70.4
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 3.0e-102 376.3 241 73.9
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 3.9e-102 375.9 268 69.0
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 3.9e-102 375.9 205 83.9
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 5.1e-102 375.6 242 74.0
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 6.6e-102 375.2 205 83.9
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 6.6e-102 375.2 205 83.9
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 6.6e-102 375.2 205 83.9
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 8.7e-102 374.8 261 69.3
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.1e-101 374.4 219 81.7
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.1e-101 374.4 219 80.8
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.1e-101 374.4 262 69.5
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 1.1e-101 374.4 216 81.0
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.5e-101 374.0 205 83.9
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 4.3e-101 372.5 312 60.9
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 7.3e-101 371.7 257 69.3
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 9.6e-101 371.3 255 72.9
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 2.8e-100 369.8 219 79.9
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 6.2e-100 368.6 224 75.4
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 1.8e-99 367.1 218 79.8
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 3.1e-99 366.3 219 78.5
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 5.3e-99 365.5 219 79.5
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 5.3e-99 365.5 243 72.4
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 6.9e-99 365.2 234 73.5
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 6.9e-99 365.2 204 80.9
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 1.2e-98 364.4 242 72.7
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.2e-98 364.4 216 80.1
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 4.5e-98 362.5 219 78.1
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 9.9e-98 361.3 251 66.5
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.3e-97 360.9 266 67.7
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.7e-97 360.5 213 79.8
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.7e-97 360.5 242 73.1
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 4.9e-97 359.0 239 68.6
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 6.4e-97 358.6 216 77.8
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.4e-96 357.5 232 73.3
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.9e-96 357.1 215 78.1
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.9e-96 357.1 216 78.2
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 3.2e-96 356.3 259 65.6
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 4.2e-96 355.9 242 71.9
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 7.1e-96 355.1 216 77.8
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 9.3e-96 354.8 204 77.9
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 2.1e-95 353.6 216 76.4
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 2.7e-95 353.2 263 66.9
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 3.5e-95 352.8 204 77.0
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 4.6e-95 352.4 262 65.6
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 6.0e-95 352.1 215 75.8
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 7.9e-95 351.7 204 77.5
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 7.9e-95 351.7 204 77.5
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 7.9e-95 351.7 204 77.5
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 7.9e-95 351.7 204 77.5
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 7.9e-95 351.7 204 77.5
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 1.0e-94 351.3 266 65.8
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.0e-94 351.3 244 69.3
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 2.3e-94 350.1 194 81.4
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 5.1e-94 349.0 194 81.4
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.1e-93 347.8 205 75.6
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.5e-93 347.4 205 77.6
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.5e-93 347.4 205 77.6
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 3.3e-93 346.3 205 75.1
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 3.3e-93 346.3 205 75.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 4.3e-93 345.9 205 75.6
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.6e-92 344.0 264 63.6
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 6.2e-92 342.0 259 64.9
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 3.1e-91 339.7 195 79.5
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 9.0e-91 338.2 210 72.9
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 5.8e-90 335.5 352 58.0
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 8.4e-89 331.6 252 64.3
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.7e-87 326.6 211 72.0
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 6.0e-87 325.5 247 61.1
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.0e-86 324.7 211 71.6
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.8e-86 323.9 322 59.6
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.3e-86 323.6 205 70.2
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.1e-84 317.0 237 62.9
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.1e-80 304.7 261 55.2
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.7e-76 289.7 162 80.2
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 4.8e-76 289.3 259 53.7
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 6.5e-73 278.9 160 78.1
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 8.5e-73 278.5 237 57.4
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.2e-71 274.6 162 72.8
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.6e-71 273.1 151 82.1
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 1.0e-70 271.6 146 87.7
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 7.7e-66 255.4 145 80.0
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.5e-61 241.1 202 56.4
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 5.5e-56 222.6 122 80.3
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 1.2e-50 204.9 152 64.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 4.7e-47 193.0 156 60.9
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 2.2e-44 184.1 185 48.1
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.1e-32 145.2 117 56.4
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.7e-25 121.3 83 61.4
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.5e-24 117.5 149 45.6
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.6e-21 107.5 145 45.5
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 1.3e-20 105.1 127 52.0
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 5.4e-19 99.8 121 51.2
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 2.0e-18 97.8 144 47.2
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 3.5e-18 97.1 108 53.7
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.0e-17 95.5 62 75.8
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 7.5e-13 79.3 87 52.9
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 1.3e-09 68.6 91 48.4
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 2.3e-06 57.8 45 57.8


User provided reference genes

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