Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 8.2e-194 680.6 463 100.0
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 5.9e-83 312.4 497 45.7
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 5.5e-65 252.7 477 43.8
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 6.8e-63 245.7 419 52.3
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 2.0e-43 181.0 468 35.7
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 3.6e-40 170.2 448 36.4
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 8.3e-37 159.1 225 56.9
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 2.1e-35 154.5 518 32.6
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 6.0e-35 152.9 518 32.4
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 7.8e-27 125.9 491 30.3
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.1e-24 117.9 472 30.1
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 2.4e-20 104.4 441 31.3
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 4.2e-20 103.6 471 30.4
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 2.7e-19 100.9 478 28.0
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 3.0e-18 97.4 225 39.1
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.5e-17 95.1 440 30.0
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 5.6e-17 93.2 474 27.0
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 2.1e-16 91.3 223 39.9
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 2.8e-16 90.9 480 28.5
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 4.8e-16 90.1 489 38.7
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 1.8e-15 88.2 477 28.1
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 5.3e-15 86.7 471 27.2
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 2.6e-14 84.3 489 38.2
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 3.4e-14 84.0 418 29.2
Actinidia16749 Actinidia chinensis HOM05D014645 ORTHO05D009761 4.5e-14 83.6 228 44.7
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 7.6e-14 82.8 471 25.3
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.3e-13 82.0 478 29.1
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 2.9e-13 80.9 437 27.0
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 3.8e-13 80.5 471 26.1
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 3.8e-13 80.5 176 47.2
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 5.4e-12 76.6 156 35.9
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 7.1e-12 76.3 479 24.6
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 2.7e-11 74.3 440 42.5
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.7e-11 74.3 143 38.5
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.7e-11 74.3 143 38.5
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 6.0e-11 73.2 99 40.4
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 6.0e-11 73.2 471 27.0
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 7.9e-11 72.8 138 42.0
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 1.0e-10 72.4 468 29.3
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.0e-10 72.4 139 39.6
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 1.8e-10 71.6 166 36.7
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 3.0e-10 70.9 155 36.1
Sopen03g001860 Solanum pennellii HOM05D012094 ORTHO05D011876 3.9e-10 70.5 148 38.5
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 3.9e-10 70.5 474 25.1
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 6.7e-10 69.7 162 34.0
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.1e-09 68.9 466 25.5
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 1.5e-09 68.6 186 34.9
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 3.3e-09 67.4 110 43.6
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 4.3e-09 67.0 469 26.4
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 9.6e-09 65.9 474 27.2
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 2.1e-08 64.7 141 32.6
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 2.8e-08 64.3 141 32.6
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 3.7e-08 63.9 141 32.6
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 4.8e-08 63.5 144 34.7
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 6.2e-08 63.2 164 32.9
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 8.1e-08 62.8 440 26.6
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 1.1e-07 62.4 485 23.7
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.1e-07 62.4 199 37.7
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 1.1e-07 62.4 477 26.0
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 1.4e-07 62.0 468 24.6
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 1.8e-07 61.6 110 39.1
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 2.4e-07 61.2 140 35.7
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 2.4e-07 61.2 98 38.8
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 3.1e-07 60.8 102 46.1
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 3.1e-07 60.8 444 24.5
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 4.0e-07 60.5 472 26.9
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 5.3e-07 60.1 143 33.6
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.5e-06 58.5 143 36.4
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 2.6e-06 57.8 507 25.2
PSO675G7770 Papaver somniferum HOM05D022831 ORTHO05D023597 3.4e-06 57.4 97 37.1
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 4.5e-06 57.0 52 51.9
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 7.6e-06 56.2 140 35.0


User provided reference genes

Program Settings